| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is yagG [C]
Identifier: 114798092
GI number: 114798092
Start: 2805577
End: 2807022
Strand: Reverse
Name: yagG [C]
Synonym: HNE_2645
Alternate gene names: 114798092
Gene position: 2807022-2805577 (Counterclockwise)
Preceding gene: 114798973
Following gene: 114797410
Centisome position: 75.76
GC content: 61.48
Gene sequence:
>1446_bases ATGGCGGTGACCCAGTCCGGTAAGCCGGGCCTATTTACGCGCGTATCGTTCGGTATCGGCGGCGCGGCAGATGGCATCAA GAATAACGGCTTCGATTACGCGCTCCTGTTCTTCTACAGCAACATCATGGGCGTCGATGCCGGCCTTGTCGGCCTCGCGC TGCTGATTGCGCTGATCGTTGATGCGGTGTCAGATCCCGTCGTCGGCTACTGGTCGGACAACATGCGCACGCGCTTCGGG CGCCGCCACCCTTTCATGTATGCCGCGCTGATCCCCACGGCGGTGACATACTTCCTCACCTGGAACCCGCCCGCGGGCAT GGACGGTAACGATCTCTTCCCCTGGCTGGTGGCCACCACCATCCTCGTCCGCCTCAGCTTCACCTTCTATGATGTGCCCA GCTCCGCCCTCTCGGCCGAGCTGACGTCCGACTATGACGAGCGCACCTCGCTGATGTCGCTGCGCTATTTCTTCGGCTGG TTCGGCGGCCTGACGATCCAGATCCTGCTGTTCCGTTTCCTGCTGGTGCCTACGGAGGAAATCCCGGTCGGCGTCTTCAA CATTGAGGGCTGGAAAACCTACGGCTTCATCTCGGCGATCTGCATATTCCTGGCCGTCGCCATCTGCGCAGGCGGCACGC ACAGCCACATTCCGAACCTGAAAGCTGCCCCACCGGCGCGCAATCTCACCATCGGGCGCATCTTCGCGGAAATCTTCGAG ACGATCTCCAACCCGTCTTTCCGCGCGCTGTTCATCGCCACGCTCTGCGGCCTGATCGCTACGGGCATCTCGGCGACGCT TAACCAGTATATCAACACCATCTTCTGGGAGTTCGATAACACCCAGATCGCCAACCTCACGATGGGTGTCTACATCTCGG CGGTCCTTGCCCTGATCATTGCGCCCCTCGTCGGCAAGACCTTCGGCAAGAAGCGCGGCGCCATGACCATCGGTGCGCTC GCCTTCACCATCGCGCCGCTCCCGGTCTTCCTGCGCCTCTTCGGCCTCCTGCCGCCCAATGGCTCGGACGAGCTGTTCCT GATCGTCATCTCGATCACGATCTTCGACCTCTCCCTCATCATCGCCACGCAGATGCTGCTGGGCTCCATGGTGGCGGATA TTGTGGAAGATTCGGAGTTGCAGACGGGCCGGCGCTCGGAAGGCATTTTCTTTGCCGGCATCAGCTTCATCCGCAAACTT TCGCAAGGGGCAGGGGTTATCACGGCCTCGATGGTGCTGGCCGTGGCCGGCCTGTCCCAGGGCGGTGGCGTCGAGGCAGC GACTCAGGATGAGATTCGCATGCTCGGCTGGGGCTATGGCCTCTCGCTGATCACGGCCTGGACCCTGATGCTCATCTGCA TCAGCTTCTACCGGATCAGCCGCGAGAGCCATGCCGACAACCTCGAAAAGCTGAAAGTGCGGCAGGCACAACAGGATGCA GGCTGA
Upstream 100 bases:
>100_bases TTTACGCTGGGTCCAACGAGATCCAGCGCAACATCATAGCGAAGATGGTGCTCGGCCTCTGAGGGCCGAAGCAACACGCA GCAAATTTCGGGAGGAATCA
Downstream 100 bases:
>100_bases CAGGCTATCGCCGCCGCAGGGAGCAGAAACACTTCCCTGCGGCGGTATGACCTGTCTGAAATGTCATGCGGGCGCGATTG CGCCATAATTCGCTCCGCAA
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 481; Mature: 480
Protein sequence:
>481_residues MAVTQSGKPGLFTRVSFGIGGAADGIKNNGFDYALLFFYSNIMGVDAGLVGLALLIALIVDAVSDPVVGYWSDNMRTRFG RRHPFMYAALIPTAVTYFLTWNPPAGMDGNDLFPWLVATTILVRLSFTFYDVPSSALSAELTSDYDERTSLMSLRYFFGW FGGLTIQILLFRFLLVPTEEIPVGVFNIEGWKTYGFISAICIFLAVAICAGGTHSHIPNLKAAPPARNLTIGRIFAEIFE TISNPSFRALFIATLCGLIATGISATLNQYINTIFWEFDNTQIANLTMGVYISAVLALIIAPLVGKTFGKKRGAMTIGAL AFTIAPLPVFLRLFGLLPPNGSDELFLIVISITIFDLSLIIATQMLLGSMVADIVEDSELQTGRRSEGIFFAGISFIRKL SQGAGVITASMVLAVAGLSQGGGVEAATQDEIRMLGWGYGLSLITAWTLMLICISFYRISRESHADNLEKLKVRQAQQDA G
Sequences:
>Translated_481_residues MAVTQSGKPGLFTRVSFGIGGAADGIKNNGFDYALLFFYSNIMGVDAGLVGLALLIALIVDAVSDPVVGYWSDNMRTRFG RRHPFMYAALIPTAVTYFLTWNPPAGMDGNDLFPWLVATTILVRLSFTFYDVPSSALSAELTSDYDERTSLMSLRYFFGW FGGLTIQILLFRFLLVPTEEIPVGVFNIEGWKTYGFISAICIFLAVAICAGGTHSHIPNLKAAPPARNLTIGRIFAEIFE TISNPSFRALFIATLCGLIATGISATLNQYINTIFWEFDNTQIANLTMGVYISAVLALIIAPLVGKTFGKKRGAMTIGAL AFTIAPLPVFLRLFGLLPPNGSDELFLIVISITIFDLSLIIATQMLLGSMVADIVEDSELQTGRRSEGIFFAGISFIRKL SQGAGVITASMVLAVAGLSQGGGVEAATQDEIRMLGWGYGLSLITAWTLMLICISFYRISRESHADNLEKLKVRQAQQDA G >Mature_480_residues AVTQSGKPGLFTRVSFGIGGAADGIKNNGFDYALLFFYSNIMGVDAGLVGLALLIALIVDAVSDPVVGYWSDNMRTRFGR RHPFMYAALIPTAVTYFLTWNPPAGMDGNDLFPWLVATTILVRLSFTFYDVPSSALSAELTSDYDERTSLMSLRYFFGWF GGLTIQILLFRFLLVPTEEIPVGVFNIEGWKTYGFISAICIFLAVAICAGGTHSHIPNLKAAPPARNLTIGRIFAEIFET ISNPSFRALFIATLCGLIATGISATLNQYINTIFWEFDNTQIANLTMGVYISAVLALIIAPLVGKTFGKKRGAMTIGALA FTIAPLPVFLRLFGLLPPNGSDELFLIVISITIFDLSLIIATQMLLGSMVADIVEDSELQTGRRSEGIFFAGISFIRKLS QGAGVITASMVLAVAGLSQGGGVEAATQDEIRMLGWGYGLSLITAWTLMLICISFYRISRESHADNLEKLKVRQAQQDAG
Specific function: Unknown
COG id: COG2211
COG function: function code G; Na+/melibiose symporter and related transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]
Homologues:
Organism=Homo sapiens, GI122937339, Length=445, Percent_Identity=25.1685393258427, Blast_Score=80, Evalue=5e-15, Organism=Escherichia coli, GI1786466, Length=484, Percent_Identity=22.9338842975207, Blast_Score=100, Evalue=4e-22, Organism=Escherichia coli, GI87082306, Length=426, Percent_Identity=24.1784037558685, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI48994989, Length=497, Percent_Identity=24.3460764587525, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI1790561, Length=151, Percent_Identity=27.8145695364238, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016196 - InterPro: IPR001927 - InterPro: IPR018043 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52174; Mature: 52042
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTQSGKPGLFTRVSFGIGGAADGIKNNGFDYALLFFYSNIMGVDAGLVGLALLIALIV CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH DAVSDPVVGYWSDNMRTRFGRRHPFMYAALIPTAVTYFLTWNPPAGMDGNDLFPWLVATT HHHCCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHH ILVRLSFTFYDVPSSALSAELTSDYDERTSLMSLRYFFGWFGGLTIQILLFRFLLVPTEE HHHHHHHHEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IPVGVFNIEGWKTYGFISAICIFLAVAICAGGTHSHIPNLKAAPPARNLTIGRIFAEIFE CCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHH TISNPSFRALFIATLCGLIATGISATLNQYINTIFWEFDNTQIANLTMGVYISAVLALII HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEHHHHHHHHHHHHHHHH APLVGKTFGKKRGAMTIGALAFTIAPLPVFLRLFGLLPPNGSDELFLIVISITIFDLSLI HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHH IATQMLLGSMVADIVEDSELQTGRRSEGIFFAGISFIRKLSQGAGVITASMVLAVAGLSQ HHHHHHHHHHHHHHHHCCHHCCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC GGGVEAATQDEIRMLGWGYGLSLITAWTLMLICISFYRISRESHADNLEKLKVRQAQQDA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC G C >Mature Secondary Structure AVTQSGKPGLFTRVSFGIGGAADGIKNNGFDYALLFFYSNIMGVDAGLVGLALLIALIV CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH DAVSDPVVGYWSDNMRTRFGRRHPFMYAALIPTAVTYFLTWNPPAGMDGNDLFPWLVATT HHHCCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHH ILVRLSFTFYDVPSSALSAELTSDYDERTSLMSLRYFFGWFGGLTIQILLFRFLLVPTEE HHHHHHHHEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IPVGVFNIEGWKTYGFISAICIFLAVAICAGGTHSHIPNLKAAPPARNLTIGRIFAEIFE CCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHH TISNPSFRALFIATLCGLIATGISATLNQYINTIFWEFDNTQIANLTMGVYISAVLALII HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEHHHHHHHHHHHHHHHH APLVGKTFGKKRGAMTIGALAFTIAPLPVFLRLFGLLPPNGSDELFLIVISITIFDLSLI HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHH IATQMLLGSMVADIVEDSELQTGRRSEGIFFAGISFIRKLSQGAGVITASMVLAVAGLSQ HHHHHHHHHHHHHHHHCCHHCCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC GGGVEAATQDEIRMLGWGYGLSLITAWTLMLICISFYRISRESHADNLEKLKVRQAQQDA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]