Click here to switch to the map view.

The map label for this gene is 114799642

Identifier: 114799642

GI number: 114799642

Start: 977672

End: 978865

Strand: Direct

Name: 114799642

Synonym: HNE_0964

Alternate gene names: NA

Gene position: 977672-978865 (Clockwise)

Preceding gene: 114797581

Following gene: 114798384

Centisome position: 26.39

GC content: 69.18

Gene sequence:

>1194_bases
TTGAGCCACCCCCGAAGCCTCGGCCGCCTCCTGACCAACCTCACTCACTGGTTCGGTCCTGCCATGGCGCGTCCACGCAC
GCTGGAAGCCCTGCGCGCGGGGCTTGGCGCCGGGCTTGCGCTCGCCCTCTCCGGCCTCCTGCTGCTCGCCGTGCCGGATA
CCTCTGCCAGTCACGGCGTATCGGGCTTCCTGCTGATCGCCCCGCTTGGCGCGTCTGCATTCCTTCTGTTTGCCGTACCC
AATTCGCCGCTCGCCCAGCCCTGGTCGGCGCTGGCGGGCAACACGGTCTCCGCCCTCGTTGCGGTCAGCGCCGTGCTCAG
CGGGCTGCCGGAAATTCCCGCCATCGGCGTGGCCATCGGCGGCTCCGTCCTGGCGATGGCGCTGCTGCGGGCGATGCATC
CGCCCGGCGCGGCAGTTGCCCTGGCCACCGTACTCGGCGCGCCAATGGTGCATGATCTCGGCTACCGCTTCGTGCTGACG
CCGGTGCTGCTCGATACGGCCCTGCTTGTCGCTCTGGCCATTGCCTGGAACCGCCTCACGGGCCGGAAGTATCCCTTCCG
CCAGCCCAGCGATTCAAACCCCCACGGCACGCGGGACCGGCCCGCCAACCAGCGCCTCGGCCTGCCTGCCGAAGCGCTGG
CCGATATTCTCCAGCGCTATCGGCTCTCCGCCAATATCGGCACCGAAGATTTCGGCCGTCTCCTGGCAGAGGCCGAGGCG
GAAGCCGCCCGCCTGCGCTTTGACGGGCTCACCTGCGCCGACATCATGTCCCGCGATCTCGCCACCGTCCGGCCGGATAC
GGCCCTCAGCGAGGTGGCAGACCTGTTCCGCCGCCACCGCTTCAAAACCCTCCCGGTCACCGGCCCGGAAGGAGAGCTTC
TTGGCATCATCACCCAGAACGACCTGATCCAGCGCGCCCAGGGCGAGGCGCTCGCGCATCACGCCCCGTTCGGCGCCGCG
CTTGCCCAGCTTCTTGCGCGCCGCCGCGATACGCCGGCGCTGGCCCGCGATATTATGAGCCCGCCAGGCGAAACGGTCTT
GCCAGAGCAGGGCATCGGTATCCTTGTCCGCCTCCTCGCCGATGGCGGCAAACAGGCTGCTCCCGTCCTCGACAACGGCA
AGCTCACCGGCATCGTCACCCGCTCGGACCTCCTGGAAGCCCTCGCGCGAATTCCGCTCTGGTCTCCGGCCTGA

Upstream 100 bases:

>100_bases
TCAGCACTTACGAAGCTTCTGGGAAATTGTCACCCCGTGACTCTCCGGCGCCAAACCTCTACCCAGCCAACACCCGGCAA
CGACCCAGCGGAGCAGATAG

Downstream 100 bases:

>100_bases
TTGGTGGAAATGCAAAACGCCCGCGCTCAAGCCTTTAGGAGGGCTGAGCGCGGGCGCTGGATCGCTGCCACCGGCGGGGG
GTGCGCCGGTCAGGGGGAGA

Product: HPP family/CBS domain-containing protein

Products: NA

Alternate protein names: CBS Domain Containing Membrane Protein; HPP Family Protein; Cbs Domain Containing Membrane Protein; HPP Family/CBS Domain-Containing Protein; HPP Domain And CBS Domain Pair-Containing Protein; Transmembrane Protein; Tryptophan Synthase Alpha Chain; CBS Domain-Containing Membrane Protein; CbsHpp; CBS Domain Pair Family; HPP Family Protein+B; CBS-Domain-Containing Membrane Protein; HPP Domain-Containing Protein; Signal Transduction Protein; Conserved Protein

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MSHPRSLGRLLTNLTHWFGPAMARPRTLEALRAGLGAGLALALSGLLLLAVPDTSASHGVSGFLLIAPLGASAFLLFAVP
NSPLAQPWSALAGNTVSALVAVSAVLSGLPEIPAIGVAIGGSVLAMALLRAMHPPGAAVALATVLGAPMVHDLGYRFVLT
PVLLDTALLVALAIAWNRLTGRKYPFRQPSDSNPHGTRDRPANQRLGLPAEALADILQRYRLSANIGTEDFGRLLAEAEA
EAARLRFDGLTCADIMSRDLATVRPDTALSEVADLFRRHRFKTLPVTGPEGELLGIITQNDLIQRAQGEALAHHAPFGAA
LAQLLARRRDTPALARDIMSPPGETVLPEQGIGILVRLLADGGKQAAPVLDNGKLTGIVTRSDLLEALARIPLWSPA

Sequences:

>Translated_397_residues
MSHPRSLGRLLTNLTHWFGPAMARPRTLEALRAGLGAGLALALSGLLLLAVPDTSASHGVSGFLLIAPLGASAFLLFAVP
NSPLAQPWSALAGNTVSALVAVSAVLSGLPEIPAIGVAIGGSVLAMALLRAMHPPGAAVALATVLGAPMVHDLGYRFVLT
PVLLDTALLVALAIAWNRLTGRKYPFRQPSDSNPHGTRDRPANQRLGLPAEALADILQRYRLSANIGTEDFGRLLAEAEA
EAARLRFDGLTCADIMSRDLATVRPDTALSEVADLFRRHRFKTLPVTGPEGELLGIITQNDLIQRAQGEALAHHAPFGAA
LAQLLARRRDTPALARDIMSPPGETVLPEQGIGILVRLLADGGKQAAPVLDNGKLTGIVTRSDLLEALARIPLWSPA
>Mature_396_residues
SHPRSLGRLLTNLTHWFGPAMARPRTLEALRAGLGAGLALALSGLLLLAVPDTSASHGVSGFLLIAPLGASAFLLFAVPN
SPLAQPWSALAGNTVSALVAVSAVLSGLPEIPAIGVAIGGSVLAMALLRAMHPPGAAVALATVLGAPMVHDLGYRFVLTP
VLLDTALLVALAIAWNRLTGRKYPFRQPSDSNPHGTRDRPANQRLGLPAEALADILQRYRLSANIGTEDFGRLLAEAEAE
AARLRFDGLTCADIMSRDLATVRPDTALSEVADLFRRHRFKTLPVTGPEGELLGIITQNDLIQRAQGEALAHHAPFGAAL
AQLLARRRDTPALARDIMSPPGETVLPEQGIGILVRLLADGGKQAAPVLDNGKLTGIVTRSDLLEALARIPLWSPA

Specific function: Unknown

COG id: COG3448

COG function: function code T; CBS-domain-containing membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41696; Mature: 41565

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHPRSLGRLLTNLTHWFGPAMARPRTLEALRAGLGAGLALALSGLLLLAVPDTSASHGV
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHCCEEEEEECCCCCCCCC
SGFLLIAPLGASAFLLFAVPNSPLAQPWSALAGNTVSALVAVSAVLSGLPEIPAIGVAIG
CEEEEEEECCCCEEEEEECCCCCCCCHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHH
GSVLAMALLRAMHPPGAAVALATVLGAPMVHDLGYRFVLTPVLLDTALLVALAIAWNRLT
HHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GRKYPFRQPSDSNPHGTRDRPANQRLGLPAEALADILQRYRLSANIGTEDFGRLLAEAEA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
EAARLRFDGLTCADIMSRDLATVRPDTALSEVADLFRRHRFKTLPVTGPEGELLGIITQN
HHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHH
DLIQRAQGEALAHHAPFGAALAQLLARRRDTPALARDIMSPPGETVLPEQGIGILVRLLA
HHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
DGGKQAAPVLDNGKLTGIVTRSDLLEALARIPLWSPA
CCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SHPRSLGRLLTNLTHWFGPAMARPRTLEALRAGLGAGLALALSGLLLLAVPDTSASHGV
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHCCEEEEEECCCCCCCCC
SGFLLIAPLGASAFLLFAVPNSPLAQPWSALAGNTVSALVAVSAVLSGLPEIPAIGVAIG
CEEEEEEECCCCEEEEEECCCCCCCCHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHH
GSVLAMALLRAMHPPGAAVALATVLGAPMVHDLGYRFVLTPVLLDTALLVALAIAWNRLT
HHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GRKYPFRQPSDSNPHGTRDRPANQRLGLPAEALADILQRYRLSANIGTEDFGRLLAEAEA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
EAARLRFDGLTCADIMSRDLATVRPDTALSEVADLFRRHRFKTLPVTGPEGELLGIITQN
HHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHH
DLIQRAQGEALAHHAPFGAALAQLLARRRDTPALARDIMSPPGETVLPEQGIGILVRLLA
HHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
DGGKQAAPVLDNGKLTGIVTRSDLLEALARIPLWSPA
CCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA