Click here to switch to the map view.

The map label for this gene is 114798144

Identifier: 114798144

GI number: 114798144

Start: 1975012

End: 1975752

Strand: Reverse

Name: 114798144

Synonym: HNE_1908

Alternate gene names: NA

Gene position: 1975752-1975012 (Counterclockwise)

Preceding gene: 114799676

Following gene: 114799335

Centisome position: 53.33

GC content: 65.32

Gene sequence:

>741_bases
ATGGGCGTGGCTGTGGACGCGCCTCTGGTGGAGGCTTTGCTGGCCGCAGCGCCCGCCCTTCCGGATGCACCGGAACAGGC
GCAGGCGCTGGAGCCTGCCCCCCTGCGCAAGCGCGGCGCCCGCACGGTAGCCGATTGGGTCCGGGAGGCAGAAACAATTG
CAGCGGGCTGCGCAAACCTTGATGAACTCACGGCAGCAGCCGGCCAGTTCAGTGGCAGCCCTCTCAGGGCAAGCTGCGAG
AATACGGTTGTTTACGACGGAACGCCCGGCGCCAGCCTACTGGTGATCGGGGAGGGGCCGGGCGCGCAGGAAGACCGGCA
GGGCAAGCCTTTTGTCGGCAAGGCAGGTCAGCTGCTCGACAAGATGCTCGCCGCCATTGGCCGCAACCGCGCGGAAAATG
CCCTGATTACCAACGTCAATTACTGGCGCCCGCCGGGCAACCGGAGCCCCGAGGCCGATGAACTGGCCGTATGCCGGCCC
TTCGTCGACCGGTTTATCGAGGTTTCCAGGCCCAGGCTGATCGTTGCGGCCGGGGGCATTCCGGCGGTTTCGCTGCTCGG
CAGCCGCGAGGGAATCATGAAGCTGCGCGGGAATGAATACTGTTACACGACGCCGGGCGGTTATCGCGTTCCCCTGATTC
CCATGCTGCATCCGGCCTATCTGCTGCGCCGCCCACAGGATAAAAGCCGCGCATGGCGCGACCTTCTCCTGATTGAAAAA
CGGCTGGGCGAACTGGAGTAG

Upstream 100 bases:

>100_bases
TTAGCACTTACAGCCTGTTTCCCGAAGGTCCAGCCTGTCCGCAATGTCACCCCCTGCGTCAAGAGCGCCAATTTCTGCCC
TCACCGACTGGTGGGAGGCT

Downstream 100 bases:

>100_bases
TTATTCCTCCAGCGCCTCTTCGGCCTTGTCATCGACGAGCTTGCGTTCTTCCTTCTTGCGTTCGGAGAACTCCGCTTCGA
TTTCACCGCTCTTGTCAGGG

Product: uracil-DNA glycosylase

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; DNA Polymerase Bacteriophage-Type; Uracil DNA Glycosylase Superfamily Protein; DNA Polymerase-Related Protein; DNA Polymerase-Related Protein Bacteriophage-Type; DNA Glycosylase; DNA-Directed DNA Polymerase; Bacteriophage-Related DNA Polymerase; N-Terminus Of Bacteriophage-Type DNA Polymerase; Phage Spo1 DNA Polymerase-Related Protein; Phage DNA Polymerase; Uracil-DNA Glycosylase C-Terminal Domain Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; DNA Polymerase Bacteriophage-Type Protein; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Polymerase Domain-Containing Protein; Uracil-DNA Glycosylase C-Terminal; Phage SpO1 DNA Polymerase-Related Protein; Uracil-DNA Glycosylase Family 4 Protein; Arginine Biosynthesis Bifunctional Protein ArgJ; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil-DNA Glycosylase Phage-Related Protein; Phage Shock Protein E; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein; N-Terminus Of Phage SPO1 DNA Polymerase

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MGVAVDAPLVEALLAAAPALPDAPEQAQALEPAPLRKRGARTVADWVREAETIAAGCANLDELTAAAGQFSGSPLRASCE
NTVVYDGTPGASLLVIGEGPGAQEDRQGKPFVGKAGQLLDKMLAAIGRNRAENALITNVNYWRPPGNRSPEADELAVCRP
FVDRFIEVSRPRLIVAAGGIPAVSLLGSREGIMKLRGNEYCYTTPGGYRVPLIPMLHPAYLLRRPQDKSRAWRDLLLIEK
RLGELE

Sequences:

>Translated_246_residues
MGVAVDAPLVEALLAAAPALPDAPEQAQALEPAPLRKRGARTVADWVREAETIAAGCANLDELTAAAGQFSGSPLRASCE
NTVVYDGTPGASLLVIGEGPGAQEDRQGKPFVGKAGQLLDKMLAAIGRNRAENALITNVNYWRPPGNRSPEADELAVCRP
FVDRFIEVSRPRLIVAAGGIPAVSLLGSREGIMKLRGNEYCYTTPGGYRVPLIPMLHPAYLLRRPQDKSRAWRDLLLIEK
RLGELE
>Mature_245_residues
GVAVDAPLVEALLAAAPALPDAPEQAQALEPAPLRKRGARTVADWVREAETIAAGCANLDELTAAAGQFSGSPLRASCEN
TVVYDGTPGASLLVIGEGPGAQEDRQGKPFVGKAGQLLDKMLAAIGRNRAENALITNVNYWRPPGNRSPEADELAVCRPF
VDRFIEVSRPRLIVAAGGIPAVSLLGSREGIMKLRGNEYCYTTPGGYRVPLIPMLHPAYLLRRPQDKSRAWRDLLLIEKR
LGELE

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 26384; Mature: 26252

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: PS00888 CNMP_BINDING_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVAVDAPLVEALLAAAPALPDAPEQAQALEPAPLRKRGARTVADWVREAETIAAGCANL
CCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCH
DELTAAAGQFSGSPLRASCENTVVYDGTPGASLLVIGEGPGAQEDRQGKPFVGKAGQLLD
HHHHHHHHCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHH
KMLAAIGRNRAENALITNVNYWRPPGNRSPEADELAVCRPFVDRFIEVSRPRLIVAAGGI
HHHHHHCCCCCCCEEEECCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCC
PAVSLLGSREGIMKLRGNEYCYTTPGGYRVPLIPMLHPAYLLRRPQDKSRAWRDLLLIEK
CHHHHHCCCCCCEEECCCEEEEECCCCCEECCHHHHCHHHHHCCCCHHHHHHHHHHHHHH
RLGELE
HHCCCC
>Mature Secondary Structure 
GVAVDAPLVEALLAAAPALPDAPEQAQALEPAPLRKRGARTVADWVREAETIAAGCANL
CCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCH
DELTAAAGQFSGSPLRASCENTVVYDGTPGASLLVIGEGPGAQEDRQGKPFVGKAGQLLD
HHHHHHHHCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHH
KMLAAIGRNRAENALITNVNYWRPPGNRSPEADELAVCRPFVDRFIEVSRPRLIVAAGGI
HHHHHHCCCCCCCEEEECCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCC
PAVSLLGSREGIMKLRGNEYCYTTPGGYRVPLIPMLHPAYLLRRPQDKSRAWRDLLLIEK
CHHHHHCCCCCCEEECCCEEEEECCCCCEECCHHHHCHHHHHCCCCHHHHHHHHHHHHHH
RLGELE
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA