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The map label for this gene is rsmC [H]

Identifier: 114797404

GI number: 114797404

Start: 763233

End: 764273

Strand: Reverse

Name: rsmC [H]

Synonym: HNE_0756

Alternate gene names: 114797404

Gene position: 764273-763233 (Counterclockwise)

Preceding gene: 114798177

Following gene: 114800237

Centisome position: 20.63

GC content: 62.25

Gene sequence:

>1041_bases
ATGGATACTGTTGTTTTTGATACGTTGCTGATGGCCTTCGACACGGGGGCGGTTTCCCTGCCTGAGGAAGGCCCGATCCT
GGTGCTGAATGCCGAGCCCGGCGGCTGGCTGTCGCAGCTTCCCAAGGAGCGCGTCGTTTGCCGCACGAGCATGAAACCGG
CCCATGATGCGCTGAAAGCCGCGGGCTATAATGTGCTGGCGCCGGACTCGGTGGAGATTCCGCAGGCGCAGCTGACGATT
GTGGTGCCCCCGCGCCAGCGCGATTTTGCACGCGCGCTGTATGCCCGCGCCCTGCTGGCGGCGCCGGAGGGCGGAGTGAT
CCTGGCGAGCCTGCCCAATACACTTGGCGGCAAGAACGCCGAAAAGGTGTTCGCAGAAATCGCGGGCGATGCGGGCAGCC
TGACCAAAAACAAATGCCGCGCGTTCTGGGCGGTGAAGCGCGCAGATGAAATGAACACGGAGCTGGTGGAAGACTGGATT
GCGCAGGACACGCCGCGCGAGATCGAGCCGAGCCTCTGGAGCCGGCCGGGCCTTTTCAGCTGGGACCGGATTGATCCGGG
CAGCGAGCTGCTGGCCGACAGCATACCTGAATACACCAAGGGCATCGGCATCGACATTGGCGCGGGCAATGGCTTTCTCA
GCCGCGAAGTTCTCAACCATTGCGACAAGGTGGAGCGTATGGATCTTGTCGAGGCGGACTATCGCGCGCTGATCTGCCAG
GAGCAGACGATGGCGCCGTTTGGCGCGCGGTGTACGATCAAATGGGCAGACGCGCTCAAAGACCTGCCACGGGCGACCTA
TGATTTTGCGCTGATGAACCCGCCTTTCCATACAGGCCGCGCGGATAATTCCGAACTGGGCCGGGCGTTTATCCGGGCGG
CGGCGGCCACGCTGAAACCCTCGGGCACACTATGGCTGGTGGCCAACCGGCATCTTCCGTATGAGGGCGAACTCTCTGCC
TGCTTCCGCGGCGTTGAGATGCTTGATGACGAAGACGGCTACAAGATCATCAAGGCCGAGAAGCCCAAGCGCCAGAAATG
A

Upstream 100 bases:

>100_bases
ATCGACACGGTGATCGGCTGGGCAGACGGCTGCCGCTGAAACGCCTGAAGCGCGAGACATCTTTCCTCCGCGCGTTCTGG
CGGCTAACGGTGCCCGGATG

Downstream 100 bases:

>100_bases
GCGGGCAATGACCGAAACCCGCAAGCTCGCAAAATACCTCGCCAGTCTTGGCTATGGTTCGCGCAAGGAGATGGAAGTGG
CCATCCGGCGCGGCCGCGTG

Product: putative methyltransferase

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC [H]

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MDTVVFDTLLMAFDTGAVSLPEEGPILVLNAEPGGWLSQLPKERVVCRTSMKPAHDALKAAGYNVLAPDSVEIPQAQLTI
VVPPRQRDFARALYARALLAAPEGGVILASLPNTLGGKNAEKVFAEIAGDAGSLTKNKCRAFWAVKRADEMNTELVEDWI
AQDTPREIEPSLWSRPGLFSWDRIDPGSELLADSIPEYTKGIGIDIGAGNGFLSREVLNHCDKVERMDLVEADYRALICQ
EQTMAPFGARCTIKWADALKDLPRATYDFALMNPPFHTGRADNSELGRAFIRAAAATLKPSGTLWLVANRHLPYEGELSA
CFRGVEMLDDEDGYKIIKAEKPKRQK

Sequences:

>Translated_346_residues
MDTVVFDTLLMAFDTGAVSLPEEGPILVLNAEPGGWLSQLPKERVVCRTSMKPAHDALKAAGYNVLAPDSVEIPQAQLTI
VVPPRQRDFARALYARALLAAPEGGVILASLPNTLGGKNAEKVFAEIAGDAGSLTKNKCRAFWAVKRADEMNTELVEDWI
AQDTPREIEPSLWSRPGLFSWDRIDPGSELLADSIPEYTKGIGIDIGAGNGFLSREVLNHCDKVERMDLVEADYRALICQ
EQTMAPFGARCTIKWADALKDLPRATYDFALMNPPFHTGRADNSELGRAFIRAAAATLKPSGTLWLVANRHLPYEGELSA
CFRGVEMLDDEDGYKIIKAEKPKRQK
>Mature_346_residues
MDTVVFDTLLMAFDTGAVSLPEEGPILVLNAEPGGWLSQLPKERVVCRTSMKPAHDALKAAGYNVLAPDSVEIPQAQLTI
VVPPRQRDFARALYARALLAAPEGGVILASLPNTLGGKNAEKVFAEIAGDAGSLTKNKCRAFWAVKRADEMNTELVEDWI
AQDTPREIEPSLWSRPGLFSWDRIDPGSELLADSIPEYTKGIGIDIGAGNGFLSREVLNHCDKVERMDLVEADYRALICQ
EQTMAPFGARCTIKWADALKDLPRATYDFALMNPPFHTGRADNSELGRAFIRAAAATLKPSGTLWLVANRHLPYEGELSA
CFRGVEMLDDEDGYKIIKAEKPKRQK

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family [H]

Homologues:

Organism=Escherichia coli, GI1790830, Length=171, Percent_Identity=30.4093567251462, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI87082206, Length=215, Percent_Identity=26.5116279069767, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS; PF08468 MTS_N [H]

EC number: =2.1.1.172 [H]

Molecular weight: Translated: 37982; Mature: 37982

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTVVFDTLLMAFDTGAVSLPEEGPILVLNAEPGGWLSQLPKERVVCRTSMKPAHDALKA
CCHHHHHHHHHHHCCCCEECCCCCCEEEEECCCCCHHHHCCHHHHHHHCCCCHHHHHHHH
AGYNVLAPDSVEIPQAQLTIVVPPRQRDFARALYARALLAAPEGGVILASLPNTLGGKNA
CCCCEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCH
EKVFAEIAGDAGSLTKNKCRAFWAVKRADEMNTELVEDWIAQDTPREIEPSLWSRPGLFS
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHCCCCCCCC
WDRIDPGSELLADSIPEYTKGIGIDIGAGNGFLSREVLNHCDKVERMDLVEADYRALICQ
CCCCCCHHHHHHHCCHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
EQTMAPFGARCTIKWADALKDLPRATYDFALMNPPFHTGRADNSELGRAFIRAAAATLKP
HHCCCCCCCEEEEEHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCC
SGTLWLVANRHLPYEGELSACFRGVEMLDDEDGYKIIKAEKPKRQK
CCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCC
>Mature Secondary Structure
MDTVVFDTLLMAFDTGAVSLPEEGPILVLNAEPGGWLSQLPKERVVCRTSMKPAHDALKA
CCHHHHHHHHHHHCCCCEECCCCCCEEEEECCCCCHHHHCCHHHHHHHCCCCHHHHHHHH
AGYNVLAPDSVEIPQAQLTIVVPPRQRDFARALYARALLAAPEGGVILASLPNTLGGKNA
CCCCEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCH
EKVFAEIAGDAGSLTKNKCRAFWAVKRADEMNTELVEDWIAQDTPREIEPSLWSRPGLFS
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHCCCCCCCC
WDRIDPGSELLADSIPEYTKGIGIDIGAGNGFLSREVLNHCDKVERMDLVEADYRALICQ
CCCCCCHHHHHHHCCHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
EQTMAPFGARCTIKWADALKDLPRATYDFALMNPPFHTGRADNSELGRAFIRAAAATLKP
HHCCCCCCCEEEEEHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCC
SGTLWLVANRHLPYEGELSACFRGVEMLDDEDGYKIIKAEKPKRQK
CCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA