| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is nodX [H]
Identifier: 114798548
GI number: 114798548
Start: 1310833
End: 1311858
Strand: Direct
Name: nodX [H]
Synonym: HNE_1281
Alternate gene names: 114798548
Gene position: 1310833-1311858 (Clockwise)
Preceding gene: 114800436
Following gene: 114798546
Centisome position: 35.38
GC content: 64.72
Gene sequence:
>1026_bases ATGCCGCCATTGGCGAACCGGTTTGATTTCATTCGCCTGATGCTGGCCGCTGGCGTGTTCGTCTATCATGGCGTGGCAAT CGGGACGGCTGTGCCTTTCGGCGGGGCAGAGCTGGCCTTGGCGCAGCTGGCTGACATTTCCATTCAGGGCTTCTTTATCG TGTCGGGCGTGCTGGTCGCCGGATCGCTGGACCGCGCCTCTGGCCTGGATGATTATGCGGGCAAGCGCATCCGCCGGCTT TACCCGGCCTATGCCGCCGTGATCCTCGTGCCCGCACTGATCAGCCTTCTGCTGACCTGGGACATTGGCGGCGTTGCCAG CTATCTGGGGGCAAACCTTGTCTTCCTGAACTTCCTGTCGCCGTCATTGCCCGGCCTGTTCGAGGATAATCGCTTCACGG CCGTCAATGGCGCGCTGTGGACCCTGAAGATCGAGGTGCTGTTCTATCTTGTCCTGCCGCTGATCCTCTTTGTGCTGAAC AGGATGAAGGCGCTGTGGTGGGTGGGGATCATCGCGCTCTATCTGGGCGGCGAGCTTTGGGCGCATTTTGTGCCGCAACT CGGCCCGGAGCTGTATGGCGCCGAGCTTGGCCGCCAGCTGCCGGGCCAGATGGCATTCTTCGCGATGGGGATCGCGCTGT GGAAAGCCTCGCCCGGCATTCAGAGCCGCTGGAGGGCAATGGCGCTCTGCGGCACAGCGCTGCTGGGGGCAACGTTCCTG CATCCGGCGCTGGAGCCGCTGCGCGCCTTTGCGCTGGCCGGCGTGATCGGCGCGGTGGCCTGGGCACCGGGGCCAAAGCT GAATGTGGCCCGGTTCGGCGATGTCAGCTACGGGCTCTATATTACCCATTTCCCGATCCTTCAGGCGCTGGCGGCGGCGG GCCTGGCGACCAGCCTCGGCCTCGCCGGGTTCTTCGCCCTTGCGACAGCGCTGACCCTCGCGGCCAGCCTTGCGCTGTGG CACCTTGTGGAGAAGCCCGCCTTGCGCCCATCGAGCCACTATCGCAGGGTGGCGGCAGAGACTTGA
Upstream 100 bases:
>100_bases CTGAAGCGCGTAATTTCCGCAGGCTCTGGCAGCGGCAAGGCTGGACATTTGCGACGGTCTGCCTTGGATGGCCCCGCAAG ATGTTCAGAGTTTCAAGATG
Downstream 100 bases:
>100_bases GAACAGGAAATTCCCATGCGTGACGCGGTATATGATCTGATCCGGTTTGAAGCGACCGAAGAAGGGCTGGCGGTTGTGAC GCTGCACCGGCCCGATGTGC
Product: acyltransferase family protein
Products: NA
Alternate protein names: Nodulation protein X; Probable sugar acetylase [H]
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MPPLANRFDFIRLMLAAGVFVYHGVAIGTAVPFGGAELALAQLADISIQGFFIVSGVLVAGSLDRASGLDDYAGKRIRRL YPAYAAVILVPALISLLLTWDIGGVASYLGANLVFLNFLSPSLPGLFEDNRFTAVNGALWTLKIEVLFYLVLPLILFVLN RMKALWWVGIIALYLGGELWAHFVPQLGPELYGAELGRQLPGQMAFFAMGIALWKASPGIQSRWRAMALCGTALLGATFL HPALEPLRAFALAGVIGAVAWAPGPKLNVARFGDVSYGLYITHFPILQALAAAGLATSLGLAGFFALATALTLAASLALW HLVEKPALRPSSHYRRVAAET
Sequences:
>Translated_341_residues MPPLANRFDFIRLMLAAGVFVYHGVAIGTAVPFGGAELALAQLADISIQGFFIVSGVLVAGSLDRASGLDDYAGKRIRRL YPAYAAVILVPALISLLLTWDIGGVASYLGANLVFLNFLSPSLPGLFEDNRFTAVNGALWTLKIEVLFYLVLPLILFVLN RMKALWWVGIIALYLGGELWAHFVPQLGPELYGAELGRQLPGQMAFFAMGIALWKASPGIQSRWRAMALCGTALLGATFL HPALEPLRAFALAGVIGAVAWAPGPKLNVARFGDVSYGLYITHFPILQALAAAGLATSLGLAGFFALATALTLAASLALW HLVEKPALRPSSHYRRVAAET >Mature_340_residues PPLANRFDFIRLMLAAGVFVYHGVAIGTAVPFGGAELALAQLADISIQGFFIVSGVLVAGSLDRASGLDDYAGKRIRRLY PAYAAVILVPALISLLLTWDIGGVASYLGANLVFLNFLSPSLPGLFEDNRFTAVNGALWTLKIEVLFYLVLPLILFVLNR MKALWWVGIIALYLGGELWAHFVPQLGPELYGAELGRQLPGQMAFFAMGIALWKASPGIQSRWRAMALCGTALLGATFLH PALEPLRAFALAGVIGAVAWAPGPKLNVARFGDVSYGLYITHFPILQALAAAGLATSLGLAGFFALATALTLAASLALWH LVEKPALRPSSHYRRVAAET
Specific function: Not known. NodX allows Rhizobium leguminosarum biovar viciae strain TOM to nodulate Afghanistan peas [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyltransferase 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002656 [H]
Pfam domain/function: PF01757 Acyl_transf_3 [H]
EC number: NA
Molecular weight: Translated: 36446; Mature: 36314
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPLANRFDFIRLMLAAGVFVYHGVAIGTAVPFGGAELALAQLADISIQGFFIVSGVLVA CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH GSLDRASGLDDYAGKRIRRLYPAYAAVILVPALISLLLTWDIGGVASYLGANLVFLNFLS CCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC PSLPGLFEDNRFTAVNGALWTLKIEVLFYLVLPLILFVLNRMKALWWVGIIALYLGGELW CCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHFVPQLGPELYGAELGRQLPGQMAFFAMGIALWKASPGIQSRWRAMALCGTALLGATFL HHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH HPALEPLRAFALAGVIGAVAWAPGPKLNVARFGDVSYGLYITHFPILQALAAAGLATSLG HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH LAGFFALATALTLAASLALWHLVEKPALRPSSHYRRVAAET HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCC >Mature Secondary Structure PPLANRFDFIRLMLAAGVFVYHGVAIGTAVPFGGAELALAQLADISIQGFFIVSGVLVA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH GSLDRASGLDDYAGKRIRRLYPAYAAVILVPALISLLLTWDIGGVASYLGANLVFLNFLS CCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC PSLPGLFEDNRFTAVNGALWTLKIEVLFYLVLPLILFVLNRMKALWWVGIIALYLGGELW CCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHFVPQLGPELYGAELGRQLPGQMAFFAMGIALWKASPGIQSRWRAMALCGTALLGATFL HHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH HPALEPLRAFALAGVIGAVAWAPGPKLNVARFGDVSYGLYITHFPILQALAAAGLATSLG HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH LAGFFALATALTLAASLALWHLVEKPALRPSSHYRRVAAET HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3419422 [H]