| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is yfhR [C]
Identifier: 114798177
GI number: 114798177
Start: 764335
End: 765243
Strand: Reverse
Name: yfhR [C]
Synonym: HNE_0757
Alternate gene names: 114798177
Gene position: 765243-764335 (Counterclockwise)
Preceding gene: 114798967
Following gene: 114797404
Centisome position: 20.65
GC content: 65.13
Gene sequence:
>909_bases ATGAAAACTTTTGCCGCGATCAGCCTTGCTGCCACCGCCCTGCTTGCCGCCTGCACGACGCCTGTCGCGCTGGCGCCGGA AGCCACGCTCACCGGACGTTACGCCGATCCAGCCGCGATTGATCCGGACCATCCGCCCGCGCTGATGGAGCTCAACTTCG AGAGCGGCGGCGCGCGCCTCAACGGCCTGATCTATCTGGCGGACGGTGCGGGGCCCCACCCGACGGTGGTTCTGCTGCAT GGCTATCCGGGCAATGAAAAGAACCTCGACCTGGCGCAGGCGATGCGCCGCGAGGGCTTCAATGTGATGTTCTTCCACTA TCGCGGCGCCTGGGGCAGCGACGGCAATTTCAGCTTCAGCAATGTGGTCGAGGACGTCGGCGCAGCGACAGGCTTCCTGC GCGCCAATGCCGGCACCTACCGGACTGATCCGGAGAAGCTGATTTTGATCGGCCATTCGATGGGCGGCTTTGCGGCCTTT TCGGCCGCGGCCAATGACAGCCGCGTTGCCTGCGCCGCCGGGCTGGCGCCTGCCGATTTCGGCGTTCTGGGCGCCGCCAT GGCAGCCAACCCGGAGGTTCTGGAGGGCTTTTCGGGCTATACCGACACGCTGAGCATGCTGAAGGGCTTCTCTGGCGAAG CGGCCATTGTGGAACTGTTTTCGAATGCCGCGGCCTTTGACCTGCGCGCCAAGGCGCCCGAGCTTGCGGGCAAGTCGGTT CTGATTGTGGCGGGCGACGCGGATGAAAGCACGCCGCTGGAAGGCATGATCCAGCCGTTGATGGATGCGTATGAGGCGGC GCCGGACATCGAGACGACCCTTGTGGTGCTGCCGGGGGATCACTCCTTCTCCTGGTCGCGGGCAGCGCTAATCGACACGG TGATCGGCTGGGCAGACGGCTGCCGCTGA
Upstream 100 bases:
>100_bases AAAAAGAGAAGACCCCGCCGGTTTGCGCCGGCGGGGTTTTTCTTTGCCGCTGGCGGGCGCGCCCCGCCGCTGATACCCTC CGTGCAAGGGAGACACTGCC
Downstream 100 bases:
>100_bases AACGCCTGAAGCGCGAGACATCTTTCCTCCGCGCGTTCTGGCGGCTAACGGTGCCCGGATGATGGATACTGTTGTTTTTG ATACGTTGCTGATGGCCTTC
Product: putative lipoprotein
Products: NA
Alternate protein names: Histidine Triad Protein; Alpha/Beta Hydrolase
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MKTFAAISLAATALLAACTTPVALAPEATLTGRYADPAAIDPDHPPALMELNFESGGARLNGLIYLADGAGPHPTVVLLH GYPGNEKNLDLAQAMRREGFNVMFFHYRGAWGSDGNFSFSNVVEDVGAATGFLRANAGTYRTDPEKLILIGHSMGGFAAF SAAANDSRVACAAGLAPADFGVLGAAMAANPEVLEGFSGYTDTLSMLKGFSGEAAIVELFSNAAAFDLRAKAPELAGKSV LIVAGDADESTPLEGMIQPLMDAYEAAPDIETTLVVLPGDHSFSWSRAALIDTVIGWADGCR
Sequences:
>Translated_302_residues MKTFAAISLAATALLAACTTPVALAPEATLTGRYADPAAIDPDHPPALMELNFESGGARLNGLIYLADGAGPHPTVVLLH GYPGNEKNLDLAQAMRREGFNVMFFHYRGAWGSDGNFSFSNVVEDVGAATGFLRANAGTYRTDPEKLILIGHSMGGFAAF SAAANDSRVACAAGLAPADFGVLGAAMAANPEVLEGFSGYTDTLSMLKGFSGEAAIVELFSNAAAFDLRAKAPELAGKSV LIVAGDADESTPLEGMIQPLMDAYEAAPDIETTLVVLPGDHSFSWSRAALIDTVIGWADGCR >Mature_302_residues MKTFAAISLAATALLAACTTPVALAPEATLTGRYADPAAIDPDHPPALMELNFESGGARLNGLIYLADGAGPHPTVVLLH GYPGNEKNLDLAQAMRREGFNVMFFHYRGAWGSDGNFSFSNVVEDVGAATGFLRANAGTYRTDPEKLILIGHSMGGFAAF SAAANDSRVACAAGLAPADFGVLGAAMAANPEVLEGFSGYTDTLSMLKGFSGEAAIVELFSNAAAFDLRAKAPELAGKSV LIVAGDADESTPLEGMIQPLMDAYEAAPDIETTLVVLPGDHSFSWSRAALIDTVIGWADGCR
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31333; Mature: 31333
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTFAAISLAATALLAACTTPVALAPEATLTGRYADPAAIDPDHPPALMELNFESGGARL CCCHHHHHHHHHHHHHHHCCCCEECCCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCEE NGLIYLADGAGPHPTVVLLHGYPGNEKNLDLAQAMRREGFNVMFFHYRGAWGSDGNFSFS EEEEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCHH NVVEDVGAATGFLRANAGTYRTDPEKLILIGHSMGGFAAFSAAANDSRVACAAGLAPADF HHHHHHHHHHCEEEECCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCEEEECCCCCCHH GVLGAAMAANPEVLEGFSGYTDTLSMLKGFSGEAAIVELFSNAAAFDLRAKAPELAGKSV HHHHHHHHCCHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCCCCCCCCEE LIVAGDADESTPLEGMIQPLMDAYEAAPDIETTLVVLPGDHSFSWSRAALIDTVIGWADG EEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCC CR CC >Mature Secondary Structure MKTFAAISLAATALLAACTTPVALAPEATLTGRYADPAAIDPDHPPALMELNFESGGARL CCCHHHHHHHHHHHHHHHCCCCEECCCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCEE NGLIYLADGAGPHPTVVLLHGYPGNEKNLDLAQAMRREGFNVMFFHYRGAWGSDGNFSFS EEEEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCHH NVVEDVGAATGFLRANAGTYRTDPEKLILIGHSMGGFAAFSAAANDSRVACAAGLAPADF HHHHHHHHHHCEEEECCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCEEEECCCCCCHH GVLGAAMAANPEVLEGFSGYTDTLSMLKGFSGEAAIVELFSNAAAFDLRAKAPELAGKSV HHHHHHHHCCHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCCCCCCCCEE LIVAGDADESTPLEGMIQPLMDAYEAAPDIETTLVVLPGDHSFSWSRAALIDTVIGWADG EEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCC CR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA