| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798125
Identifier: 114798125
GI number: 114798125
Start: 1707522
End: 1708139
Strand: Direct
Name: 114798125
Synonym: HNE_1665
Alternate gene names: NA
Gene position: 1707522-1708139 (Clockwise)
Preceding gene: 114798878
Following gene: 114799422
Centisome position: 46.09
GC content: 61.49
Gene sequence:
>618_bases ATGCCCGATCTTCTCGAAAACACTCCGGATATTGGCGATACGGCCACCGAAACCGAGGATGGGCGTAAGCGCCGTTCGGA ACGGAGCCGTGAGCAGATCATCGAAGCGATGTTCGAGCTTGTACGCGGCGGCGAGCTGGACCCCGGCGCGGCGCGGATAG CCGAGGTTGCGAATGTCAGCCTGCGCACGGTGTTCCGTCACTTTGAGGAAGTCGACGGTCTCTATCTGGAGATGAACCGG CGGGTGAAAGCCGAAGTCATGCCCATCGTGGAGGCGCCTTTCAATGCCGACAACTGGCACGACAATGTGCTGGAGCTGGT CGGGCGCCGGTCTGAAGTGTTCGAGCGGATCATGCTGTTCCGTGTCTGTGGCAGCATTCGCCGGTACCGGTCGGCGTTTC TGATGCAGGGGCATCAGGATTTTGTGGCGCTGGAGCGCTCGATCCTGGATGCGGTGCTGCCCGAAGAGGTGCGCAAGAAT GTTGTGCTGGAGGCGGCGTTTGATTCGGTGCTCGGCTTTGATACGTGGCGGCGGCTGCGTCAGGATCGGGGCCTGACCGT GGAAGAAGCGCGCGCGACCATGCGCAAGCTTGTTGAAGCGCTGCTCGCGTCAGTCTGA
Upstream 100 bases:
>100_bases ATGAAAGAGGGCTTCCTGTCGCAACTCGGCATCTAGCCATAGGCAGGCGGGGACTTAACCGCTATTAAGGAGGCTGAAAC TGGCCTCGCAAGGATGTGGA
Downstream 100 bases:
>100_bases TCTGCAGACCCATGCGCGGGAGACTTGCCCTTCTGTCTTTATGCGCGATTGCCGCGTGTGGCGCGTCTTCTTCTGACGAT CCCGTCTCAGGGAGCTGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulatory Protein
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MPDLLENTPDIGDTATETEDGRKRRSERSREQIIEAMFELVRGGELDPGAARIAEVANVSLRTVFRHFEEVDGLYLEMNR RVKAEVMPIVEAPFNADNWHDNVLELVGRRSEVFERIMLFRVCGSIRRYRSAFLMQGHQDFVALERSILDAVLPEEVRKN VVLEAAFDSVLGFDTWRRLRQDRGLTVEEARATMRKLVEALLASV
Sequences:
>Translated_205_residues MPDLLENTPDIGDTATETEDGRKRRSERSREQIIEAMFELVRGGELDPGAARIAEVANVSLRTVFRHFEEVDGLYLEMNR RVKAEVMPIVEAPFNADNWHDNVLELVGRRSEVFERIMLFRVCGSIRRYRSAFLMQGHQDFVALERSILDAVLPEEVRKN VVLEAAFDSVLGFDTWRRLRQDRGLTVEEARATMRKLVEALLASV >Mature_204_residues PDLLENTPDIGDTATETEDGRKRRSERSREQIIEAMFELVRGGELDPGAARIAEVANVSLRTVFRHFEEVDGLYLEMNRR VKAEVMPIVEAPFNADNWHDNVLELVGRRSEVFERIMLFRVCGSIRRYRSAFLMQGHQDFVALERSILDAVLPEEVRKNV VLEAAFDSVLGFDTWRRLRQDRGLTVEEARATMRKLVEALLASV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23547; Mature: 23416
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDLLENTPDIGDTATETEDGRKRRSERSREQIIEAMFELVRGGELDPGAARIAEVANVS CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LRTVFRHFEEVDGLYLEMNRRVKAEVMPIVEAPFNADNWHDNVLELVGRRSEVFERIMLF HHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHH RVCGSIRRYRSAFLMQGHQDFVALERSILDAVLPEEVRKNVVLEAAFDSVLGFDTWRRLR HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QDRGLTVEEARATMRKLVEALLASV HHCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PDLLENTPDIGDTATETEDGRKRRSERSREQIIEAMFELVRGGELDPGAARIAEVANVS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LRTVFRHFEEVDGLYLEMNRRVKAEVMPIVEAPFNADNWHDNVLELVGRRSEVFERIMLF HHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHH RVCGSIRRYRSAFLMQGHQDFVALERSILDAVLPEEVRKNVVLEAAFDSVLGFDTWRRLR HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QDRGLTVEEARATMRKLVEALLASV HHCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA