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The map label for this gene is ybgJ [C]

Identifier: 114800075

GI number: 114800075

Start: 2207246

End: 2207875

Strand: Reverse

Name: ybgJ [C]

Synonym: HNE_2124

Alternate gene names: 114800075

Gene position: 2207875-2207246 (Counterclockwise)

Preceding gene: 114797321

Following gene: 114797991

Centisome position: 59.59

GC content: 65.24

Gene sequence:

>630_bases
ATGAGCCTGTGCGAGATTTTTCCTGTGGGGGATGATGCAATCGCGGTGAAGGCGGCCGATCGCGCCGCGCGTCATGCGCT
GGCGGCAACCCTTCGCGCGTCCGGAAGATGGCGCGACGTGGTGCCCGGAAAAGGAGAGGTGACCGTCCAGTTTGATCCGA
TCGCCCTTCCGCCCGCAGAGGCGCGTGCCCTCCTGACGCAGCAGGCGCAGGAAGATCAGCAGACAGAAAAAACGCCCGCG
CGCTGCATCCGGCTTCGCATGCGGGTGGACGCAGCTTCAGCGCCTGATCTTGAGCGCGTTGCTGCCGAAAACGCCCTGAC
ACCGGAGGCATTTCTGACACGCATCTGCGCGTCTCCGTTACTGGTTGACATGATGGGCTTCACGGCGGGCTTTGCCTATG
TCGCGGGCGTTGACGGCGCGCTGACAGCGTCTCGCCTGCCGGCGCCGCGCCAGAGGGTGCCAGCCGGTTCGGTCGGCATG
CTTACGGGGCAGTTGGGCCTTTACGCGCTGGCCGGCCCCGCGGGCTGGCCAATCATCGGCGCTATCACCGAGCCGCTGTT
TGACATACGCCGGGATGCGCCGTTCACACTGGAGGCGGGCATGCAGATCAAACTGGCGATCGAGCGATAA

Upstream 100 bases:

>100_bases
GTGTTCAAACAATCTGCCTGCATGGCGATACACCCGGCGCGGCCCGGAGCGCGGCGCTCCTGCGGGCCGCGCTGGAGCAG
CAAGGAATTACCATCCACCC

Downstream 100 bases:

>100_bases
GGCGATGGTGCTGACCGTTCTCAAGTCCGGGCCGCTTGCGACATTACAGGGCCGCGCGCGTGAGGGGCTGCGCCATCAGG
GCATTCCGGCCAGCGGCCCC

Product: allophanate hydrolase subunit 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MSLCEIFPVGDDAIAVKAADRAARHALAATLRASGRWRDVVPGKGEVTVQFDPIALPPAEARALLTQQAQEDQQTEKTPA
RCIRLRMRVDAASAPDLERVAAENALTPEAFLTRICASPLLVDMMGFTAGFAYVAGVDGALTASRLPAPRQRVPAGSVGM
LTGQLGLYALAGPAGWPIIGAITEPLFDIRRDAPFTLEAGMQIKLAIER

Sequences:

>Translated_209_residues
MSLCEIFPVGDDAIAVKAADRAARHALAATLRASGRWRDVVPGKGEVTVQFDPIALPPAEARALLTQQAQEDQQTEKTPA
RCIRLRMRVDAASAPDLERVAAENALTPEAFLTRICASPLLVDMMGFTAGFAYVAGVDGALTASRLPAPRQRVPAGSVGM
LTGQLGLYALAGPAGWPIIGAITEPLFDIRRDAPFTLEAGMQIKLAIER
>Mature_208_residues
SLCEIFPVGDDAIAVKAADRAARHALAATLRASGRWRDVVPGKGEVTVQFDPIALPPAEARALLTQQAQEDQQTEKTPAR
CIRLRMRVDAASAPDLERVAAENALTPEAFLTRICASPLLVDMMGFTAGFAYVAGVDGALTASRLPAPRQRVPAGSVGML
TGQLGLYALAGPAGWPIIGAITEPLFDIRRDAPFTLEAGMQIKLAIER

Specific function: Unknown

COG id: COG2049

COG function: function code E; Allophanate hydrolase subunit 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786929, Length=172, Percent_Identity=31.3953488372093, Blast_Score=79, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003833
- InterPro:   IPR020899
- InterPro:   IPR010016
- InterPro:   IPR002130 [H]

Pfam domain/function: PF02682 AHS1 [H]

EC number: NA

Molecular weight: Translated: 22187; Mature: 22056

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLCEIFPVGDDAIAVKAADRAARHALAATLRASGRWRDVVPGKGEVTVQFDPIALPPAE
CCCCEEEECCCCEEEEEHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEECCCCCCHHH
ARALLTQQAQEDQQTEKTPARCIRLRMRVDAASAPDLERVAAENALTPEAFLTRICASPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHH
LVDMMGFTAGFAYVAGVDGALTASRLPAPRQRVPAGSVGMLTGQLGLYALAGPAGWPIIG
HHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHCCCCCCEEEECCCCEEEEECCCCCCCHH
AITEPLFDIRRDAPFTLEAGMQIKLAIER
HHHHHHHHHHCCCCEEEECCCEEEEEEEC
>Mature Secondary Structure 
SLCEIFPVGDDAIAVKAADRAARHALAATLRASGRWRDVVPGKGEVTVQFDPIALPPAE
CCCEEEECCCCEEEEEHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEECCCCCCHHH
ARALLTQQAQEDQQTEKTPARCIRLRMRVDAASAPDLERVAAENALTPEAFLTRICASPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHH
LVDMMGFTAGFAYVAGVDGALTASRLPAPRQRVPAGSVGMLTGQLGLYALAGPAGWPIIG
HHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHCCCCCCEEEECCCCEEEEECCCCCCCHH
AITEPLFDIRRDAPFTLEAGMQIKLAIER
HHHHHHHHHHCCCCEEEECCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]