| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is exoO [H]
Identifier: 114797096
GI number: 114797096
Start: 1430821
End: 1431798
Strand: Direct
Name: exoO [H]
Synonym: HNE_1403
Alternate gene names: 114797096
Gene position: 1430821-1431798 (Clockwise)
Preceding gene: 114798116
Following gene: 114797907
Centisome position: 38.62
GC content: 65.13
Gene sequence:
>978_bases ATGGCCGCGCCAAAGGTTTCTGTTGTGATGCCCGCCTACAAGGCTGCCGGCTTCATCGCCTTGGCAATCGCCAGCGTGCG CGCGCAAACCCTGCCGGACTGGGAACTGATCATCGTGGACGATTGCTCGCCCGATGACACCGCCGCTGTGGCCATGGCGG CGGCTGGCGGTGATCCGCGCGTGAAACTCGTCCGGGCAGACCAGAATGGCGGCGTCGCCCGCGCCCGAAACCTCGGCAAC AGCCATGCTAAGGGCGACTGGATTGCCGTGCTGGATTCCGATGACGCGTTCGAGCCCGCTCGTCTGGAAACGCTTGTCGC GGCTGCCGAAGCTGCGGGGCTCGATCTGATCGCAGACGATCTGCGCCTCGTCCCGTTCGAAAATATCACGGCGGAAGGCA CCCCCTTTCTGGGGCGTGCGGACGAAACGCTTCAGCCCATAAATCTCGCGCAATGGCTCGACGGCAACCGCGCGGAGTCC AGATCGCCCATCCTTGGCTATCTCAAACCTGTTATCCGGCGGGCATTTTTGCTCCGCCACAACATTGAATATCTGCCCGA GCTGAAAGTCGCCGAGGATTGCTGGTTTGTGGCAGACCTTCTGGCCAACGGCGCCCGCTTCGCGATCCATCCGCAGGCGC TTTACCGCTACGCCATTCGCCCGGCCTCGCTTTCCCGCACCCGTGGCCAGAATGTGTTCACGATGCAGCGCCCGGTCTAT GCGCCCTTCCTGGAGCGTCATGCCGCCCGCCTTTCCGAGGCAGACCGCCGCGCCGTTGCCCGCCATCAGGCTGCCCTGCG CGATGCAGAAGCGTTCGAGGGGTTCGTGATGGCTCTGCGCCAGCGCCAGCTTCCCGCGGCCTTCGGCTGGCTTGCCGGGC GCCCGCAGGCGCTGCGTTTCTTTGCAAAGCCCGTCGGTGTGCGGCTGGAGCGTGTGGCGAAACGTTTCGGGTATCGCCCG CGCGCGCGCGTCAGCTAG
Upstream 100 bases:
>100_bases CGTTGATCAGGAACCGCTAAATCTTCGCGCGGCCATCAAGGCTTTATTATCCCTGTCATGGGCATAAGCTCTGCTTCTAT GCCTGCTGAGGGGAGCCTGC
Downstream 100 bases:
>100_bases ATCGCAGGCAAGTCTACCGTAAACCGCGCGCCGCCCTCTGGCCGGTTCTCCGCCCAGACTTGCCCGCGATGGGTCGCCAC AATCTGTTTCACGATAGAAA
Product: glycosyl transferase group 2 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MAAPKVSVVMPAYKAAGFIALAIASVRAQTLPDWELIIVDDCSPDDTAAVAMAAAGGDPRVKLVRADQNGGVARARNLGN SHAKGDWIAVLDSDDAFEPARLETLVAAAEAAGLDLIADDLRLVPFENITAEGTPFLGRADETLQPINLAQWLDGNRAES RSPILGYLKPVIRRAFLLRHNIEYLPELKVAEDCWFVADLLANGARFAIHPQALYRYAIRPASLSRTRGQNVFTMQRPVY APFLERHAARLSEADRRAVARHQAALRDAEAFEGFVMALRQRQLPAAFGWLAGRPQALRFFAKPVGVRLERVAKRFGYRP RARVS
Sequences:
>Translated_325_residues MAAPKVSVVMPAYKAAGFIALAIASVRAQTLPDWELIIVDDCSPDDTAAVAMAAAGGDPRVKLVRADQNGGVARARNLGN SHAKGDWIAVLDSDDAFEPARLETLVAAAEAAGLDLIADDLRLVPFENITAEGTPFLGRADETLQPINLAQWLDGNRAES RSPILGYLKPVIRRAFLLRHNIEYLPELKVAEDCWFVADLLANGARFAIHPQALYRYAIRPASLSRTRGQNVFTMQRPVY APFLERHAARLSEADRRAVARHQAALRDAEAFEGFVMALRQRQLPAAFGWLAGRPQALRFFAKPVGVRLERVAKRFGYRP RARVS >Mature_324_residues AAPKVSVVMPAYKAAGFIALAIASVRAQTLPDWELIIVDDCSPDDTAAVAMAAAGGDPRVKLVRADQNGGVARARNLGNS HAKGDWIAVLDSDDAFEPARLETLVAAAEAAGLDLIADDLRLVPFENITAEGTPFLGRADETLQPINLAQWLDGNRAESR SPILGYLKPVIRRAFLLRHNIEYLPELKVAEDCWFVADLLANGARFAIHPQALYRYAIRPASLSRTRGQNVFTMQRPVYA PFLERHAARLSEADRRAVARHQAALRDAEAFEGFVMALRQRQLPAAFGWLAGRPQALRFFAKPVGVRLERVAKRFGYRPR ARVS
Specific function: Glycosyltransferase required for the synthesis of succinoglycan (EPS I). Needed for the addition of the fifth sugar (glucose), catalyzes the formation of a beta-1,6 linkage between the fourth and fifth sugar [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1790044, Length=240, Percent_Identity=25.4166666666667, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1788372, Length=107, Percent_Identity=34.5794392523364, Blast_Score=76, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 35728; Mature: 35597
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPKVSVVMPAYKAAGFIALAIASVRAQTLPDWELIIVDDCSPDDTAAVAMAAAGGDPR CCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHEEEEECCCCCE VKLVRADQNGGVARARNLGNSHAKGDWIAVLDSDDAFEPARLETLVAAAEAAGLDLIADD EEEEEECCCCCHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEECCC LRLVPFENITAEGTPFLGRADETLQPINLAQWLDGNRAESRSPILGYLKPVIRRAFLLRH CEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH NIEYLPELKVAEDCWFVADLLANGARFAIHPQALYRYAIRPASLSRTRGQNVFTMQRPVY CHHHCCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCHHHHHCCCCEEEECCCCH APFLERHAARLSEADRRAVARHQAALRDAEAFEGFVMALRQRQLPAAFGWLAGRPQALRF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHH FAKPVGVRLERVAKRFGYRPRARVS HHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AAPKVSVVMPAYKAAGFIALAIASVRAQTLPDWELIIVDDCSPDDTAAVAMAAAGGDPR CCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHEEEEECCCCCE VKLVRADQNGGVARARNLGNSHAKGDWIAVLDSDDAFEPARLETLVAAAEAAGLDLIADD EEEEEECCCCCHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEECCC LRLVPFENITAEGTPFLGRADETLQPINLAQWLDGNRAESRSPILGYLKPVIRRAFLLRH CEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH NIEYLPELKVAEDCWFVADLLANGARFAIHPQALYRYAIRPASLSRTRGQNVFTMQRPVY CHHHCCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCHHHHHCCCCEEEECCCCH APFLERHAARLSEADRRAVARHQAALRDAEAFEGFVMALRQRQLPAAFGWLAGRPQALRF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHH FAKPVGVRLERVAKRFGYRPRARVS HHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8226645; 8246891; 11481431 [H]