| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797646
Identifier: 114797646
GI number: 114797646
Start: 336211
End: 337077
Strand: Reverse
Name: 114797646
Synonym: HNE_0340
Alternate gene names: NA
Gene position: 337077-336211 (Counterclockwise)
Preceding gene: 114798095
Following gene: 114800527
Centisome position: 9.1
GC content: 68.97
Gene sequence:
>867_bases ATGACGCCTGCCGCCGACCTTCGCGCAGAGGCCGAGAGCCTGGCCCGGCAATTGCCGGGGCTGAACTTCAGGGCGGAAGC TTCTGAGGCAGCCCATATCGGCTCGGCGGGACGGCGGCGCGCGGGGACGGGCGAGAACTTCTGGCAATACCGCCGCTTCA TGCAGGAAGACGCGCCGGGGCGTATTCACTGGCGCCGCTCGGCCAAGGGCACGGAGCTGTTCGTGCGCGAGAGCGAGCTG GAGACGGCGCGCACTGTACTGTTCTGGGCAGACGACGCGCCGGGCTTTCGCTGGAAGGGCGCGGGCGATCTGCGCACCAA GGCGGAGGAAGCGACCCTCCTGATGCTGACGATGGCGATCATGATGTCGCGCGACGGCGAGCGGATTGGCGCGCTGGGCT CTGGCCGCAATCCGAGCTTTGGCAAGCGGGCGGTGGACCGGCTGCTGGATGATCTTTTGCGCGGCACGCGCGGGCAGTTT CCGCCCCCGCCCCGCGCCAGCGCGACGATGGTGGTAGCGTCTGACTTTTATGATCCGCCTGCTGAATGGCAAGCGCGGCT GGGGCCGCTCGCCGGGCGCTGCCCGGAAGGCATATTGCTGGCGGTGTCGGCGCCGGTGGAGATTGCGTTTCCGTTTGAGG GACGCACGAAACTCTCCCGCCCCGGCACGGGCGACGAACGCATTCTGGGCCGGGCCGAGACGATGCGCGAGGAATATATG CGCCGGTTTACAGTGCAGCGCGAGGCGCTTTCGGGCCTTGCCGCGCGGATGGGCTGGGCGCTGGTGACGCATGTGACGGG GAGCCCGGCGCTTTCCGCCGCCGCGCGCCTGAAGGCGGAGATTGAACGGTTCGGGGTGGCGCGGTGA
Upstream 100 bases:
>100_bases TCGCTGAGGATACGCAGGCCTACACATTCGATCACACCACGGATGAAGAGGCAGACGCGCGGATTTCAGCGGCCAAGGCT TGCGCGGCGCCGCTGACTGA
Downstream 100 bases:
>100_bases CAGCCATCGGGCCTTTCCTGCTGGGGGCGCCGCTGGCGCTGTTTGCACTGCTGGCGTTGCCGCTGATCTGGTGGGTGCTG CGGGCGACGCCGCCGGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MTPAADLRAEAESLARQLPGLNFRAEASEAAHIGSAGRRRAGTGENFWQYRRFMQEDAPGRIHWRRSAKGTELFVRESEL ETARTVLFWADDAPGFRWKGAGDLRTKAEEATLLMLTMAIMMSRDGERIGALGSGRNPSFGKRAVDRLLDDLLRGTRGQF PPPPRASATMVVASDFYDPPAEWQARLGPLAGRCPEGILLAVSAPVEIAFPFEGRTKLSRPGTGDERILGRAETMREEYM RRFTVQREALSGLAARMGWALVTHVTGSPALSAAARLKAEIERFGVAR
Sequences:
>Translated_288_residues MTPAADLRAEAESLARQLPGLNFRAEASEAAHIGSAGRRRAGTGENFWQYRRFMQEDAPGRIHWRRSAKGTELFVRESEL ETARTVLFWADDAPGFRWKGAGDLRTKAEEATLLMLTMAIMMSRDGERIGALGSGRNPSFGKRAVDRLLDDLLRGTRGQF PPPPRASATMVVASDFYDPPAEWQARLGPLAGRCPEGILLAVSAPVEIAFPFEGRTKLSRPGTGDERILGRAETMREEYM RRFTVQREALSGLAARMGWALVTHVTGSPALSAAARLKAEIERFGVAR >Mature_287_residues TPAADLRAEAESLARQLPGLNFRAEASEAAHIGSAGRRRAGTGENFWQYRRFMQEDAPGRIHWRRSAKGTELFVRESELE TARTVLFWADDAPGFRWKGAGDLRTKAEEATLLMLTMAIMMSRDGERIGALGSGRNPSFGKRAVDRLLDDLLRGTRGQFP PPPRASATMVVASDFYDPPAEWQARLGPLAGRCPEGILLAVSAPVEIAFPFEGRTKLSRPGTGDERILGRAETMREEYMR RFTVQREALSGLAARMGWALVTHVTGSPALSAAARLKAEIERFGVAR
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31713; Mature: 31581
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPAADLRAEAESLARQLPGLNFRAEASEAAHIGSAGRRRAGTGENFWQYRRFMQEDAPG CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC RIHWRRSAKGTELFVRESELETARTVLFWADDAPGFRWKGAGDLRTKAEEATLLMLTMAI CEEEECCCCCCEEEEEHHHHHCEEEEEEECCCCCCCEECCCCCHHHHHHHHHHHHHHHHH MMSRDGERIGALGSGRNPSFGKRAVDRLLDDLLRGTRGQFPPPPRASATMVVASDFYDPP HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCC AEWQARLGPLAGRCPEGILLAVSAPVEIAFPFEGRTKLSRPGTGDERILGRAETMREEYM HHHHHHHCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH RRFTVQREALSGLAARMGWALVTHVTGSPALSAAARLKAEIERFGVAR HHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TPAADLRAEAESLARQLPGLNFRAEASEAAHIGSAGRRRAGTGENFWQYRRFMQEDAPG CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC RIHWRRSAKGTELFVRESELETARTVLFWADDAPGFRWKGAGDLRTKAEEATLLMLTMAI CEEEECCCCCCEEEEEHHHHHCEEEEEEECCCCCCCEECCCCCHHHHHHHHHHHHHHHHH MMSRDGERIGALGSGRNPSFGKRAVDRLLDDLLRGTRGQFPPPPRASATMVVASDFYDPP HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCC AEWQARLGPLAGRCPEGILLAVSAPVEIAFPFEGRTKLSRPGTGDERILGRAETMREEYM HHHHHHHCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH RRFTVQREALSGLAARMGWALVTHVTGSPALSAAARLKAEIERFGVAR HHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA