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The map label for this gene is ydiI [H]

Identifier: 114797891

GI number: 114797891

Start: 3225965

End: 3226513

Strand: Direct

Name: ydiI [H]

Synonym: HNE_3054

Alternate gene names: 114797891

Gene position: 3225965-3226513 (Clockwise)

Preceding gene: 114800311

Following gene: 114799479

Centisome position: 87.07

GC content: 61.93

Gene sequence:

>549_bases
ATGCCGAAAGGGCGGCACTTTGAACTGTTCTCGTTCAGCTGCAGGCATTGCCGCGCGGGCTCTTGCGGCCGTCTGCGCCG
CCGCTTATCGCTGCTGAAGAAGACGGAGTGGGTGATGACATATATGCTGCCCGATTCAGAGCTGACCCCAGAGGCGTTTA
ACCGCCGGAGCGAAGGCGCGCTTCCCGGCCATATCGGGCTGGTGGTCACCCATACCGGACGTGATCGCTTTGAAGGCCAT
TTCGATATTCAGCGCCACCATCACGCGCCCAACGGTTTCCTGCACGCAGGCAGCCTGGTGACACTTGCCGATACACTTTG
CGGCTACGCAACGGTCGCAAACCTGCGCGAAGGCGCAACGGGGTTCACGACCATCGAACTCAAGACAAACTTCTTCGCCA
CGGCGCTGGAAGGCCGCGTCAATGCGGTGGCTACTCCGGTCCATGTCGGGGGCACGACACAGGTCTGGGACTGCGAACTG
ACGAACGCAGCCGGCAAGCGCATGGCGCTATTCCGCTGCTCTCAGCTGGTGCTCCGGGCGAAGGGCTAG

Upstream 100 bases:

>100_bases
GGCGCCGAGCGGCCGCTTGCGCGCGCCCTGGAAGTGATCTTGCTGTTCAATGCCGCCAGCATTGTCTGCCTGCTGATGGC
GACACGCAAATACAGGTCAG

Downstream 100 bases:

>100_bases
GTGCCCCTCGCCGCAGAACAGTTGGATCAGTATTGCAGGGTGTTGGGCTCGGTCTCCGGTGGAGGCTCGGCCGCCGGCGG
CGGAACGGGCTCAGGCATCT

Product: thioesterase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MPKGRHFELFSFSCRHCRAGSCGRLRRRLSLLKKTEWVMTYMLPDSELTPEAFNRRSEGALPGHIGLVVTHTGRDRFEGH
FDIQRHHHAPNGFLHAGSLVTLADTLCGYATVANLREGATGFTTIELKTNFFATALEGRVNAVATPVHVGGTTQVWDCEL
TNAAGKRMALFRCSQLVLRAKG

Sequences:

>Translated_182_residues
MPKGRHFELFSFSCRHCRAGSCGRLRRRLSLLKKTEWVMTYMLPDSELTPEAFNRRSEGALPGHIGLVVTHTGRDRFEGH
FDIQRHHHAPNGFLHAGSLVTLADTLCGYATVANLREGATGFTTIELKTNFFATALEGRVNAVATPVHVGGTTQVWDCEL
TNAAGKRMALFRCSQLVLRAKG
>Mature_181_residues
PKGRHFELFSFSCRHCRAGSCGRLRRRLSLLKKTEWVMTYMLPDSELTPEAFNRRSEGALPGHIGLVVTHTGRDRFEGHF
DIQRHHHAPNGFLHAGSLVTLADTLCGYATVANLREGATGFTTIELKTNFFATALEGRVNAVATPVHVGGTTQVWDCELT
NAAGKRMALFRCSQLVLRAKG

Specific function: Displays esterase activity toward palmitoyl-CoA and pNP- butyrate [H]

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioesterase PaaI family [H]

Homologues:

Organism=Escherichia coli, GI1787976, Length=125, Percent_Identity=31.2, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1786813, Length=137, Percent_Identity=30.6569343065693, Blast_Score=67, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003736
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 20137; Mature: 20006

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKGRHFELFSFSCRHCRAGSCGRLRRRLSLLKKTEWVMTYMLPDSELTPEAFNRRSEGA
CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHCCCCCCC
LPGHIGLVVTHTGRDRFEGHFDIQRHHHAPNGFLHAGSLVTLADTLCGYATVANLREGAT
CCCEEEEEEEECCCCCCCCEEEEHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCC
GFTTIELKTNFFATALEGRVNAVATPVHVGGTTQVWDCELTNAAGKRMALFRCSQLVLRA
CEEEEEEECCEEEEHHCCCCCEEECEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHCC
KG
CC
>Mature Secondary Structure 
PKGRHFELFSFSCRHCRAGSCGRLRRRLSLLKKTEWVMTYMLPDSELTPEAFNRRSEGA
CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHCCCCCCC
LPGHIGLVVTHTGRDRFEGHFDIQRHHHAPNGFLHAGSLVTLADTLCGYATVANLREGAT
CCCEEEEEEEECCCCCCCCEEEEHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCC
GFTTIELKTNFFATALEGRVNAVATPVHVGGTTQVWDCELTNAAGKRMALFRCSQLVLRA
CEEEEEEECCEEEEHHCCCCCEEECEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHCC
KG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]