| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is acsA [H]
Identifier: 114798116
GI number: 114798116
Start: 1428780
End: 1430726
Strand: Direct
Name: acsA [H]
Synonym: HNE_1402
Alternate gene names: 114798116
Gene position: 1428780-1430726 (Clockwise)
Preceding gene: 114797134
Following gene: 114797096
Centisome position: 38.56
GC content: 61.68
Gene sequence:
>1947_bases ATGAGCGACGATTCAAAAACGTATCCAGTTCCTGAAGCCTTTGCGAGCCAGGCAAACCTGACCCCGGAGAAATACCGGGA AATGTATGCCGCCTCCATCGCCGACCCCGCCGCTTTCTGGGGTGAGCAGGGCAAGCGTCTGGACTGGATGACGCCCTACA CCGTCGTCAAGGACGTCTCCTGGGAAACCGGAGACCTGCATGTCCGCTGGTATTCTGACGGCGTCCTCAACGTCACCGCC AACTGCATCGACCGCCATCTGGACACGCGCGGCGACAAGGCCGCTTTCATCTGGGAAGGCGACAAGCCGGGCGAGAGCCA CACCGTCACCTACCGCCAGCTTCACGCCTCTGTCAGCAAATTCGCCAACGTCCTGAAGGAACTCGGCGTCAAGAAGGGCG ACCGCGTCACCATCTACATGCCGATGATCCTTGAGGCCGCCTACGCCATGCTCGCCTGCGCGCGCATCGGCGCGGTCCAT TCGGTCGTCTTCGGCGGCTTCTCGCCTGAAGCGCTCGCGGGGCGCATTGTTGATTGCGGCTCCGAAGTTCTCATCACTGC CGATGAAGGCCTGCGCGGGGGCAAGAGCGTTCCGCTGAAAGTGAACGCAGACAAAGCCGCAGGCATTGCCGGCGGTACCG TTAAAAAGATGCTTGTCGTCAAGCGCACCGGCGGCAACGTCTCCATGACCGAAGGCCGCGACCACTGGCTGCACGAAATC GGCGCGACCGTTTCGGCAGATTGCCCGCCCGAGCCGATGAACGCGGAAGACCCGCTGTTCATTCTGTATACGTCGGGTTC CACGGGCAAGCCCAAAGGCGTGCTGCACACGACCGGCGGCTATCTCCTCTGGGCCTCGATGACGCATGAATACGTCTTTG ATCTCAAGGAAAACGACATCTTCTGGTGCTCAGCCGATGTCGGCTGGGTCACCGGCCACACCTACATCATCTATGGCCCG CTCGCGAATGGCGCCACCAGCGTGATGTTCGAAGGCGTGCCGACCTATCCGGACGCCAGCCGCTTCTGGCAGGTGTGCGA CAAGCATCAGGTCACGATCTTCTACACCGCGCCCACCGCCATCCGCGCCCTGATGCGTGAAGGCGAAGGGCCGGTGAACA AGACCTCCCGCAAATCCATCCGCCTCCTCGGCACGGTGGGCGAGCCGATCAACCCGGAAGCCTGGGAATGGTATTTCCAT GTCGTCGGCGAAGCCCGCTGCCCCATCGTGGATACCTGGTGGCAGACCGAGACCGGCGGCACACTGATCGTGCCTCTGCC AAACACCACGGATATGAAACCCGGCGCAGGCTCTCACCCCTTCTTCGGGATCAAGCCGATCCTCGTCGATGCCGATGGCA GGGAGCTTGAAGGCGCTGCCGATGGAAATCTTCTGATCACCGATAGCTGGCCCGGCCAGATGCGCACCGTATACGGAGAT CATCAGCGCTTCGTGGAAACCTATTTCACGGCCTATCCCGGCAAATACTTCACCGGCGATGGCTGCCGCCGCGACGCCGA TGGCTTCTACTGGATCACAGGCCGCGTAGATGACGTGATCAACGTCTCGGGCCACCGGATGGGCACGGCGGAAGTGGAAA GCGCCCTCGTCAGCCATGATGCCGTGGCCGAAGCCGCCGTCGTCGGCTATCCGCACGACATCAAGGGGCAGGGGATCTAT GCCTATGTCACCCTGCGGGCAGGCTGCGAGGCCGATGATGCCTTGCGCAAAAACCTCGTCGCTCATGTGCGCAATGAAAT CGGCCCGATTGCCTCGCCGGATCTCATCCAGTTCGCGCCGGGCCTGCCGAAAACCCGTTCGGGCAAGATCATGCGCCGCA TTCTGCGCAAGATCGCCGAGAACGAGTTCTCCAATCTGGGCGATACCTCCACCCTGGCTGAACCGGAAGTCGTGAAAGAC CTGATCGACAACCGCCAGAACCGTTGA
Upstream 100 bases:
>100_bases GTCCGCCGGGCAAGGGCGGTGCGATGGGGCGTTTCACCGTCTCGACAAAACATGCATTCTGGGGGAAAGCCCCGGAGAAA TTACGAAGGGAATGCCGGTC
Downstream 100 bases:
>100_bases TCAGGAACCGCTAAATCTTCGCGCGGCCATCAAGGCTTTATTATCCCTGTCATGGGCATAAGCTCTGCTTCTATGCCTGC TGAGGGGAGCCTGCATGGCC
Product: acetate--CoA ligase
Products: NA
Alternate protein names: Acetate--CoA ligase; Acyl-activating enzyme [H]
Number of amino acids: Translated: 648; Mature: 647
Protein sequence:
>648_residues MSDDSKTYPVPEAFASQANLTPEKYREMYAASIADPAAFWGEQGKRLDWMTPYTVVKDVSWETGDLHVRWYSDGVLNVTA NCIDRHLDTRGDKAAFIWEGDKPGESHTVTYRQLHASVSKFANVLKELGVKKGDRVTIYMPMILEAAYAMLACARIGAVH SVVFGGFSPEALAGRIVDCGSEVLITADEGLRGGKSVPLKVNADKAAGIAGGTVKKMLVVKRTGGNVSMTEGRDHWLHEI GATVSADCPPEPMNAEDPLFILYTSGSTGKPKGVLHTTGGYLLWASMTHEYVFDLKENDIFWCSADVGWVTGHTYIIYGP LANGATSVMFEGVPTYPDASRFWQVCDKHQVTIFYTAPTAIRALMREGEGPVNKTSRKSIRLLGTVGEPINPEAWEWYFH VVGEARCPIVDTWWQTETGGTLIVPLPNTTDMKPGAGSHPFFGIKPILVDADGRELEGAADGNLLITDSWPGQMRTVYGD HQRFVETYFTAYPGKYFTGDGCRRDADGFYWITGRVDDVINVSGHRMGTAEVESALVSHDAVAEAAVVGYPHDIKGQGIY AYVTLRAGCEADDALRKNLVAHVRNEIGPIASPDLIQFAPGLPKTRSGKIMRRILRKIAENEFSNLGDTSTLAEPEVVKD LIDNRQNR
Sequences:
>Translated_648_residues MSDDSKTYPVPEAFASQANLTPEKYREMYAASIADPAAFWGEQGKRLDWMTPYTVVKDVSWETGDLHVRWYSDGVLNVTA NCIDRHLDTRGDKAAFIWEGDKPGESHTVTYRQLHASVSKFANVLKELGVKKGDRVTIYMPMILEAAYAMLACARIGAVH SVVFGGFSPEALAGRIVDCGSEVLITADEGLRGGKSVPLKVNADKAAGIAGGTVKKMLVVKRTGGNVSMTEGRDHWLHEI GATVSADCPPEPMNAEDPLFILYTSGSTGKPKGVLHTTGGYLLWASMTHEYVFDLKENDIFWCSADVGWVTGHTYIIYGP LANGATSVMFEGVPTYPDASRFWQVCDKHQVTIFYTAPTAIRALMREGEGPVNKTSRKSIRLLGTVGEPINPEAWEWYFH VVGEARCPIVDTWWQTETGGTLIVPLPNTTDMKPGAGSHPFFGIKPILVDADGRELEGAADGNLLITDSWPGQMRTVYGD HQRFVETYFTAYPGKYFTGDGCRRDADGFYWITGRVDDVINVSGHRMGTAEVESALVSHDAVAEAAVVGYPHDIKGQGIY AYVTLRAGCEADDALRKNLVAHVRNEIGPIASPDLIQFAPGLPKTRSGKIMRRILRKIAENEFSNLGDTSTLAEPEVVKD LIDNRQNR >Mature_647_residues SDDSKTYPVPEAFASQANLTPEKYREMYAASIADPAAFWGEQGKRLDWMTPYTVVKDVSWETGDLHVRWYSDGVLNVTAN CIDRHLDTRGDKAAFIWEGDKPGESHTVTYRQLHASVSKFANVLKELGVKKGDRVTIYMPMILEAAYAMLACARIGAVHS VVFGGFSPEALAGRIVDCGSEVLITADEGLRGGKSVPLKVNADKAAGIAGGTVKKMLVVKRTGGNVSMTEGRDHWLHEIG ATVSADCPPEPMNAEDPLFILYTSGSTGKPKGVLHTTGGYLLWASMTHEYVFDLKENDIFWCSADVGWVTGHTYIIYGPL ANGATSVMFEGVPTYPDASRFWQVCDKHQVTIFYTAPTAIRALMREGEGPVNKTSRKSIRLLGTVGEPINPEAWEWYFHV VGEARCPIVDTWWQTETGGTLIVPLPNTTDMKPGAGSHPFFGIKPILVDADGRELEGAADGNLLITDSWPGQMRTVYGDH QRFVETYFTAYPGKYFTGDGCRRDADGFYWITGRVDDVINVSGHRMGTAEVESALVSHDAVAEAAVVGYPHDIKGQGIYA YVTLRAGCEADDALRKNLVAHVRNEIGPIASPDLIQFAPGLPKTRSGKIMRRILRKIAENEFSNLGDTSTLAEPEVVKDL IDNRQNR
Specific function: Enables The Cell To Use Acetate During Aerobic Growth To Generate Energy Via The Tca Cycle, And Biosynthetic Compounds Via The Glyoxylate Shunt. Acetylates Chey, The Response Regulator Involved In Flagellar Movement And Chemotaxis. [C]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI8923896, Length=667, Percent_Identity=53.3733133433283, Blast_Score=708, Evalue=0.0, Organism=Homo sapiens, GI253970489, Length=680, Percent_Identity=52.2058823529412, Blast_Score=703, Evalue=0.0, Organism=Homo sapiens, GI28416953, Length=630, Percent_Identity=50.3174603174603, Blast_Score=639, Evalue=0.0, Organism=Homo sapiens, GI13375727, Length=625, Percent_Identity=37.28, Blast_Score=410, Evalue=1e-114, Organism=Homo sapiens, GI42544132, Length=528, Percent_Identity=28.9772727272727, Blast_Score=192, Evalue=6e-49, Organism=Homo sapiens, GI38505220, Length=607, Percent_Identity=29.8187808896211, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI122937307, Length=552, Percent_Identity=27.8985507246377, Blast_Score=182, Evalue=1e-45, Organism=Homo sapiens, GI31982927, Length=624, Percent_Identity=24.6794871794872, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI115511026, Length=540, Percent_Identity=27.5925925925926, Blast_Score=169, Evalue=1e-41, Organism=Homo sapiens, GI58082049, Length=526, Percent_Identity=26.615969581749, Blast_Score=153, Evalue=6e-37, Organism=Homo sapiens, GI157311624, Length=529, Percent_Identity=26.6540642722117, Blast_Score=144, Evalue=4e-34, Organism=Homo sapiens, GI157311622, Length=529, Percent_Identity=26.6540642722117, Blast_Score=144, Evalue=4e-34, Organism=Homo sapiens, GI195947378, Length=462, Percent_Identity=24.6753246753247, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI42544134, Length=347, Percent_Identity=25.3602305475504, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI40807357, Length=566, Percent_Identity=23.8515901060071, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI187761345, Length=383, Percent_Identity=25.5874673629243, Blast_Score=90, Evalue=7e-18, Organism=Homo sapiens, GI187761343, Length=383, Percent_Identity=25.5874673629243, Blast_Score=90, Evalue=7e-18, Organism=Homo sapiens, GI38524616, Length=544, Percent_Identity=22.6102941176471, Blast_Score=86, Evalue=2e-16, Organism=Homo sapiens, GI227499619, Length=562, Percent_Identity=22.0640569395018, Blast_Score=73, Evalue=8e-13, Organism=Escherichia coli, GI1790505, Length=640, Percent_Identity=60.9375, Blast_Score=837, Evalue=0.0, Organism=Escherichia coli, GI1786529, Length=623, Percent_Identity=38.0417335473515, Blast_Score=412, Evalue=1e-116, Organism=Escherichia coli, GI1788107, Length=572, Percent_Identity=23.9510489510489, Blast_Score=106, Evalue=6e-24, Organism=Escherichia coli, GI221142682, Length=536, Percent_Identity=22.5746268656716, Blast_Score=102, Evalue=8e-23, Organism=Escherichia coli, GI145693145, Length=541, Percent_Identity=23.8447319778189, Blast_Score=102, Evalue=1e-22, Organism=Escherichia coli, GI1786810, Length=525, Percent_Identity=21.5238095238095, Blast_Score=81, Evalue=3e-16, Organism=Caenorhabditis elegans, GI71983001, Length=650, Percent_Identity=50.6153846153846, Blast_Score=628, Evalue=1e-180, Organism=Caenorhabditis elegans, GI71982997, Length=644, Percent_Identity=50.6211180124224, Blast_Score=628, Evalue=1e-180, Organism=Caenorhabditis elegans, GI17569507, Length=655, Percent_Identity=23.0534351145038, Blast_Score=125, Evalue=7e-29, Organism=Caenorhabditis elegans, GI32563687, Length=553, Percent_Identity=22.6039783001808, Blast_Score=97, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17558820, Length=559, Percent_Identity=24.865831842576, Blast_Score=96, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17538037, Length=615, Percent_Identity=22.9268292682927, Blast_Score=95, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17560140, Length=390, Percent_Identity=22.0512820512821, Blast_Score=73, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6323182, Length=643, Percent_Identity=50.0777604976672, Blast_Score=633, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6319264, Length=639, Percent_Identity=47.4178403755869, Blast_Score=583, Evalue=1e-167, Organism=Saccharomyces cerevisiae, GI6319699, Length=367, Percent_Identity=23.7057220708447, Blast_Score=94, Evalue=7e-20, Organism=Drosophila melanogaster, GI24667955, Length=643, Percent_Identity=54.1213063763608, Blast_Score=696, Evalue=0.0, Organism=Drosophila melanogaster, GI62472339, Length=562, Percent_Identity=57.8291814946619, Blast_Score=651, Evalue=0.0, Organism=Drosophila melanogaster, GI24667959, Length=520, Percent_Identity=58.0769230769231, Blast_Score=608, Evalue=1e-174, Organism=Drosophila melanogaster, GI21355225, Length=614, Percent_Identity=36.4820846905537, Blast_Score=367, Evalue=1e-101, Organism=Drosophila melanogaster, GI18859661, Length=527, Percent_Identity=22.7703984819734, Blast_Score=99, Evalue=7e-21, Organism=Drosophila melanogaster, GI21355181, Length=523, Percent_Identity=23.9005736137667, Blast_Score=99, Evalue=8e-21, Organism=Drosophila melanogaster, GI24656500, Length=375, Percent_Identity=23.2, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24648257, Length=364, Percent_Identity=24.1758241758242, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24581924, Length=369, Percent_Identity=23.3062330623306, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011904 - InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.1 [H]
Molecular weight: Translated: 71037; Mature: 70906
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDSKTYPVPEAFASQANLTPEKYREMYAASIADPAAFWGEQGKRLDWMTPYTVVKDVS CCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCCCCCEEECCCCHHHHCCCC WETGDLHVRWYSDGVLNVTANCIDRHLDTRGDKAAFIWEGDKPGESHTVTYRQLHASVSK CCCCCEEEEEECCCEEEEEHHHHHHHHCCCCCEEEEEECCCCCCCCCEEHHHHHHHHHHH FANVLKELGVKKGDRVTIYMPMILEAAYAMLACARIGAVHSVVFGGFSPEALAGRIVDCG HHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECC SEVLITADEGLRGGKSVPLKVNADKAAGIAGGTVKKMLVVKRTGGNVSMTEGRDHWLHEI CCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCCEEECCCCHHHHHHH GATVSADCPPEPMNAEDPLFILYTSGSTGKPKGVLHTTGGYLLWASMTHEYVFDLKENDI CCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCEEEEEECCCEEEEEECCCCE FWCSADVGWVTGHTYIIYGPLANGATSVMFEGVPTYPDASRFWQVCDKHQVTIFYTAPTA EEEECCCCEEECCEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHCCCCEEEEEECHHH IRALMREGEGPVNKTSRKSIRLLGTVGEPINPEAWEWYFHVVGEARCPIVDTWWQTETGG HHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCHHEEEEEEECCCCCCEEECCEECCCCC TLIVPLPNTTDMKPGAGSHPFFGIKPILVDADGRELEGAADGNLLITDSWPGQMRTVYGD EEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCEEEECCH HQRFVETYFTAYPGKYFTGDGCRRDADGFYWITGRVDDVINVSGHRMGTAEVESALVSHD HHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHHH AVAEAAVVGYPHDIKGQGIYAYVTLRAGCEADDALRKNLVAHVRNEIGPIASPDLIQFAP HHHHHHEECCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCC GLPKTRSGKIMRRILRKIAENEFSNLGDTSTLAEPEVVKDLIDNRQNR CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure SDDSKTYPVPEAFASQANLTPEKYREMYAASIADPAAFWGEQGKRLDWMTPYTVVKDVS CCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCCCCCEEECCCCHHHHCCCC WETGDLHVRWYSDGVLNVTANCIDRHLDTRGDKAAFIWEGDKPGESHTVTYRQLHASVSK CCCCCEEEEEECCCEEEEEHHHHHHHHCCCCCEEEEEECCCCCCCCCEEHHHHHHHHHHH FANVLKELGVKKGDRVTIYMPMILEAAYAMLACARIGAVHSVVFGGFSPEALAGRIVDCG HHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECC SEVLITADEGLRGGKSVPLKVNADKAAGIAGGTVKKMLVVKRTGGNVSMTEGRDHWLHEI CCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCCEEECCCCHHHHHHH GATVSADCPPEPMNAEDPLFILYTSGSTGKPKGVLHTTGGYLLWASMTHEYVFDLKENDI CCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCEEEEEECCCEEEEEECCCCE FWCSADVGWVTGHTYIIYGPLANGATSVMFEGVPTYPDASRFWQVCDKHQVTIFYTAPTA EEEECCCCEEECCEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHCCCCEEEEEECHHH IRALMREGEGPVNKTSRKSIRLLGTVGEPINPEAWEWYFHVVGEARCPIVDTWWQTETGG HHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCHHEEEEEEECCCCCCEEECCEECCCCC TLIVPLPNTTDMKPGAGSHPFFGIKPILVDADGRELEGAADGNLLITDSWPGQMRTVYGD EEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCEEEECCH HQRFVETYFTAYPGKYFTGDGCRRDADGFYWITGRVDDVINVSGHRMGTAEVESALVSHD HHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHHH AVAEAAVVGYPHDIKGQGIYAYVTLRAGCEADDALRKNLVAHVRNEIGPIASPDLIQFAP HHHHHHEECCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCC GLPKTRSGKIMRRILRKIAENEFSNLGDTSTLAEPEVVKDLIDNRQNR CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA