| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is eamA [H]
Identifier: 114798186
GI number: 114798186
Start: 473796
End: 474698
Strand: Reverse
Name: eamA [H]
Synonym: HNE_0481
Alternate gene names: 114798186
Gene position: 474698-473796 (Counterclockwise)
Preceding gene: 114798941
Following gene: 114800083
Centisome position: 12.81
GC content: 63.34
Gene sequence:
>903_bases ATGGCCATACGTGACTTCATCCTGCTCTGCGCTGTCTGCCTCGTCTGGGGGCTGAACCTTGTCGTCACGCGCTGGGCCGT GGCCGACATGGCCATTCCGCCGATCTTCTTTGCCGCGCTGCGTTTCCTCGGCGTGGCGGTCTGCCTCGTGCCCTTCCTCT TCCCGCGCCCACCCAATTTGCGCACGCTGTTCTTCGTCTCGATCATGATCGGCAGCGTCCACTTCTCGCTCCTCTTCATC GGTCTCCAACACGCAGACGCTTCCGCTGCCGCTGTCACCGGCCAGCTCGGCGTGCCCTTCTCCACGCTGATGAGCATGCT GTTCCTCGGAGAAGTCATCCGCTGGCGCCGCGCTATCGGCATCACGCTCGCCTTTCTGGGTGTCATCATCATCGCGCTGG ACCCGGCAAACTTCTCGGTCTCCTTCGGCCTGCTCTACATCATCGCCTCCGCCTTCATCGGCTCGGCGGGCGGCATCGTG ATGAAACGCATGCCGCAGATCTCCGGCCTGCGCATGCAGGCCTGGGTCGGCCTTTTCAGCTTTGCGCCGCTCTTTGCGCT CTCCTTCGCCATCGAGGAAAACCAGCTTGCCACCTACATCGATGGCGGCTGGATGGTCTGGGCCGCCAGTGCCTTCGCCA TCCTCGGTGTCTCCGTGTTCGGCCATTCGGCCTTCTATACGCTGCTCAAGAAGTATGACGTCTCCCTCCTCTCCCCGCTC ACGCTGATGACCCCCATCTGGGGCGTCATCTTCGGCATTGCGCTGCTGAACGAACCGCTGACCCCGCGCCTCATCCTCGG CGCCATCGTTTCGCTGTCGGGCGTGCTTGTCATCGCGCTCCGCCCGAACGAGAAAATGCCTGAAGCGGCCCTCGGCAAGA AGGCCGGCGCCGGAGACTCGTGA
Upstream 100 bases:
>100_bases GGGAAGCCAAGCAGTGCCACCCCCGCATAGCTCCCCTGCCGCCCTGACGCGGCGCGCCCCCTGCCCATTGTCACAAAACC CTGATAGGCCCGAACCCATC
Downstream 100 bases:
>100_bases TGGAAATCGAAGACACCCCCAGCCCGAACTTTGACGACCGCAAACACCCCGTCACCCTGCTCGTGCTCCATTATACGGGC ATGGAAAGCGGCGAGGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MAIRDFILLCAVCLVWGLNLVVTRWAVADMAIPPIFFAALRFLGVAVCLVPFLFPRPPNLRTLFFVSIMIGSVHFSLLFI GLQHADASAAAVTGQLGVPFSTLMSMLFLGEVIRWRRAIGITLAFLGVIIIALDPANFSVSFGLLYIIASAFIGSAGGIV MKRMPQISGLRMQAWVGLFSFAPLFALSFAIEENQLATYIDGGWMVWAASAFAILGVSVFGHSAFYTLLKKYDVSLLSPL TLMTPIWGVIFGIALLNEPLTPRLILGAIVSLSGVLVIALRPNEKMPEAALGKKAGAGDS
Sequences:
>Translated_300_residues MAIRDFILLCAVCLVWGLNLVVTRWAVADMAIPPIFFAALRFLGVAVCLVPFLFPRPPNLRTLFFVSIMIGSVHFSLLFI GLQHADASAAAVTGQLGVPFSTLMSMLFLGEVIRWRRAIGITLAFLGVIIIALDPANFSVSFGLLYIIASAFIGSAGGIV MKRMPQISGLRMQAWVGLFSFAPLFALSFAIEENQLATYIDGGWMVWAASAFAILGVSVFGHSAFYTLLKKYDVSLLSPL TLMTPIWGVIFGIALLNEPLTPRLILGAIVSLSGVLVIALRPNEKMPEAALGKKAGAGDS >Mature_299_residues AIRDFILLCAVCLVWGLNLVVTRWAVADMAIPPIFFAALRFLGVAVCLVPFLFPRPPNLRTLFFVSIMIGSVHFSLLFIG LQHADASAAAVTGQLGVPFSTLMSMLFLGEVIRWRRAIGITLAFLGVIIIALDPANFSVSFGLLYIIASAFIGSAGGIVM KRMPQISGLRMQAWVGLFSFAPLFALSFAIEENQLATYIDGGWMVWAASAFAILGVSVFGHSAFYTLLKKYDVSLLSPLT LMTPIWGVIFGIALLNEPLTPRLILGAIVSLSGVLVIALRPNEKMPEAALGKKAGAGDS
Specific function: May be an export pump for cysteine and other metabolites of the cysteine pathway (such as N-acetyl-L-serine (NAS) and O- acetyl-L-serine (OAS)), and for other amino acids and their metabolites [H]
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
Organism=Escherichia coli, GI87081929, Length=289, Percent_Identity=26.9896193771626, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32239; Mature: 32108
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIRDFILLCAVCLVWGLNLVVTRWAVADMAIPPIFFAALRFLGVAVCLVPFLFPRPPNL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH RTLFFVSIMIGSVHFSLLFIGLQHADASAAAVTGQLGVPFSTLMSMLFLGEVIRWRRAIG HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHH ITLAFLGVIIIALDPANFSVSFGLLYIIASAFIGSAGGIVMKRMPQISGLRMQAWVGLFS HHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHH FAPLFALSFAIEENQLATYIDGGWMVWAASAFAILGVSVFGHSAFYTLLKKYDVSLLSPL HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH TLMTPIWGVIFGIALLNEPLTPRLILGAIVSLSGVLVIALRPNEKMPEAALGKKAGAGDS HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHCCCCCCCCC >Mature Secondary Structure AIRDFILLCAVCLVWGLNLVVTRWAVADMAIPPIFFAALRFLGVAVCLVPFLFPRPPNL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH RTLFFVSIMIGSVHFSLLFIGLQHADASAAAVTGQLGVPFSTLMSMLFLGEVIRWRRAIG HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHH ITLAFLGVIIIALDPANFSVSFGLLYIIASAFIGSAGGIVMKRMPQISGLRMQAWVGLFS HHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHH FAPLFALSFAIEENQLATYIDGGWMVWAASAFAILGVSVFGHSAFYTLLKKYDVSLLSPL HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH TLMTPIWGVIFGIALLNEPLTPRLILGAIVSLSGVLVIALRPNEKMPEAALGKKAGAGDS HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8383113; 9097039; 9278503; 10844694 [H]