| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798045
Identifier: 114798045
GI number: 114798045
Start: 1538885
End: 1539376
Strand: Direct
Name: 114798045
Synonym: HNE_1506
Alternate gene names: NA
Gene position: 1538885-1539376 (Clockwise)
Preceding gene: 114800061
Following gene: 114799398
Centisome position: 41.54
GC content: 56.1
Gene sequence:
>492_bases ATGCCTGCCCTCCTGGTGCCGCCTGCTACCTCGGCTGCCATTGCCTGCGCTCTGAGAGCAGGTGCGTTTCCAAGCTTTTC AGATTTCGTCACGCGGTCGCTCCAAAAGCCTGGCAGGCGAGGCGCTGTCGAAGCGATGCTACATGTAAACCGCGAGGTGT TCCGTACCCTGTTTATTGCTCTTCTGGTTGGAGGGGCAGCTATATCGCCCTTGATTGTGCTTATCGCGCTTCCCCATTCA GATAATGCTGCGCGCGTCTATGTTTTGGCTGGTAGCGCCATTTATCTTGTCGCCGTGTTTGCAGTTACGCTGTTGGGCAA TGTGCCCGCAAACATCCCGCTCGACCGATTGAACAGGCATTCGCCAGAAGTAGTCGTCTATTGGCCAGCGTTCTATTCCG GTTGGACAAATTACAATCACATTCGAACGGTGCGCGCTGCCGCGGCTGTCATCTGCTACCTGCTCGCCAGTCTCACTCTG GCCGCTTCGTGA
Upstream 100 bases:
>100_bases TCGGGAACAGCGTTTGACATAATTCATGCTTCCATTTGACATCGTGTAAAATAGATGCATTTTACACGATGTCAAATCAG AGTTTATCAAAGGAAGCCAG
Downstream 100 bases:
>100_bases TTGAGCCTGTTAAAAAAGGGAAACGCGCAATGCGAACAACGGTAACTTTGAAACTGATACTGACAGTCGCTGGTCTTGTC GGTCTTGGGGTGGGAATCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MPALLVPPATSAAIACALRAGAFPSFSDFVTRSLQKPGRRGAVEAMLHVNREVFRTLFIALLVGGAAISPLIVLIALPHS DNAARVYVLAGSAIYLVAVFAVTLLGNVPANIPLDRLNRHSPEVVVYWPAFYSGWTNYNHIRTVRAAAAVICYLLASLTL AAS
Sequences:
>Translated_163_residues MPALLVPPATSAAIACALRAGAFPSFSDFVTRSLQKPGRRGAVEAMLHVNREVFRTLFIALLVGGAAISPLIVLIALPHS DNAARVYVLAGSAIYLVAVFAVTLLGNVPANIPLDRLNRHSPEVVVYWPAFYSGWTNYNHIRTVRAAAAVICYLLASLTL AAS >Mature_162_residues PALLVPPATSAAIACALRAGAFPSFSDFVTRSLQKPGRRGAVEAMLHVNREVFRTLFIALLVGGAAISPLIVLIALPHSD NAARVYVLAGSAIYLVAVFAVTLLGNVPANIPLDRLNRHSPEVVVYWPAFYSGWTNYNHIRTVRAAAAVICYLLASLTLA AS
Specific function: Unknown
COG id: COG5500
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17354; Mature: 17222
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALLVPPATSAAIACALRAGAFPSFSDFVTRSLQKPGRRGAVEAMLHVNREVFRTLFIA CCCEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LLVGGAAISPLIVLIALPHSDNAARVYVLAGSAIYLVAVFAVTLLGNVPANIPLDRLNRH HHHCCHHHHHHHEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHCCC SPEVVVYWPAFYSGWTNYNHIRTVRAAAAVICYLLASLTLAAS CCCEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PALLVPPATSAAIACALRAGAFPSFSDFVTRSLQKPGRRGAVEAMLHVNREVFRTLFIA CCEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LLVGGAAISPLIVLIALPHSDNAARVYVLAGSAIYLVAVFAVTLLGNVPANIPLDRLNRH HHHCCHHHHHHHEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHCCC SPEVVVYWPAFYSGWTNYNHIRTVRAAAAVICYLLASLTLAAS CCCEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA