| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798384
Identifier: 114798384
GI number: 114798384
Start: 980928
End: 982763
Strand: Direct
Name: 114798384
Synonym: HNE_0967
Alternate gene names: NA
Gene position: 980928-982763 (Clockwise)
Preceding gene: 114799642
Following gene: 114799361
Centisome position: 26.48
GC content: 61.49
Gene sequence:
>1836_bases GTGAGCTTGAGATACTGGGTGAGCGTCAGGCCCGCCGGGCCAGCGCCGACAATTGCCAGGGAAGTCCGGTTTGTCGGGCT CATAGAGAGTTATTCTTTGGTTAACGCGACCGTGAAGGTCACACGGTTCGGTAAAAACCCATCTTCATCATGTCCTGTTA GTAACGGTCGCATGAAGATGTCGATAGGCCTGTCAGACGTTGTACTTTTCCCGATCGTTGGGGTCGGGAGATTCAAGCGC CGTGAGACGCCTGACATCCCTGCCTATATGCACCATCGTCTGGTGTCACTACTTACGGTGATGGGCTTCATCAACCTCGT CAATTCTGCCGCAGTTGTGTTCACTCTGTTTGGCACCACCAATACTGCGCTGCTGTTTGGATGGATGATCCCGATCTGGG TTTTTGCGATCTCGCAGATCGCCTGGAGCCGCAGCCGCTGGGACCGTTCGCCCACCCGTCCGGTCCGGGGACGCTTCCTG CGCAAGGCAGAAGTTGCCACCGGCGTTGTCGGCGCCTGGTGGGGTCTGTGCGTGATGCTCGCGCCGGTGGGCGATGTCGG CCTCAAGGTTTCGATGTTTGCCATCGTGTTCGGCATGTGCGCCGGTGTGGTGGCGGTTGTCTCGCCGGTTGCCAACGTGG CGGCCCGCTTCCTGCTGGGCGCGGCGACCACGGCGACGATCGGATTTTTCCTCGCGCCGGTGGGCTTGCCCGCCACCATC GTCATGCTGGGCCTGGTGCTGACGCTTGCCTCGGCGTTTGCCAGCCTCAACGCTTATCGCAACCTGCTGATGGAGATGGA AGCCAAACGCCTGGCCGCTCAGAACCATGAACAGCTGCTCGATGCTGTGACCGCTATTCCCGAAGCCTTCGCTATTTATG ACGCGGCCGGGAATGTCATCATCCAGAACGCCGTTCACCAGCGCTGGTTCCCCAAGGGGATGGAGAAGACAGATTTCCGT CCCGGTACGGAGATGCAGAAAGTTGCCGATGTTGGCGGCGTGATGCGCTCCTGTGTGCCGACGAGTTCGGGTGGGCGGGT TATTATCCATACGGACGTTTCCAAGATGGAAGAGCTGCGTCAGGAAGCTGACGAGTCCCGCCGCGACGCCGAAGAAGCGC GCCTGGCTGTGGAGCGTTTCGTCGGCTCGGTGACGCGCGAACTGCGCCTGCCGCTGCGCACCCTGCGCACGATTGCCTCG CGCTTTGAAACGCGCAGCCAGATCCCGTTCGACGATAATGAAGTGCGCCTCTCCAGCGACAAGATGGTCAGCTTTGCCGA CCAGGCGCTCAGCCTCGTGGACGAAGTGCTCTCGATCACGCAGGGCGGCGACAGCATTGTCGACGGCGCCGATGTATCGT TGAAATCGACGCTGGCGCAGGTCATCACCCAGAAGCATTCGGCCATCACGACGCTTGGCGTCGACATTGATGAGCCCAGC GGCCAGGACGCGATGATCGACAGTGCCAAGGCGGCGCGTGTTCTCTCGCGCGTGTTCTCGGCGGTGCTGCTTGAGCTTGG CCAGGTGTGCCGGGGCGGCGGGTCCCTGCGTGTGCGCTGCGGTGTGCGCGGTGAACAGGGCTGGGTCTCGGTCGAGGCGG CAAAGCTCGCCAATGGCAAGATGCAGTCGGAGCTGACTGAGGACTATCTCGCCGAAAGCTCAGAGAACCGGCTTGTGTGG CGCGCGCTGATGCAGACCATCGGTGGACAGATCGAAATGCGCGAAGCGCGCAACGGGTCCATCGTCTACATCCTGAAGTT CAACACCAACGCCACGTCGACCAAGTTGGGCGATGCCGAGGCGCTGGCGCGCCCGCATTCGGGACGCGCCGCTTAA
Upstream 100 bases:
>100_bases GCACGTTCCCATCTCGGCGATCAGGTCGCCAAGGTCCATGCTGTCTGATTTTCCGCCGATGCGCGCGGCCTGTTCGATCA GGGTGACCTGTGAATAGCCT
Downstream 100 bases:
>100_bases GCTGCCTTCAGCCTTCCGGTTCAGTTTTCCGGGAGGGGCGTGAATTCCTGATCGTCGCCATCGGGCAGTTTCATCCGGCC CTGTTTCCAGTCTTCCTTGG
Product: histidine kinase A domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 611; Mature: 610
Protein sequence:
>611_residues MSLRYWVSVRPAGPAPTIAREVRFVGLIESYSLVNATVKVTRFGKNPSSSCPVSNGRMKMSIGLSDVVLFPIVGVGRFKR RETPDIPAYMHHRLVSLLTVMGFINLVNSAAVVFTLFGTTNTALLFGWMIPIWVFAISQIAWSRSRWDRSPTRPVRGRFL RKAEVATGVVGAWWGLCVMLAPVGDVGLKVSMFAIVFGMCAGVVAVVSPVANVAARFLLGAATTATIGFFLAPVGLPATI VMLGLVLTLASAFASLNAYRNLLMEMEAKRLAAQNHEQLLDAVTAIPEAFAIYDAAGNVIIQNAVHQRWFPKGMEKTDFR PGTEMQKVADVGGVMRSCVPTSSGGRVIIHTDVSKMEELRQEADESRRDAEEARLAVERFVGSVTRELRLPLRTLRTIAS RFETRSQIPFDDNEVRLSSDKMVSFADQALSLVDEVLSITQGGDSIVDGADVSLKSTLAQVITQKHSAITTLGVDIDEPS GQDAMIDSAKAARVLSRVFSAVLLELGQVCRGGGSLRVRCGVRGEQGWVSVEAAKLANGKMQSELTEDYLAESSENRLVW RALMQTIGGQIEMREARNGSIVYILKFNTNATSTKLGDAEALARPHSGRAA
Sequences:
>Translated_611_residues MSLRYWVSVRPAGPAPTIAREVRFVGLIESYSLVNATVKVTRFGKNPSSSCPVSNGRMKMSIGLSDVVLFPIVGVGRFKR RETPDIPAYMHHRLVSLLTVMGFINLVNSAAVVFTLFGTTNTALLFGWMIPIWVFAISQIAWSRSRWDRSPTRPVRGRFL RKAEVATGVVGAWWGLCVMLAPVGDVGLKVSMFAIVFGMCAGVVAVVSPVANVAARFLLGAATTATIGFFLAPVGLPATI VMLGLVLTLASAFASLNAYRNLLMEMEAKRLAAQNHEQLLDAVTAIPEAFAIYDAAGNVIIQNAVHQRWFPKGMEKTDFR PGTEMQKVADVGGVMRSCVPTSSGGRVIIHTDVSKMEELRQEADESRRDAEEARLAVERFVGSVTRELRLPLRTLRTIAS RFETRSQIPFDDNEVRLSSDKMVSFADQALSLVDEVLSITQGGDSIVDGADVSLKSTLAQVITQKHSAITTLGVDIDEPS GQDAMIDSAKAARVLSRVFSAVLLELGQVCRGGGSLRVRCGVRGEQGWVSVEAAKLANGKMQSELTEDYLAESSENRLVW RALMQTIGGQIEMREARNGSIVYILKFNTNATSTKLGDAEALARPHSGRAA >Mature_610_residues SLRYWVSVRPAGPAPTIAREVRFVGLIESYSLVNATVKVTRFGKNPSSSCPVSNGRMKMSIGLSDVVLFPIVGVGRFKRR ETPDIPAYMHHRLVSLLTVMGFINLVNSAAVVFTLFGTTNTALLFGWMIPIWVFAISQIAWSRSRWDRSPTRPVRGRFLR KAEVATGVVGAWWGLCVMLAPVGDVGLKVSMFAIVFGMCAGVVAVVSPVANVAARFLLGAATTATIGFFLAPVGLPATIV MLGLVLTLASAFASLNAYRNLLMEMEAKRLAAQNHEQLLDAVTAIPEAFAIYDAAGNVIIQNAVHQRWFPKGMEKTDFRP GTEMQKVADVGGVMRSCVPTSSGGRVIIHTDVSKMEELRQEADESRRDAEEARLAVERFVGSVTRELRLPLRTLRTIASR FETRSQIPFDDNEVRLSSDKMVSFADQALSLVDEVLSITQGGDSIVDGADVSLKSTLAQVITQKHSAITTLGVDIDEPSG QDAMIDSAKAARVLSRVFSAVLLELGQVCRGGGSLRVRCGVRGEQGWVSVEAAKLANGKMQSELTEDYLAESSENRLVWR ALMQTIGGQIEMREARNGSIVYILKFNTNATSTKLGDAEALARPHSGRAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66266; Mature: 66134
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRYWVSVRPAGPAPTIAREVRFVGLIESYSLVNATVKVTRFGKNPSSSCPVSNGRMKM CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCEEE SIGLSDVVLFPIVGVGRFKRRETPDIPAYMHHRLVSLLTVMGFINLVNSAAVVFTLFGTT EECCHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC NTALLFGWMIPIWVFAISQIAWSRSRWDRSPTRPVRGRFLRKAEVATGVVGAWWGLCVML CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH APVGDVGLKVSMFAIVFGMCAGVVAVVSPVANVAARFLLGAATTATIGFFLAPVGLPATI HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VMLGLVLTLASAFASLNAYRNLLMEMEAKRLAAQNHEQLLDAVTAIPEAFAIYDAAGNVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHH IQNAVHQRWFPKGMEKTDFRPGTEMQKVADVGGVMRSCVPTSSGGRVIIHTDVSKMEELR HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHH QEADESRRDAEEARLAVERFVGSVTRELRLPLRTLRTIASRFETRSQIPFDDNEVRLSSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCC KMVSFADQALSLVDEVLSITQGGDSIVDGADVSLKSTLAQVITQKHSAITTLGVDIDEPS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCC GQDAMIDSAKAARVLSRVFSAVLLELGQVCRGGGSLRVRCGVRGEQGWVSVEAAKLANGK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEHHHHHCCH MQSELTEDYLAESSENRLVWRALMQTIGGQIEMREARNGSIVYILKFNTNATSTKLGDAE HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCCCCCCCCHH ALARPHSGRAA HHCCCCCCCCC >Mature Secondary Structure SLRYWVSVRPAGPAPTIAREVRFVGLIESYSLVNATVKVTRFGKNPSSSCPVSNGRMKM CEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCEEE SIGLSDVVLFPIVGVGRFKRRETPDIPAYMHHRLVSLLTVMGFINLVNSAAVVFTLFGTT EECCHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC NTALLFGWMIPIWVFAISQIAWSRSRWDRSPTRPVRGRFLRKAEVATGVVGAWWGLCVML CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH APVGDVGLKVSMFAIVFGMCAGVVAVVSPVANVAARFLLGAATTATIGFFLAPVGLPATI HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VMLGLVLTLASAFASLNAYRNLLMEMEAKRLAAQNHEQLLDAVTAIPEAFAIYDAAGNVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHH IQNAVHQRWFPKGMEKTDFRPGTEMQKVADVGGVMRSCVPTSSGGRVIIHTDVSKMEELR HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHH QEADESRRDAEEARLAVERFVGSVTRELRLPLRTLRTIASRFETRSQIPFDDNEVRLSSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCC KMVSFADQALSLVDEVLSITQGGDSIVDGADVSLKSTLAQVITQKHSAITTLGVDIDEPS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCC GQDAMIDSAKAARVLSRVFSAVLLELGQVCRGGGSLRVRCGVRGEQGWVSVEAAKLANGK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEHHHHHCCH MQSELTEDYLAESSENRLVWRALMQTIGGQIEMREARNGSIVYILKFNTNATSTKLGDAE HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCCCCCCCCHH ALARPHSGRAA HHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA