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The map label for this gene is dgoK [H]

Identifier: 114798359

GI number: 114798359

Start: 2077976

End: 2078848

Strand: Reverse

Name: dgoK [H]

Synonym: HNE_2003

Alternate gene names: 114798359

Gene position: 2078848-2077976 (Counterclockwise)

Preceding gene: 114799526

Following gene: 114798431

Centisome position: 56.11

GC content: 62.2

Gene sequence:

>873_bases
ATGAAAGACAGCCTCGCGCTGATTGGCCTGGATTGGTCCGGCTCCCGGCTTTCTGCCTGGGCGTATGATGGCGAGGGAGA
GATTCTTTCTTCCGCCACCCTGCATGAACCTGAGCGTGTGCCCCCTGCCGAATATGTTTCGCGGCTGCGGTTTCATGTCA
CCGAGTGGCTCGGCGCGTGGCCGGAGGTGCCGGTCATTGTGTCCGGGGATGTCGGTATTCTGTCCCAAAATGTCCCGAAT
TTGTCATTGCCTGTCCTGCTTTCGGCGCTGCCGGGTCATCTCATGTCACGCGATGGCATTTGGATTGTACCGTGGATACG
CCAGCTCTCGCCGCCCGACCTTTCAGGCGGATCAGAGACAATTCTCGCAGGATTGGGCGAAGATCACGCCGCCGTCTGCA
TCGCCGGCCGCCACACCCGCCACTACGATCTGGAGCACGGCAGAATCGTCAGCCTCTCCACGGAAATCACCTCGGAACTC
CGCGATCTTCTGCTGACGGCAGGCTCCTTGTCGCTGAAGGATGGCCCGGCCCAGACGTTCGATCCGCGCGTCTTCCGCGA
ATGGGTCGAGCGGGCGCTGGATACCGACGATACCCCGCCCGTCTACTCGGTCGAAGCCGCCGTGTTCACCGGCCTGCTGG
ACCCCGCCAACAAGGCTGCCGCCATTGCAGGCCTCCTGATCGGTACGGATGTCGCCGCCCATTACGATCCGGGTGATGAG
GTGCTGCTGGTCGCCGATGGCCCCCTGCGGGAAGCCTACGGTCTCGCATTCGACGCGCTCGGCGCCGATGTTGATGAAAT
CTCCGCCATTGAAGCGCTGCAGGACGGGTTGTTTGAACTCGCTGACCTTGCAGGCCTGCTCGGCGAGGATTAA

Upstream 100 bases:

>100_bases
AGCAAGAGCAATAGGTCATCTTGCAGCTTGCGCCCGATCAAACGCTGGCCCACACCGGAGCCTTGAGATCAGATGCGTCG
GTCATCGGGAAGCAATTGAG

Downstream 100 bases:

>100_bases
TCCGCCAATCCTGTCCACAACTCTGGTATTGCCGCCATGATCCTCTCCCCCGAATGCGTTGCCCCGACTGGCTGTATGCA
GGGTGAGGCGCCCCTTTGGA

Product: putative 2-dehydro-3-deoxygalactonokinase

Products: NA

Alternate protein names: 2-keto-3-deoxy-galactonokinase; 2-oxo-3-deoxygalactonate kinase [H]

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MKDSLALIGLDWSGSRLSAWAYDGEGEILSSATLHEPERVPPAEYVSRLRFHVTEWLGAWPEVPVIVSGDVGILSQNVPN
LSLPVLLSALPGHLMSRDGIWIVPWIRQLSPPDLSGGSETILAGLGEDHAAVCIAGRHTRHYDLEHGRIVSLSTEITSEL
RDLLLTAGSLSLKDGPAQTFDPRVFREWVERALDTDDTPPVYSVEAAVFTGLLDPANKAAAIAGLLIGTDVAAHYDPGDE
VLLVADGPLREAYGLAFDALGADVDEISAIEALQDGLFELADLAGLLGED

Sequences:

>Translated_290_residues
MKDSLALIGLDWSGSRLSAWAYDGEGEILSSATLHEPERVPPAEYVSRLRFHVTEWLGAWPEVPVIVSGDVGILSQNVPN
LSLPVLLSALPGHLMSRDGIWIVPWIRQLSPPDLSGGSETILAGLGEDHAAVCIAGRHTRHYDLEHGRIVSLSTEITSEL
RDLLLTAGSLSLKDGPAQTFDPRVFREWVERALDTDDTPPVYSVEAAVFTGLLDPANKAAAIAGLLIGTDVAAHYDPGDE
VLLVADGPLREAYGLAFDALGADVDEISAIEALQDGLFELADLAGLLGED
>Mature_290_residues
MKDSLALIGLDWSGSRLSAWAYDGEGEILSSATLHEPERVPPAEYVSRLRFHVTEWLGAWPEVPVIVSGDVGILSQNVPN
LSLPVLLSALPGHLMSRDGIWIVPWIRQLSPPDLSGGSETILAGLGEDHAAVCIAGRHTRHYDLEHGRIVSLSTEITSEL
RDLLLTAGSLSLKDGPAQTFDPRVFREWVERALDTDDTPPVYSVEAAVFTGLLDPANKAAAIAGLLIGTDVAAHYDPGDE
VLLVADGPLREAYGLAFDALGADVDEISAIEALQDGLFELADLAGLLGED

Specific function: D-galactonate degradation; second step. [C]

COG id: COG3734

COG function: function code G; 2-keto-3-deoxy-galactonokinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790128, Length=285, Percent_Identity=28.0701754385965, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007729 [H]

Pfam domain/function: PF05035 DGOK [H]

EC number: =2.7.1.58 [H]

Molecular weight: Translated: 30998; Mature: 30998

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDSLALIGLDWSGSRLSAWAYDGEGEILSSATLHEPERVPPAEYVSRLRFHVTEWLGAW
CCCCEEEEEECCCCCEEEEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PEVPVIVSGDVGILSQNVPNLSLPVLLSALPGHLMSRDGIWIVPWIRQLSPPDLSGGSET
CCCCEEEECCCCEECCCCCCCHHHHHHHHHCHHHHCCCCEEEEEHHHHCCCCCCCCCCCE
ILAGLGEDHAAVCIAGRHTRHYDLEHGRIVSLSTEITSELRDLLLTAGSLSLKDGPAQTF
EEEECCCCCEEEEEECCCCCEEECCCCEEEEEHHHHHHHHHHHHHHCCCCEECCCCCCCC
DPRVFREWVERALDTDDTPPVYSVEAAVFTGLLDPANKAAAIAGLLIGTDVAAHYDPGDE
CHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCC
VLLVADGPLREAYGLAFDALGADVDEISAIEALQDGLFELADLAGLLGED
EEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKDSLALIGLDWSGSRLSAWAYDGEGEILSSATLHEPERVPPAEYVSRLRFHVTEWLGAW
CCCCEEEEEECCCCCEEEEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PEVPVIVSGDVGILSQNVPNLSLPVLLSALPGHLMSRDGIWIVPWIRQLSPPDLSGGSET
CCCCEEEECCCCEECCCCCCCHHHHHHHHHCHHHHCCCCEEEEEHHHHCCCCCCCCCCCE
ILAGLGEDHAAVCIAGRHTRHYDLEHGRIVSLSTEITSELRDLLLTAGSLSLKDGPAQTF
EEEECCCCCEEEEEECCCCCEEECCCCEEEEEHHHHHHHHHHHHHHCCCCEECCCCCCCC
DPRVFREWVERALDTDDTPPVYSVEAAVFTGLLDPANKAAAIAGLLIGTDVAAHYDPGDE
CHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCC
VLLVADGPLREAYGLAFDALGADVDEISAIEALQDGLFELADLAGLLGED
EEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]