| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is yjeE [C]
Identifier: 114798401
GI number: 114798401
Start: 1954374
End: 1954829
Strand: Reverse
Name: yjeE [C]
Synonym: HNE_1887
Alternate gene names: 114798401
Gene position: 1954829-1954374 (Counterclockwise)
Preceding gene: 114798087
Following gene: 114798471
Centisome position: 52.76
GC content: 59.21
Gene sequence:
>456_bases ATGACCGACTCTTTTGTGCTTGAGGATGAAGATGCCACGCTGTCGCTTGGCAAATCGATCGCAGGAATCCTGCGGGTGGG AGACTTTGTGGCGCTGCATGGCGACCTTGGCGCCGGCAAGACGACCCTCACGCGGGGGATTATTCAGGCACTTCTAGGCG GCCAGGAAGAGGTGCCCAGCCCGACTTACACTTTGGTGCAGGTGTATGACGGACCAGACTTTCCGCTTTGGCATTTCGAT CTCTATCGGCTGGAAGACCCCGAAGGGGTGGAGGAACTCGGTTGGGACGAAACGGTTGAAGGGGTTGCGCTGGTAGAGTG GCCCGAACATGCCGGGCGACATCTGCCGCAGGTGCGGCTGGACGTGTTGCTTGAAATTCACGGGGATCAGCGATGCGTGA GACTGGAACCCAAGGGCGAAGGCTGGCAGGAACGGCTGCATGGATTCAGCCACTGA
Upstream 100 bases:
>100_bases ACTTCTAGCGCAGCCCGCAAGCAGTGCAAGCAGGGTCACTCCGTCACATACTGAGGTTAAACCGAGGTTGCGCAAGGTCA GCGCAAGGCTAGGAAGAGGT
Downstream 100 bases:
>100_bases CTCGCGCACGCTTGAGATAGACCGGTTCCTCGCCAGCGCGGGCGATGGATGGGACCGGGCCATTCGCAAACCCCTCAGCC AGGATGCTTCGACCCGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MTDSFVLEDEDATLSLGKSIAGILRVGDFVALHGDLGAGKTTLTRGIIQALLGGQEEVPSPTYTLVQVYDGPDFPLWHFD LYRLEDPEGVEELGWDETVEGVALVEWPEHAGRHLPQVRLDVLLEIHGDQRCVRLEPKGEGWQERLHGFSH
Sequences:
>Translated_151_residues MTDSFVLEDEDATLSLGKSIAGILRVGDFVALHGDLGAGKTTLTRGIIQALLGGQEEVPSPTYTLVQVYDGPDFPLWHFD LYRLEDPEGVEELGWDETVEGVALVEWPEHAGRHLPQVRLDVLLEIHGDQRCVRLEPKGEGWQERLHGFSH >Mature_150_residues TDSFVLEDEDATLSLGKSIAGILRVGDFVALHGDLGAGKTTLTRGIIQALLGGQEEVPSPTYTLVQVYDGPDFPLWHFDL YRLEDPEGVEELGWDETVEGVALVEWPEHAGRHLPQVRLDVLLEIHGDQRCVRLEPKGEGWQERLHGFSH
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=153, Percent_Identity=40.5228758169935, Blast_Score=100, Evalue=7e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 16809; Mature: 16678
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSFVLEDEDATLSLGKSIAGILRVGDFVALHGDLGAGKTTLTRGIIQALLGGQEEVPS CCCCEEEECCCCHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC PTYTLVQVYDGPDFPLWHFDLYRLEDPEGVEELGWDETVEGVALVEWPEHAGRHLPQVRL CCEEEEEEECCCCCCEEEEEEEEECCCCCHHHCCCCCCCCCEEEEECCHHHCCCCCCEEE DVLLEIHGDQRCVRLEPKGEGWQERLHGFSH EEEEEECCCCEEEEECCCCCCHHHHCCCCCC >Mature Secondary Structure TDSFVLEDEDATLSLGKSIAGILRVGDFVALHGDLGAGKTTLTRGIIQALLGGQEEVPS CCCEEEECCCCHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC PTYTLVQVYDGPDFPLWHFDLYRLEDPEGVEELGWDETVEGVALVEWPEHAGRHLPQVRL CCEEEEEEECCCCCCEEEEEEEEECCCCCHHHCCCCCCCCCEEEEECCHHHCCCCCCEEE DVLLEIHGDQRCVRLEPKGEGWQERLHGFSH EEEEEECCCCEEEEECCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA