| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is 114798469
Identifier: 114798469
GI number: 114798469
Start: 470057
End: 470674
Strand: Reverse
Name: 114798469
Synonym: HNE_0477
Alternate gene names: NA
Gene position: 470674-470057 (Counterclockwise)
Preceding gene: 114800083
Following gene: 114797539
Centisome position: 12.7
GC content: 68.12
Gene sequence:
>618_bases ATGCCCAGACCCGCCGGCGCGCGCAATCACGACTTTGACGTGAAACGCGCCGCCCTGCTCGACGCGCTGACCGACTTTGC CCTCTCCGCAGACCTGCGCCGCCCGTCGCTGCGCCAGTTCGCCCAGGCGATGAACGCCTCCGAGCCGACCCTGCGCCACT ATTTCGGAGACCGCCGCGGCCTCATCCTCGAAATCCTCGATAATATCGGCCGCAAGGGCGCCCCCCTCTGGGCTGTCGTC GCCCTGCCCTCGGCAAACCCTGCCACCGCTTTCGAGGAATATTTTCGCATCTCCGAAGCGGGCATGCGGCTCGGCGGGTT CATCCGTGCCCACGCTTTCGGCCTGATCGAAGGCCTCGCCGACGAAGCCCTCGGCCAGGCCTATCTCGAGAAGGTGCTCG AGCCCGCCCTGAACGCCGTTTCAGACAAACTCCGCGCCACCCCCGGCGCCCCGCAGGACGAAACCGCCCTGCGCGCCGCT GCGCTGGCCGCCCTCTCCCCGCTCCTCGTCATGAGCCTGCATCAGGAACTCCTCGGCGGCGCCACCTCCGCCCCCATAGA CTCAGGCCAGGTCATCAGCACACTGCAAGGCTGGCTCGGCAAGGCCCTGACGCCTTGA
Upstream 100 bases:
>100_bases CCAACGCAGCCCGCAGGGCTTGCGTTGACCTATATCGTCTCCGGTGTGATGTAGAAAATGCACGCGGCCAGAGCCTGACC GCGCAGGGAGACGTTTTCCG
Downstream 100 bases:
>100_bases GCTGACCTCACCTGACCTGCCCTGCCCCAGAAAGCCGCCTTCACCATGGATCTCCTGAAGCGCCTCGACCTCTCGATCCC GATCATCCAGGCCCCGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MPRPAGARNHDFDVKRAALLDALTDFALSADLRRPSLRQFAQAMNASEPTLRHYFGDRRGLILEILDNIGRKGAPLWAVV ALPSANPATAFEEYFRISEAGMRLGGFIRAHAFGLIEGLADEALGQAYLEKVLEPALNAVSDKLRATPGAPQDETALRAA ALAALSPLLVMSLHQELLGGATSAPIDSGQVISTLQGWLGKALTP
Sequences:
>Translated_205_residues MPRPAGARNHDFDVKRAALLDALTDFALSADLRRPSLRQFAQAMNASEPTLRHYFGDRRGLILEILDNIGRKGAPLWAVV ALPSANPATAFEEYFRISEAGMRLGGFIRAHAFGLIEGLADEALGQAYLEKVLEPALNAVSDKLRATPGAPQDETALRAA ALAALSPLLVMSLHQELLGGATSAPIDSGQVISTLQGWLGKALTP >Mature_204_residues PRPAGARNHDFDVKRAALLDALTDFALSADLRRPSLRQFAQAMNASEPTLRHYFGDRRGLILEILDNIGRKGAPLWAVVA LPSANPATAFEEYFRISEAGMRLGGFIRAHAFGLIEGLADEALGQAYLEKVLEPALNAVSDKLRATPGAPQDETALRAAA LAALSPLLVMSLHQELLGGATSAPIDSGQVISTLQGWLGKALTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21862; Mature: 21731
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRPAGARNHDFDVKRAALLDALTDFALSADLRRPSLRQFAQAMNASEPTLRHYFGDRRG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHCCCCC LILEILDNIGRKGAPLWAVVALPSANPATAFEEYFRISEAGMRLGGFIRAHAFGLIEGLA HHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEALGQAYLEKVLEPALNAVSDKLRATPGAPQDETALRAAALAALSPLLVMSLHQELLGG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC ATSAPIDSGQVISTLQGWLGKALTP CCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure PRPAGARNHDFDVKRAALLDALTDFALSADLRRPSLRQFAQAMNASEPTLRHYFGDRRG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHCCCCC LILEILDNIGRKGAPLWAVVALPSANPATAFEEYFRISEAGMRLGGFIRAHAFGLIEGLA HHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEALGQAYLEKVLEPALNAVSDKLRATPGAPQDETALRAAALAALSPLLVMSLHQELLGG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC ATSAPIDSGQVISTLQGWLGKALTP CCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA