| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798095
Identifier: 114798095
GI number: 114798095
Start: 337074
End: 337463
Strand: Reverse
Name: 114798095
Synonym: HNE_0341
Alternate gene names: NA
Gene position: 337463-337074 (Counterclockwise)
Preceding gene: 114799543
Following gene: 114797646
Centisome position: 9.11
GC content: 66.41
Gene sequence:
>390_bases ATGAGCCTTCGATTTGTAGCAGCCGGCGCCTTTGCGCTTCTGGCGTCCGCCTGTGCGGGCTGGCCGGGGGCAAGCCCGGA CGCGGCCGTTACCGCGTGTGGCGGCGTGATGGCGCAGAGCGCGGCTTATGCTTCCAGCCACGCAGCCGCGCGGGAAGAGA AGCTGATGGTGATCCGCTTTGCCTCGCCAGAAGCCATGGCCGCTTATAATGCCAAGACGCGGGCCTATGAGGCGGAGGCG GCGGGTCTCGTGACCGCGCGAGACGCGCTGGCGGCGGACTATGGCCTCGCTGAGGATACGCAGGCCTACACATTCGATCA CACCACGGATGAAGAGGCAGACGCGCGGATTTCAGCGGCCAAGGCTTGCGCGGCGCCGCTGACTGAATGA
Upstream 100 bases:
>100_bases CGGATCCGTGCCTCGGGCACCGGATGGCGATGCGGTATGACCCCACGGGCGACGCGCCGAAACTCAGTGACCTGATCAAT GACCTTGTGAGGAAATCGGC
Downstream 100 bases:
>100_bases CGCCTGCCGCCGACCTTCGCGCAGAGGCCGAGAGCCTGGCCCGGCAATTGCCGGGGCTGAACTTCAGGGCGGAAGCTTCT GAGGCAGCCCATATCGGCTC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MSLRFVAAGAFALLASACAGWPGASPDAAVTACGGVMAQSAAYASSHAAAREEKLMVIRFASPEAMAAYNAKTRAYEAEA AGLVTARDALAADYGLAEDTQAYTFDHTTDEEADARISAAKACAAPLTE
Sequences:
>Translated_129_residues MSLRFVAAGAFALLASACAGWPGASPDAAVTACGGVMAQSAAYASSHAAAREEKLMVIRFASPEAMAAYNAKTRAYEAEA AGLVTARDALAADYGLAEDTQAYTFDHTTDEEADARISAAKACAAPLTE >Mature_128_residues SLRFVAAGAFALLASACAGWPGASPDAAVTACGGVMAQSAAYASSHAAAREEKLMVIRFASPEAMAAYNAKTRAYEAEAA GLVTARDALAADYGLAEDTQAYTFDHTTDEEADARISAAKACAAPLTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13141; Mature: 13009
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRFVAAGAFALLASACAGWPGASPDAAVTACGGVMAQSAAYASSHAAAREEKLMVIRF CCCEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE ASPEAMAAYNAKTRAYEAEAAGLVTARDALAADYGLAEDTQAYTFDHTTDEEADARISAA CCCCHHHHHCCCHHCCCCCCCCEEHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHH KACAAPLTE HHHCCCCCC >Mature Secondary Structure SLRFVAAGAFALLASACAGWPGASPDAAVTACGGVMAQSAAYASSHAAAREEKLMVIRF CCEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE ASPEAMAAYNAKTRAYEAEAAGLVTARDALAADYGLAEDTQAYTFDHTTDEEADARISAA CCCCHHHHHCCCHHCCCCCCCCEEHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHH KACAAPLTE HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA