Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is acrR [C]

Identifier: 114798460

GI number: 114798460

Start: 1274155

End: 1274775

Strand: Direct

Name: acrR [C]

Synonym: HNE_1250

Alternate gene names: 114798460

Gene position: 1274155-1274775 (Clockwise)

Preceding gene: 114797529

Following gene: 114799664

Centisome position: 34.39

GC content: 54.27

Gene sequence:

>621_bases
ATGGCGAACGAACATTCCGGAAAAATTGAAAGAAGGTCTCAAAAGGACCGGAGCGAAAGCATGCAGAGGCGCGTGCTTGA
CGCTACTTTGCGATGTATTGGCGAGCAGGGGTATATCGGCGTTTCGCTACAGGATATTGCGGACATGGCGGGGGTTTCCC
GCGGGGCAATTACCCATCATTACTCCAGCAAGATCGAGCTGACATCGTCGGCCATCCAGCATTTCGTTCAGTGGCGGTAT
GACCGGGTGCATACGGCCTTCGAGGGTAAGGGTGGCCTTCCCTTGCAGGAGCGCCTGGATATTCTCTGGAAGGAGTTTCA
GGAGATCTTTCCGGTCACCTTCGAGCTGATCGTGGCGCTCCGGTCCGACAAGGATCTGCTGGCGCTTTATAAGCGCAATT
CAAAGACGCGGATCGAGGAAATCACCACCGGATATGATGGTTTCTTCCCGGAGCTTTCTGGGATGAATGTTTCTGGTGTC
ATGATTGCGGTGATGGCGGCCTTCTATCGCGGCGCCTACATTGAGGCGGTGTCGCGCGACGCCGAGTATATCGAGCAGAT
GAAGGTGGTCTTTCAGGATATGTTGATGACCTATCTGGACTCTGACAAGAAAGCGGCCTGA

Upstream 100 bases:

>100_bases
CTGCCCACTTTGCGTATTGTAATACGTAGAATCCCTTAGTGATTGGATTGGGTTTGGGATCACTCAGGGCGAATTCTGCA
ACTCATCTGGAGATCATCAG

Downstream 100 bases:

>100_bases
CCGGGCTGTTCGACAAACGGCTCAATCGAACGGGTTGTCGCCATAAACCGTGCGCCCGGTGCGTTTCTCGACTTCGCCGT
CCATGCGGCCGCAGATCGTC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator TetR

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MANEHSGKIERRSQKDRSESMQRRVLDATLRCIGEQGYIGVSLQDIADMAGVSRGAITHHYSSKIELTSSAIQHFVQWRY
DRVHTAFEGKGGLPLQERLDILWKEFQEIFPVTFELIVALRSDKDLLALYKRNSKTRIEEITTGYDGFFPELSGMNVSGV
MIAVMAAFYRGAYIEAVSRDAEYIEQMKVVFQDMLMTYLDSDKKAA

Sequences:

>Translated_206_residues
MANEHSGKIERRSQKDRSESMQRRVLDATLRCIGEQGYIGVSLQDIADMAGVSRGAITHHYSSKIELTSSAIQHFVQWRY
DRVHTAFEGKGGLPLQERLDILWKEFQEIFPVTFELIVALRSDKDLLALYKRNSKTRIEEITTGYDGFFPELSGMNVSGV
MIAVMAAFYRGAYIEAVSRDAEYIEQMKVVFQDMLMTYLDSDKKAA
>Mature_205_residues
ANEHSGKIERRSQKDRSESMQRRVLDATLRCIGEQGYIGVSLQDIADMAGVSRGAITHHYSSKIELTSSAIQHFVQWRYD
RVHTAFEGKGGLPLQERLDILWKEFQEIFPVTFELIVALRSDKDLLALYKRNSKTRIEEITTGYDGFFPELSGMNVSGVM
IAVMAAFYRGAYIEAVSRDAEYIEQMKVVFQDMLMTYLDSDKKAA

Specific function: Potential Regulator Protein For The Acrab Genes. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23490; Mature: 23359

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANEHSGKIERRSQKDRSESMQRRVLDATLRCIGEQGYIGVSLQDIADMAGVSRGAITHH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHCCCCCCHHHH
YSSKIELTSSAIQHFVQWRYDRVHTAFEGKGGLPLQERLDILWKEFQEIFPVTFELIVAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RSDKDLLALYKRNSKTRIEEITTGYDGFFPELSGMNVSGVMIAVMAAFYRGAYIEAVSRD
CCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AEYIEQMKVVFQDMLMTYLDSDKKAA
HHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ANEHSGKIERRSQKDRSESMQRRVLDATLRCIGEQGYIGVSLQDIADMAGVSRGAITHH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHCCCCCCHHHH
YSSKIELTSSAIQHFVQWRYDRVHTAFEGKGGLPLQERLDILWKEFQEIFPVTFELIVAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RSDKDLLALYKRNSKTRIEEITTGYDGFFPELSGMNVSGVMIAVMAAFYRGAYIEAVSRD
CCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AEYIEQMKVVFQDMLMTYLDSDKKAA
HHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA