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The map label for this gene is ybgK [H]

Identifier: 114797991

GI number: 114797991

Start: 2206312

End: 2207241

Strand: Reverse

Name: ybgK [H]

Synonym: HNE_2123

Alternate gene names: 114797991

Gene position: 2207241-2206312 (Counterclockwise)

Preceding gene: 114800075

Following gene: 114800271

Centisome position: 59.57

GC content: 65.16

Gene sequence:

>930_bases
ATGGTGCTGACCGTTCTCAAGTCCGGGCCGCTTGCGACATTACAGGGCCGCGCGCGTGAGGGGCTGCGCCATCAGGGCAT
TCCGGCCAGCGGCCCCGCAGACCCGCTCTCGATGGCGCTTGCCAACCGCCTTGTGGGGAACCCGCAGCAGGCGACCGCTC
TTGAGATAACATTTGGCGCAGCAGAGTTCGAATTCCATCAGGATACGGTATTCGCGTTCGCAGGCGCGGCAGCCGGCGCC
AGCCTTGCCGGCGCGCCGGTTCCCGCCCATCAAGCCCTGGAGGCGCGGCGAGGTGACCGTCTGGCCTTTGCCTATCCTTC
CGCCGGAGTGCGCAGCTATCTCGCCGTTCCGGCTGGTTTCGCTGCTGAGAATGTGTTCGACAGCACATCCACCTTTTTGC
CCGCCGCATTCGGCGGCTTTTCCGGCCGCGCGCTTCAGGCGGGTGATGTGCTGACCGGCGAGCGCGCCAGCGGGCCCGCT
CTCGACCTCACCACGCCGGCGGCGCTGCGGCCACACATGTCGCGCACCCATATCCTGAGATGTGTTCCGGGGCCGGACTT
CGAATCTATCGGCCCCGCCATCTGGCCGGAAACCTTCCAGACAACAAACCGGATGGACCGCACGGGTCTTGAGTTGTCCG
GACCCTGGCCACAGCCGCAGGACGGCGGCCAGAAGCCCAGCGCTGCCCTTTTCACCGGCGCCGTGCAGCTGACGCCCTCG
GGAAATGCGTTCGTCCTTCTTCCCGACGCCCAGACCACAGGCGGCTACCCGCATGTATTGCAGGTCATCCGGGCAGACCG
CCATCTGCTCGGCCAGATAGCGCCGGGTGATCGCGTCAGGTTTCTGAGGCGATCTGTAGACGAAGCATATGAAGACCTCA
GGGCGAAGACAGATTACTTCGCCGCGTGGCTTCCCGGATTTGCCTTTTAG

Upstream 100 bases:

>100_bases
ATCGGCGCTATCACCGAGCCGCTGTTTGACATACGCCGGGATGCGCCGTTCACACTGGAGGCGGGCATGCAGATCAAACT
GGCGATCGAGCGATAAGGCG

Downstream 100 bases:

>100_bases
GGCAGGGGTTGTTCTTCCCGGTCAGATGGCCCGTCCCGGCAACACCGCTCATCCATTTCGCGCTCACGGGTATGCGCCGC
GACCCACCAGGCGCCCAGGA

Product: allophanate hydrolase subunit 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MVLTVLKSGPLATLQGRAREGLRHQGIPASGPADPLSMALANRLVGNPQQATALEITFGAAEFEFHQDTVFAFAGAAAGA
SLAGAPVPAHQALEARRGDRLAFAYPSAGVRSYLAVPAGFAAENVFDSTSTFLPAAFGGFSGRALQAGDVLTGERASGPA
LDLTTPAALRPHMSRTHILRCVPGPDFESIGPAIWPETFQTTNRMDRTGLELSGPWPQPQDGGQKPSAALFTGAVQLTPS
GNAFVLLPDAQTTGGYPHVLQVIRADRHLLGQIAPGDRVRFLRRSVDEAYEDLRAKTDYFAAWLPGFAF

Sequences:

>Translated_309_residues
MVLTVLKSGPLATLQGRAREGLRHQGIPASGPADPLSMALANRLVGNPQQATALEITFGAAEFEFHQDTVFAFAGAAAGA
SLAGAPVPAHQALEARRGDRLAFAYPSAGVRSYLAVPAGFAAENVFDSTSTFLPAAFGGFSGRALQAGDVLTGERASGPA
LDLTTPAALRPHMSRTHILRCVPGPDFESIGPAIWPETFQTTNRMDRTGLELSGPWPQPQDGGQKPSAALFTGAVQLTPS
GNAFVLLPDAQTTGGYPHVLQVIRADRHLLGQIAPGDRVRFLRRSVDEAYEDLRAKTDYFAAWLPGFAF
>Mature_309_residues
MVLTVLKSGPLATLQGRAREGLRHQGIPASGPADPLSMALANRLVGNPQQATALEITFGAAEFEFHQDTVFAFAGAAAGA
SLAGAPVPAHQALEARRGDRLAFAYPSAGVRSYLAVPAGFAAENVFDSTSTFLPAAFGGFSGRALQAGDVLTGERASGPA
LDLTTPAALRPHMSRTHILRCVPGPDFESIGPAIWPETFQTTNRMDRTGLELSGPWPQPQDGGQKPSAALFTGAVQLTPS
GNAFVLLPDAQTTGGYPHVLQVIRADRHLLGQIAPGDRVRFLRRSVDEAYEDLRAKTDYFAAWLPGFAF

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=308, Percent_Identity=33.7662337662338, Blast_Score=156, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6319685, Length=303, Percent_Identity=32.3432343234323, Blast_Score=131, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 32614; Mature: 32614

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLTVLKSGPLATLQGRAREGLRHQGIPASGPADPLSMALANRLVGNPQQATALEITFGA
CEEEEECCCCCCEECCHHHHCHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECC
AEFEFHQDTVFAFAGAAAGASLAGAPVPAHQALEARRGDRLAFAYPSAGVRSYLAVPAGF
EEEEECCCCEEEEHHHHCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCC
AAENVFDSTSTFLPAAFGGFSGRALQAGDVLTGERASGPALDLTTPAALRPHMSRTHILR
HHHHHHCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCCEEECCCCHHHCCCCCCCEEEE
CVPGPDFESIGPAIWPETFQTTNRMDRTGLELSGPWPQPQDGGQKPSAALFTGAVQLTPS
ECCCCCHHHCCCCCCCHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCC
GNAFVLLPDAQTTGGYPHVLQVIRADRHLLGQIAPGDRVRFLRRSVDEAYEDLRAKTDYF
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AAWLPGFAF
HHHCCCCCC
>Mature Secondary Structure
MVLTVLKSGPLATLQGRAREGLRHQGIPASGPADPLSMALANRLVGNPQQATALEITFGA
CEEEEECCCCCCEECCHHHHCHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECC
AEFEFHQDTVFAFAGAAAGASLAGAPVPAHQALEARRGDRLAFAYPSAGVRSYLAVPAGF
EEEEECCCCEEEEHHHHCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCC
AAENVFDSTSTFLPAAFGGFSGRALQAGDVLTGERASGPALDLTTPAALRPHMSRTHILR
HHHHHHCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCCEEECCCCHHHCCCCCCCEEEE
CVPGPDFESIGPAIWPETFQTTNRMDRTGLELSGPWPQPQDGGQKPSAALFTGAVQLTPS
ECCCCCHHHCCCCCCCHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCC
GNAFVLLPDAQTTGGYPHVLQVIRADRHLLGQIAPGDRVRFLRRSVDEAYEDLRAKTDYF
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AAWLPGFAF
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]