| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is ppc [C]
Identifier: 114798036
GI number: 114798036
Start: 1131719
End: 1134553
Strand: Direct
Name: ppc [C]
Synonym: HNE_1122
Alternate gene names: 114798036
Gene position: 1131719-1134553 (Clockwise)
Preceding gene: 114797136
Following gene: 114800444
Centisome position: 30.55
GC content: 65.89
Gene sequence:
>2835_bases ATGACGACGACACGTATCGAGCCGACCCTGGCGGCAGCCGGTGAGTATCTGCGCCAGCAGGCCGAACGGATCGAAGATGA TCCCATGACCAACTCGGTCTTCGCGCTGGCGCAAACGCTGTTTCGCGACATTGAGCAGGGGGAAACGGGCCTCGATGAAG TCGCCGGCCTGATCGAAGAAGCCCACCTCCTCGCCGTCAGTCAGCGCGCCGAACGCCTGCGCGAACGCCATTCCGGCGCG CGGCCGGAGGCGGTATGGCCCCAGGTGCAGGCGCGTCTCGAAAGCGTGGCGGCTGAAGGGATCGAAGCGTTCCGCGCCGC CGTGGAGCAGGCCCATGGCGGCGTTGTGTTCACCGCCCACCCGACCTTTTCCCTCTCACCGGAGCTGCGCGTCGCCATTG CCGGCGAAGCCGTGCGCCCTGGCGCGGACACCCGCGCAGCGCTGCAAAAGGCAATCCGCGCCGACGCCAGAGACTGGAAC CGCTCGATCACCCTGACCCGCGAGCATGAAGAGGCCCAGGCTGCGCTTCTCAACGCGGCCGGCGCTCAACGGCATTTTGC CGGTCTTATCTTCGATGTTGCCCGCGCGCAGTTTCCCGCCGATTGGCACGGGCTGCGGCCCGCCTTGCCCACGATTGCCA GCTGGGTCGGCTATGATCTCGACGGGCGCACAGACATCCAGTGGTATCATTCCATTACCTTCCGCCTGGCCGAAAAGGCT GAACAGCTGCGCCGGTATCACGCCCGTGTCGAGGCGATCCTGAACACCCATCCCGGCGCCGACAGTCTGGCGCAGCTGCT CGAGCGTCTCGAGCTGGCCGTTGGTGAGACTGCGATCCAGGCCGCCATGTTCAGCGGAGACCTTCAGGACCCGGACCACC TTGTCGACGCCGCCAACCGGCTGACGGCAGAGGGCCCCGGCCGCCTGACCAATGCAGGCGACATCCTTGCCGCGCTCGAC AGCGCGCTGACCGCCGCCGGTGACAACGCCGCGCTCGCCCGCGAGCTTCTCATCCTGCGCGCGCAAGTGGATAGCCAGCA GCTCGGCACCGGCCGCATCCATCTGCGCGTCAACGCCGCCCAGATCGCCAACGTCATCCGGCGGGAGCTGAACCTCGACG CCGATGAACGCAGCCTCGGCCGCCTCACCCTGACAGAGCTTTCCCGCCGCGCTGCCGTGCCAAAAGCGGTCGACGTGAAC TTCGCCGACCTCTTCCTGGAACAGTCTACCGCGCGCCGCCAGTTCATGATGTGCGCGCAGATCCTCAAGCATATCGATGC GGGCTCCCCCATCCGCTTCCTGATTGCCGAGAGCGAAAACCCCGCCACCGTCATGGCCGCGCTCTACCTCGCGCGCCATT ACGGCGTGAACGGAAATCTCGACATCTCGCCGCTGTTTGAAACACCTGAAGCGCTGGAAACCGGCGGCCGCTTCATCGAG CGCCTGCTGGATGAGCCGGAGTTTGCCACCTATGTCCGCCGCCGCGGGCATCTCTCGATCCAGCTCGGCTTTTCAGACTC CGGCCGCTTCATCGGCCAGATCGCCGGCAATATGGCGATCGAGCGTATCCATAATCTTATCTTGCGCGCCATGGCGCCCC GCGTGCCCGGCGCGGGCCTCCTGATCTTCAATACCCACGGGGAATCCATGGGCCGCGGCGCCTGGCCGGGCACCTTCGAG CAGCGCTTCGACCATCTGCTTACCCCGTGGACCCGCGCCAACGCTCATGAACTCGGCATACGGATTATCCACGAGTCGAG CTTCCAGGGCGGCGACGGCTATCTCCATTTCGCCACGCCCGAGCTTGCCGAAACCACGCTCGCGCACTGGTGCCTTCATC TCCTCGCTCCGCCACCGGAAAGCGCCGCCACCGATCCGTTCTACACCCGCACAGATCTCGTCTGGGATTTCTACCGTGCC CTGAGGGCCTGGCATGAACGCTTCTTTTCCAATGCCGATTATGGCCGCCTCCTGTCAGACTTCGCGCCCGGCTTTGTCGT CACCGCAGGTTCCCGCCAGACGCGGCGGCCATCAGGCGCCGCCGGCCCCCGCGCTCTACGCGCCATCTCCCACAATGCCG AGCTTCAACAGCTCGCCATCCCCCTCAACACCGCCTCGGGCATCGGCTCCTCCCTGCAACGGGAGACCGACCGCCTGGTT GACCTCGTCAATGCCAGCCCCCGGATGAGCAGCCTCGTCCAGCTTGCCTGGCGCGCCCGCCTGCTCACCAGCCTGCCGGT GCTGCGTGGCTATGCAGCGATCTACAATCCCGATGTCTGGATCGCCCATGCCCGCGCCGCCAGCCCGGAAGAAACCTCCG CCTATCGCGGCGTCTACTACGCCCTGCGCGACGGCGAGACGGCCCTCTCGGTCAACCGCACGGCCAATCTCCTCTCAATT GATCTCGACCGGTTCGACCGTCTTCTCGCGCGTCTGGATGAAGCGCCATCTACCGCCTCCCGCCACGAAGACCGCATCAA CCTCCACATCATCCACGGTGTCCGCCAGGCGCTGATGATGCGCGCCTTTGCGCTCGTCGGGAGACTGCCGCGTATTTCCG AACGCCACGACACCAGCCTGCGCGACATCATCCGCCTCGTCACCAGCCTGCGGATCGCCGAATGCGTAGAGCTGCTGTGC CGCATTTTCCCGCCGTCCCAGGACCGGTTGTCCCTGCTGTCGTCGCTGGAAGAGGCGGGCGGGGGCGAGAGCGGCCCCGG TCAGTATGGATACGACCATATCCACAGCCAGATCATCGGCCCGCTCGACCGGATCGACCAGATGCTGCACCAGATCAGCC TCGCCCTGAATCATCCCCATGACGCGGTCGGCTGA
Upstream 100 bases:
>100_bases GGATCGTACGCCGCGTCAGTCCTGGCCCTCGCTTCTGCGGGACTGGGGCGCTAACAAGGGCATATTCCCCAACGTCACTT CTGAATACTGAGCCAAACAT
Downstream 100 bases:
>100_bases AGTCAGACTGGCGTGTCTGCGACAACCAGCATCAAAAGGCATACCTTTCGTCAGGCCAATTGCGCTGCTACCACACCAAT AGGCAGGATCTGGTTAGCGG
Product: putative phosphoenolpyruvate carboxylase
Products: H+; Oxaloacetate; Phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 944; Mature: 943
Protein sequence:
>944_residues MTTTRIEPTLAAAGEYLRQQAERIEDDPMTNSVFALAQTLFRDIEQGETGLDEVAGLIEEAHLLAVSQRAERLRERHSGA RPEAVWPQVQARLESVAAEGIEAFRAAVEQAHGGVVFTAHPTFSLSPELRVAIAGEAVRPGADTRAALQKAIRADARDWN RSITLTREHEEAQAALLNAAGAQRHFAGLIFDVARAQFPADWHGLRPALPTIASWVGYDLDGRTDIQWYHSITFRLAEKA EQLRRYHARVEAILNTHPGADSLAQLLERLELAVGETAIQAAMFSGDLQDPDHLVDAANRLTAEGPGRLTNAGDILAALD SALTAAGDNAALARELLILRAQVDSQQLGTGRIHLRVNAAQIANVIRRELNLDADERSLGRLTLTELSRRAAVPKAVDVN FADLFLEQSTARRQFMMCAQILKHIDAGSPIRFLIAESENPATVMAALYLARHYGVNGNLDISPLFETPEALETGGRFIE RLLDEPEFATYVRRRGHLSIQLGFSDSGRFIGQIAGNMAIERIHNLILRAMAPRVPGAGLLIFNTHGESMGRGAWPGTFE QRFDHLLTPWTRANAHELGIRIIHESSFQGGDGYLHFATPELAETTLAHWCLHLLAPPPESAATDPFYTRTDLVWDFYRA LRAWHERFFSNADYGRLLSDFAPGFVVTAGSRQTRRPSGAAGPRALRAISHNAELQQLAIPLNTASGIGSSLQRETDRLV DLVNASPRMSSLVQLAWRARLLTSLPVLRGYAAIYNPDVWIAHARAASPEETSAYRGVYYALRDGETALSVNRTANLLSI DLDRFDRLLARLDEAPSTASRHEDRINLHIIHGVRQALMMRAFALVGRLPRISERHDTSLRDIIRLVTSLRIAECVELLC RIFPPSQDRLSLLSSLEEAGGGESGPGQYGYDHIHSQIIGPLDRIDQMLHQISLALNHPHDAVG
Sequences:
>Translated_944_residues MTTTRIEPTLAAAGEYLRQQAERIEDDPMTNSVFALAQTLFRDIEQGETGLDEVAGLIEEAHLLAVSQRAERLRERHSGA RPEAVWPQVQARLESVAAEGIEAFRAAVEQAHGGVVFTAHPTFSLSPELRVAIAGEAVRPGADTRAALQKAIRADARDWN RSITLTREHEEAQAALLNAAGAQRHFAGLIFDVARAQFPADWHGLRPALPTIASWVGYDLDGRTDIQWYHSITFRLAEKA EQLRRYHARVEAILNTHPGADSLAQLLERLELAVGETAIQAAMFSGDLQDPDHLVDAANRLTAEGPGRLTNAGDILAALD SALTAAGDNAALARELLILRAQVDSQQLGTGRIHLRVNAAQIANVIRRELNLDADERSLGRLTLTELSRRAAVPKAVDVN FADLFLEQSTARRQFMMCAQILKHIDAGSPIRFLIAESENPATVMAALYLARHYGVNGNLDISPLFETPEALETGGRFIE RLLDEPEFATYVRRRGHLSIQLGFSDSGRFIGQIAGNMAIERIHNLILRAMAPRVPGAGLLIFNTHGESMGRGAWPGTFE QRFDHLLTPWTRANAHELGIRIIHESSFQGGDGYLHFATPELAETTLAHWCLHLLAPPPESAATDPFYTRTDLVWDFYRA LRAWHERFFSNADYGRLLSDFAPGFVVTAGSRQTRRPSGAAGPRALRAISHNAELQQLAIPLNTASGIGSSLQRETDRLV DLVNASPRMSSLVQLAWRARLLTSLPVLRGYAAIYNPDVWIAHARAASPEETSAYRGVYYALRDGETALSVNRTANLLSI DLDRFDRLLARLDEAPSTASRHEDRINLHIIHGVRQALMMRAFALVGRLPRISERHDTSLRDIIRLVTSLRIAECVELLC RIFPPSQDRLSLLSSLEEAGGGESGPGQYGYDHIHSQIIGPLDRIDQMLHQISLALNHPHDAVG >Mature_943_residues TTTRIEPTLAAAGEYLRQQAERIEDDPMTNSVFALAQTLFRDIEQGETGLDEVAGLIEEAHLLAVSQRAERLRERHSGAR PEAVWPQVQARLESVAAEGIEAFRAAVEQAHGGVVFTAHPTFSLSPELRVAIAGEAVRPGADTRAALQKAIRADARDWNR SITLTREHEEAQAALLNAAGAQRHFAGLIFDVARAQFPADWHGLRPALPTIASWVGYDLDGRTDIQWYHSITFRLAEKAE QLRRYHARVEAILNTHPGADSLAQLLERLELAVGETAIQAAMFSGDLQDPDHLVDAANRLTAEGPGRLTNAGDILAALDS ALTAAGDNAALARELLILRAQVDSQQLGTGRIHLRVNAAQIANVIRRELNLDADERSLGRLTLTELSRRAAVPKAVDVNF ADLFLEQSTARRQFMMCAQILKHIDAGSPIRFLIAESENPATVMAALYLARHYGVNGNLDISPLFETPEALETGGRFIER LLDEPEFATYVRRRGHLSIQLGFSDSGRFIGQIAGNMAIERIHNLILRAMAPRVPGAGLLIFNTHGESMGRGAWPGTFEQ RFDHLLTPWTRANAHELGIRIIHESSFQGGDGYLHFATPELAETTLAHWCLHLLAPPPESAATDPFYTRTDLVWDFYRAL RAWHERFFSNADYGRLLSDFAPGFVVTAGSRQTRRPSGAAGPRALRAISHNAELQQLAIPLNTASGIGSSLQRETDRLVD LVNASPRMSSLVQLAWRARLLTSLPVLRGYAAIYNPDVWIAHARAASPEETSAYRGVYYALRDGETALSVNRTANLLSID LDRFDRLLARLDEAPSTASRHEDRINLHIIHGVRQALMMRAFALVGRLPRISERHDTSLRDIIRLVTSLRIAECVELLCR IFPPSQDRLSLLSSLEEAGGGESGPGQYGYDHIHSQIIGPLDRIDQMLHQISLALNHPHDAVG
Specific function: Through The Carboxylation Of Phosphoenolpyruvate (Pep) It Forms Oxaloacetate, A Four-Carbon Dicarboxylic Acid Source For The Tricarboxylic Acid Cycle. [C]
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.1.1.31 [C]
Molecular weight: Translated: 104085; Mature: 103954
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTRIEPTLAAAGEYLRQQAERIEDDPMTNSVFALAQTLFRDIEQGETGLDEVAGLIEE CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH AHLLAVSQRAERLRERHSGARPEAVWPQVQARLESVAAEGIEAFRAAVEQAHGGVVFTAH HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC PTFSLSPELRVAIAGEAVRPGADTRAALQKAIRADARDWNRSITLTREHEEAQAALLNAA CCEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHH GAQRHFAGLIFDVARAQFPADWHGLRPALPTIASWVGYDLDGRTDIQWYHSITFRLAEKA CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH EQLRRYHARVEAILNTHPGADSLAQLLERLELAVGETAIQAAMFSGDLQDPDHLVDAANR HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LTAEGPGRLTNAGDILAALDSALTAAGDNAALARELLILRAQVDSQQLGTGRIHLRVNAA CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHH QIANVIRRELNLDADERSLGRLTLTELSRRAAVPKAVDVNFADLFLEQSTARRQFMMCAQ HHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ILKHIDAGSPIRFLIAESENPATVMAALYLARHYGVNGNLDISPLFETPEALETGGRFIE HHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH RLLDEPEFATYVRRRGHLSIQLGFSDSGRFIGQIAGNMAIERIHNLILRAMAPRVPGAGL HHHCCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE LIFNTHGESMGRGAWPGTFEQRFDHLLTPWTRANAHELGIRIIHESSFQGGDGYLHFATP EEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCEEEEEECCCCCCCCEEEECCH ELAETTLAHWCLHLLAPPPESAATDPFYTRTDLVWDFYRALRAWHERFFSNADYGRLLSD HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH FAPGFVVTAGSRQTRRPSGAAGPRALRAISHNAELQQLAIPLNTASGIGSSLQRETDRLV CCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHHHEECCCCHHCCCHHHHHHHHHHH DLVNASPRMSSLVQLAWRARLLTSLPVLRGYAAIYNPDVWIAHARAASPEETSAYRGVYY HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCEEE ALRDGETALSVNRTANLLSIDLDRFDRLLARLDEAPSTASRHEDRINLHIIHGVRQALMM EEECCCEEEEECCCCCCEEECHHHHHHHHHHHHCCCCCHHCCCCCEEEEEHHHHHHHHHH RAFALVGRLPRISERHDTSLRDIIRLVTSLRIAECVELLCRIFPPSQDRLSLLSSLEEAG HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC GGESGPGQYGYDHIHSQIIGPLDRIDQMLHQISLALNHPHDAVG CCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TTTRIEPTLAAAGEYLRQQAERIEDDPMTNSVFALAQTLFRDIEQGETGLDEVAGLIEE CCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH AHLLAVSQRAERLRERHSGARPEAVWPQVQARLESVAAEGIEAFRAAVEQAHGGVVFTAH HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC PTFSLSPELRVAIAGEAVRPGADTRAALQKAIRADARDWNRSITLTREHEEAQAALLNAA CCEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHH GAQRHFAGLIFDVARAQFPADWHGLRPALPTIASWVGYDLDGRTDIQWYHSITFRLAEKA CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH EQLRRYHARVEAILNTHPGADSLAQLLERLELAVGETAIQAAMFSGDLQDPDHLVDAANR HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LTAEGPGRLTNAGDILAALDSALTAAGDNAALARELLILRAQVDSQQLGTGRIHLRVNAA CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHH QIANVIRRELNLDADERSLGRLTLTELSRRAAVPKAVDVNFADLFLEQSTARRQFMMCAQ HHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ILKHIDAGSPIRFLIAESENPATVMAALYLARHYGVNGNLDISPLFETPEALETGGRFIE HHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH RLLDEPEFATYVRRRGHLSIQLGFSDSGRFIGQIAGNMAIERIHNLILRAMAPRVPGAGL HHHCCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE LIFNTHGESMGRGAWPGTFEQRFDHLLTPWTRANAHELGIRIIHESSFQGGDGYLHFATP EEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCEEEEEECCCCCCCCEEEECCH ELAETTLAHWCLHLLAPPPESAATDPFYTRTDLVWDFYRALRAWHERFFSNADYGRLLSD HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH FAPGFVVTAGSRQTRRPSGAAGPRALRAISHNAELQQLAIPLNTASGIGSSLQRETDRLV CCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHHHEECCCCHHCCCHHHHHHHHHHH DLVNASPRMSSLVQLAWRARLLTSLPVLRGYAAIYNPDVWIAHARAASPEETSAYRGVYY HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCEEE ALRDGETALSVNRTANLLSIDLDRFDRLLARLDEAPSTASRHEDRINLHIIHGVRQALMM EEECCCEEEEECCCCCCEEECHHHHHHHHHHHHCCCCCHHCCCCCEEEEEHHHHHHHHHH RAFALVGRLPRISERHDTSLRDIIRLVTSLRIAECVELLCRIFPPSQDRLSLLSSLEEAG HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC GGESGPGQYGYDHIHSQIIGPLDRIDQMLHQISLALNHPHDAVG CCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: 2-Mercaptoethanol; Acetyl-CoA; Fructose diphosphate; GTP [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.6 {phosphoenolpyruvate}} 0.29 {phosphoenolpyruvate}} 0.19 {phosphoenolpyruvate}} 6.5 {HCO3-}} 0.55 {HCO3-}} 0.1 {HCO3-}} [C]
Substrates: CO2; H2O; Phosphoenolpyruvate [C]
Specific reaction: CO2 + H2O + Phosphoenolpyruvate --> H+ + Oxaloacetate + Phosphate [C]
General reaction: Carboxylation; Decarboxylation [C]
Inhibitor: 3-Mercaptopropionate; Cys; Fumarate; Malate [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA