| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798425
Identifier: 114798425
GI number: 114798425
Start: 3398617
End: 3400053
Strand: Direct
Name: 114798425
Synonym: HNE_3230
Alternate gene names: NA
Gene position: 3398617-3400053 (Clockwise)
Preceding gene: 114799645
Following gene: 114797653
Centisome position: 91.73
GC content: 67.29
Gene sequence:
>1437_bases ATGAGCCGGTTTTTTCTTTTCATTTTCGTCCTTCTGCTGATTTCCATCGGCGCAGTGCTGGCCTGGTGGGCCTTCAGCCT GCCCGGTGAAGTCACTTTCCCTGTGGGTCAGGAGATTGTTTCGGTCCGCGCCGGCGTGGCGGCGATCCTGCTGCTGGTGT TTGGTGGCCTGATTGCGCTCGCCTGGTGGCTGGCAACCGGCATCCTTGTGCTGCCGGGGCGCATCTCCAAGGCCCAGCGC CTCTCCCGCGCCCGCAAGGCCAATGCCGCGCTCGCTGAAGGCTTGCTGGCGGCAGAAGGCGGCGATTCCAAAGCCGCGCT TCGCCTCGCCAGGAAATCCATGCGCCACGCGGAAGATGAGCGCCTGAAGCTGCTGCTGGAAGCGCGCGCCGCCGAGGCCA ATGATGACTGGGCCGGCGCCGAGCGCGCCTGGGGCCTGCTCACCCGTCTGCCGGGCGGACAGCTTGCCGGCCTGCGCGGC TCCGCCACCGCCGCCTCCGAACGCGGCGACCCCCTCACGGCCGAAACCCGCGCCCGCGAAGCCCTTGAACTGCGCTCCGA CGCAGACTGGCCGTTCAACTCCCTGTTCGACATCCAGGTCGCCAAGGGCGACTGGGACAAGGCGCTCGATACCCTCGCCA TGGGCGAGAAGCGCGGCCTCGTCGAAGGTATCAACCTCAAACGTCGCCGCGCCGTGCTCTTCACCGCGCGCGCTGTAAAC CTGCCTATCGCGGAAAAACCCGCCGCCCAGAAATCCCTGGCCGATGCCATTCGCTCTGCCCCGGACTTCCCTCCCGCCGC GTATCATGGCGCCCGGTTCCTGATGGTCGATGGCAAGGCGAAAGCGGCGCAAGGCGTTTTGGAGCTTGGCTGGAAAGCCC GGCCCCACCCCGCTCTCGCCCAGCTCTCCCGCCGCCTCGTGCCACAGGACACCCGCGAGAACATCGCCGCACGGCTCAAG GCACTTGTGGACGCTCACCCGAGCCATCGCGAGAGCCGCATCCTTGCCGCTGAGCTGTCGATGGACTCCGCCGATTGGGT CGAGGCCATCAAGACGCTCGCCCTGCTGGTTGAAGAAAACCCCACCGCCCGCCTCTGCCTACTCATGGAACGCGCCCTCA AGGGCTATGGCGATCTGGGCGAAGCCCAGCGCTGGGGCCGCATGGCGGTTTCTGCTTCCCGCGAGGCCGACTGGTCAGAC ATCGACCCCAAGGGCGGCGCCTTTGACTATGACCGTCAGGGCTGGGCCCGCCTCGTCTATGCCTTTGGCGATGTCGGCGA GCTGATCCATCCGCGCTATGAAAGCTATGGCCGCGAACTGGAAGCAGGCCGCGTGCTGGCCCTGGCGCACCAGCCCGAAG ACGGCCCCCTCAGCGCCCCCAAACCCCCGCAGGGCCCGCTGACCCAGCCGCTGGATTACGCCCCGGACGAGGACTGA
Upstream 100 bases:
>100_bases CGGCGCAGGACTGGACCCGCGAAGCAAACCGCCGCATCACGCTGGAGGCGGTGCTCGAAGATGTCAGGCTGAGCCTGGTC GAGCCGGAGAACTAAGAAGA
Downstream 100 bases:
>100_bases CACCGAAGCCAAAACCGGCTTGCATGCCAAGGGCCCTGCCAGTATATGCGGGGCCTGCCGAAACGGCATGCCGCTTTAGC TCAGCTGGTAGAGCACATCA
Product: HemY domain-containing protein
Products: NA
Alternate protein names: HemY Domain Protein; HemY-Like; HemY Protein; HemY N-Terminal Domain Protein; Hemy Domain Protein; Signal Peptide; HemY Domain Membrane Protein
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MSRFFLFIFVLLLISIGAVLAWWAFSLPGEVTFPVGQEIVSVRAGVAAILLLVFGGLIALAWWLATGILVLPGRISKAQR LSRARKANAALAEGLLAAEGGDSKAALRLARKSMRHAEDERLKLLLEARAAEANDDWAGAERAWGLLTRLPGGQLAGLRG SATAASERGDPLTAETRAREALELRSDADWPFNSLFDIQVAKGDWDKALDTLAMGEKRGLVEGINLKRRRAVLFTARAVN LPIAEKPAAQKSLADAIRSAPDFPPAAYHGARFLMVDGKAKAAQGVLELGWKARPHPALAQLSRRLVPQDTRENIAARLK ALVDAHPSHRESRILAAELSMDSADWVEAIKTLALLVEENPTARLCLLMERALKGYGDLGEAQRWGRMAVSASREADWSD IDPKGGAFDYDRQGWARLVYAFGDVGELIHPRYESYGRELEAGRVLALAHQPEDGPLSAPKPPQGPLTQPLDYAPDED
Sequences:
>Translated_478_residues MSRFFLFIFVLLLISIGAVLAWWAFSLPGEVTFPVGQEIVSVRAGVAAILLLVFGGLIALAWWLATGILVLPGRISKAQR LSRARKANAALAEGLLAAEGGDSKAALRLARKSMRHAEDERLKLLLEARAAEANDDWAGAERAWGLLTRLPGGQLAGLRG SATAASERGDPLTAETRAREALELRSDADWPFNSLFDIQVAKGDWDKALDTLAMGEKRGLVEGINLKRRRAVLFTARAVN LPIAEKPAAQKSLADAIRSAPDFPPAAYHGARFLMVDGKAKAAQGVLELGWKARPHPALAQLSRRLVPQDTRENIAARLK ALVDAHPSHRESRILAAELSMDSADWVEAIKTLALLVEENPTARLCLLMERALKGYGDLGEAQRWGRMAVSASREADWSD IDPKGGAFDYDRQGWARLVYAFGDVGELIHPRYESYGRELEAGRVLALAHQPEDGPLSAPKPPQGPLTQPLDYAPDED >Mature_477_residues SRFFLFIFVLLLISIGAVLAWWAFSLPGEVTFPVGQEIVSVRAGVAAILLLVFGGLIALAWWLATGILVLPGRISKAQRL SRARKANAALAEGLLAAEGGDSKAALRLARKSMRHAEDERLKLLLEARAAEANDDWAGAERAWGLLTRLPGGQLAGLRGS ATAASERGDPLTAETRAREALELRSDADWPFNSLFDIQVAKGDWDKALDTLAMGEKRGLVEGINLKRRRAVLFTARAVNL PIAEKPAAQKSLADAIRSAPDFPPAAYHGARFLMVDGKAKAAQGVLELGWKARPHPALAQLSRRLVPQDTRENIAARLKA LVDAHPSHRESRILAAELSMDSADWVEAIKTLALLVEENPTARLCLLMERALKGYGDLGEAQRWGRMAVSASREADWSDI DPKGGAFDYDRQGWARLVYAFGDVGELIHPRYESYGRELEAGRVLALAHQPEDGPLSAPKPPQGPLTQPLDYAPDED
Specific function: Unknown
COG id: COG3898
COG function: function code S; Uncharacterized membrane-bound protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51964; Mature: 51833
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFFLFIFVLLLISIGAVLAWWAFSLPGEVTFPVGQEIVSVRAGVAAILLLVFGGLIAL CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHH AWWLATGILVLPGRISKAQRLSRARKANAALAEGLLAAEGGDSKAALRLARKSMRHAEDE HHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHH RLKLLLEARAAEANDDWAGAERAWGLLTRLPGGQLAGLRGSATAASERGDPLTAETRARE HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH ALELRSDADWPFNSLFDIQVAKGDWDKALDTLAMGEKRGLVEGINLKRRRAVLFTARAVN HHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHCCCCHHHHEEEEEEHHHC LPIAEKPAAQKSLADAIRSAPDFPPAAYHGARFLMVDGKAKAAQGVLELGWKARPHPALA CCCCCCCHHHHHHHHHHHCCCCCCCCHHCCEEEEEECCCHHHHHHHHHHCCCCCCCHHHH QLSRRLVPQDTRENIAARLKALVDAHPSHRESRILAAELSMDSADWVEAIKTLALLVEEN HHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHCCEEEECCCCCCHHHHHHHHHHHHHHCCC PTARLCLLMERALKGYGDLGEAQRWGRMAVSASREADWSDIDPKGGAFDYDRQGWARLVY CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH AFGDVGELIHPRYESYGRELEAGRVLALAHQPEDGPLSAPKPPQGPLTQPLDYAPDED HHHHHHHHHCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRFFLFIFVLLLISIGAVLAWWAFSLPGEVTFPVGQEIVSVRAGVAAILLLVFGGLIAL CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHH AWWLATGILVLPGRISKAQRLSRARKANAALAEGLLAAEGGDSKAALRLARKSMRHAEDE HHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHH RLKLLLEARAAEANDDWAGAERAWGLLTRLPGGQLAGLRGSATAASERGDPLTAETRARE HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH ALELRSDADWPFNSLFDIQVAKGDWDKALDTLAMGEKRGLVEGINLKRRRAVLFTARAVN HHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHCCCCHHHHEEEEEEHHHC LPIAEKPAAQKSLADAIRSAPDFPPAAYHGARFLMVDGKAKAAQGVLELGWKARPHPALA CCCCCCCHHHHHHHHHHHCCCCCCCCHHCCEEEEEECCCHHHHHHHHHHCCCCCCCHHHH QLSRRLVPQDTRENIAARLKALVDAHPSHRESRILAAELSMDSADWVEAIKTLALLVEEN HHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHCCEEEECCCCCCHHHHHHHHHHHHHHCCC PTARLCLLMERALKGYGDLGEAQRWGRMAVSASREADWSDIDPKGGAFDYDRQGWARLVY CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH AFGDVGELIHPRYESYGRELEAGRVLALAHQPEDGPLSAPKPPQGPLTQPLDYAPDED HHHHHHHHHCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA