| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is acrR [C]
Identifier: 114798460
GI number: 114798460
Start: 1274155
End: 1274775
Strand: Direct
Name: acrR [C]
Synonym: HNE_1250
Alternate gene names: 114798460
Gene position: 1274155-1274775 (Clockwise)
Preceding gene: 114797529
Following gene: 114799664
Centisome position: 34.39
GC content: 54.27
Gene sequence:
>621_bases ATGGCGAACGAACATTCCGGAAAAATTGAAAGAAGGTCTCAAAAGGACCGGAGCGAAAGCATGCAGAGGCGCGTGCTTGA CGCTACTTTGCGATGTATTGGCGAGCAGGGGTATATCGGCGTTTCGCTACAGGATATTGCGGACATGGCGGGGGTTTCCC GCGGGGCAATTACCCATCATTACTCCAGCAAGATCGAGCTGACATCGTCGGCCATCCAGCATTTCGTTCAGTGGCGGTAT GACCGGGTGCATACGGCCTTCGAGGGTAAGGGTGGCCTTCCCTTGCAGGAGCGCCTGGATATTCTCTGGAAGGAGTTTCA GGAGATCTTTCCGGTCACCTTCGAGCTGATCGTGGCGCTCCGGTCCGACAAGGATCTGCTGGCGCTTTATAAGCGCAATT CAAAGACGCGGATCGAGGAAATCACCACCGGATATGATGGTTTCTTCCCGGAGCTTTCTGGGATGAATGTTTCTGGTGTC ATGATTGCGGTGATGGCGGCCTTCTATCGCGGCGCCTACATTGAGGCGGTGTCGCGCGACGCCGAGTATATCGAGCAGAT GAAGGTGGTCTTTCAGGATATGTTGATGACCTATCTGGACTCTGACAAGAAAGCGGCCTGA
Upstream 100 bases:
>100_bases CTGCCCACTTTGCGTATTGTAATACGTAGAATCCCTTAGTGATTGGATTGGGTTTGGGATCACTCAGGGCGAATTCTGCA ACTCATCTGGAGATCATCAG
Downstream 100 bases:
>100_bases CCGGGCTGTTCGACAAACGGCTCAATCGAACGGGTTGTCGCCATAAACCGTGCGCCCGGTGCGTTTCTCGACTTCGCCGT CCATGCGGCCGCAGATCGTC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator TetR
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MANEHSGKIERRSQKDRSESMQRRVLDATLRCIGEQGYIGVSLQDIADMAGVSRGAITHHYSSKIELTSSAIQHFVQWRY DRVHTAFEGKGGLPLQERLDILWKEFQEIFPVTFELIVALRSDKDLLALYKRNSKTRIEEITTGYDGFFPELSGMNVSGV MIAVMAAFYRGAYIEAVSRDAEYIEQMKVVFQDMLMTYLDSDKKAA
Sequences:
>Translated_206_residues MANEHSGKIERRSQKDRSESMQRRVLDATLRCIGEQGYIGVSLQDIADMAGVSRGAITHHYSSKIELTSSAIQHFVQWRY DRVHTAFEGKGGLPLQERLDILWKEFQEIFPVTFELIVALRSDKDLLALYKRNSKTRIEEITTGYDGFFPELSGMNVSGV MIAVMAAFYRGAYIEAVSRDAEYIEQMKVVFQDMLMTYLDSDKKAA >Mature_205_residues ANEHSGKIERRSQKDRSESMQRRVLDATLRCIGEQGYIGVSLQDIADMAGVSRGAITHHYSSKIELTSSAIQHFVQWRYD RVHTAFEGKGGLPLQERLDILWKEFQEIFPVTFELIVALRSDKDLLALYKRNSKTRIEEITTGYDGFFPELSGMNVSGVM IAVMAAFYRGAYIEAVSRDAEYIEQMKVVFQDMLMTYLDSDKKAA
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23490; Mature: 23359
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANEHSGKIERRSQKDRSESMQRRVLDATLRCIGEQGYIGVSLQDIADMAGVSRGAITHH CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHCCCCCCHHHH YSSKIELTSSAIQHFVQWRYDRVHTAFEGKGGLPLQERLDILWKEFQEIFPVTFELIVAL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RSDKDLLALYKRNSKTRIEEITTGYDGFFPELSGMNVSGVMIAVMAAFYRGAYIEAVSRD CCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AEYIEQMKVVFQDMLMTYLDSDKKAA HHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ANEHSGKIERRSQKDRSESMQRRVLDATLRCIGEQGYIGVSLQDIADMAGVSRGAITHH CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHCCCCCCHHHH YSSKIELTSSAIQHFVQWRYDRVHTAFEGKGGLPLQERLDILWKEFQEIFPVTFELIVAL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RSDKDLLALYKRNSKTRIEEITTGYDGFFPELSGMNVSGVMIAVMAAFYRGAYIEAVSRD CCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AEYIEQMKVVFQDMLMTYLDSDKKAA HHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA