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The map label for this gene is yjcL [H]

Identifier: 114797864

GI number: 114797864

Start: 1643816

End: 1644952

Strand: Reverse

Name: yjcL [H]

Synonym: HNE_1609

Alternate gene names: 114797864

Gene position: 1644952-1643816 (Counterclockwise)

Preceding gene: 114798174

Following gene: 114799769

Centisome position: 44.4

GC content: 58.49

Gene sequence:

>1137_bases
TTGATATCACCGGACAATGTATTCGGACTTCTGGCTGTTTTCCTGGTCCTGTCAGCCATAGCGGTGGCCCTGGAGAAAAC
ACCGGTCGGCCGGCGTGTTTCCGGGGTCGGCCTGCTGCTGATCGGTTCCATTCTTGCGGCAAATCTCGGCCTTATTCCGC
GTAGCGCGCCTGTCTATGGCGCGATCTGGACCTATCTTGTCCCCATCGCGATCGCCCTCTTCCTGCTGAAAGCAGACCTT
CTGAAGATCTTCCGGGAAGGCGGACGGGTTCTCCTCGCCTTTTCCCTTGGAACCCTGGGCGTTGCAGCAGGCGCACTTCT
CGGCGGCAGCCTCCTGGATCTTGGTCCGGGCGGGCCTGAGATCGCGGCCGTGTTCAGCGCGACCTATGTGGGCGGTTCGC
TGAATTTCGTCGCCGTGGCAGAGGCAATTGGCTTCACCGACAATTCCCGCCTGGCCGCGGCCCTGGCGATAGATAATATT
CTCGGGGTCAGCTTCATCATGGCCATGAACCTGCTCGCGGCCTGGCCCGCGCTTCATCGCGCCTATCCGTGGAGAAGCAG
CACAATTTTTGAAGGGCCCGATGACACTCAGGCACCTGAACTTTCAGCGATCAGTCTTCAGAGCATCCTGACGTCCCTTG
CCATCGCCGCCACCATTGTCGCGGTCAGTATGGCGCTTGCCGACCGGCTTGGTATCACTAGCTACGCCCTGTTGCTTGTG
ACAACTTTTACCGCCCTGATCGCCACATTCGGTCGCCGCCAGCTTTCCCGTCTTCAGGGCGAAGACCTGGTGGCGATGGT
CTTCATGTATATGTTTTTTGCGATTATCGGCGCGGGAACCGATCTGAAGGGTGTGCTTGATGCCGCGCCAGAATACTTCC
TGCTCGTCGCAATGATATTCGCGGGCAATCTGCTGGTCACGTTCATCGCCGGATGGTTCCTCAAGCTCAACTATGCCGAA
CTGATCGTTGCCTGCATCGCCTGTATCGCCGGCCCTCCCGTTGCCGCTGCGATCGCCATAATGATGAAATGGCGCAATCT
GGTCGTTCCTGGAATTCTGACGGGCGTGCTGGGATACATCATCGGAAATTTTACCGGCATCGCCGTCTTTCGCCTGCTCG
GTGGTACGCTGCCATGA

Upstream 100 bases:

>100_bases
TTTACCGCAAGGGTATGGTTGGACCGCCTGCGCCGGAGTTCTGGGGCGGCCCGCTCGCGCCCAGGCGCCTTGCCGCCAGC
CACCCGCCGGAGACGACACA

Downstream 100 bases:

>100_bases
GCCATTGCCCACCTGTTCAGAGAGTTGCCGTTATGACCGGTTCCAAAATCAGAAGTCTCGTTGCCGGTCTTGCGCTTGCG
ATGCTCTGGACCGCGCCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MISPDNVFGLLAVFLVLSAIAVALEKTPVGRRVSGVGLLLIGSILAANLGLIPRSAPVYGAIWTYLVPIAIALFLLKADL
LKIFREGGRVLLAFSLGTLGVAAGALLGGSLLDLGPGGPEIAAVFSATYVGGSLNFVAVAEAIGFTDNSRLAAALAIDNI
LGVSFIMAMNLLAAWPALHRAYPWRSSTIFEGPDDTQAPELSAISLQSILTSLAIAATIVAVSMALADRLGITSYALLLV
TTFTALIATFGRRQLSRLQGEDLVAMVFMYMFFAIIGAGTDLKGVLDAAPEYFLLVAMIFAGNLLVTFIAGWFLKLNYAE
LIVACIACIAGPPVAAAIAIMMKWRNLVVPGILTGVLGYIIGNFTGIAVFRLLGGTLP

Sequences:

>Translated_378_residues
MISPDNVFGLLAVFLVLSAIAVALEKTPVGRRVSGVGLLLIGSILAANLGLIPRSAPVYGAIWTYLVPIAIALFLLKADL
LKIFREGGRVLLAFSLGTLGVAAGALLGGSLLDLGPGGPEIAAVFSATYVGGSLNFVAVAEAIGFTDNSRLAAALAIDNI
LGVSFIMAMNLLAAWPALHRAYPWRSSTIFEGPDDTQAPELSAISLQSILTSLAIAATIVAVSMALADRLGITSYALLLV
TTFTALIATFGRRQLSRLQGEDLVAMVFMYMFFAIIGAGTDLKGVLDAAPEYFLLVAMIFAGNLLVTFIAGWFLKLNYAE
LIVACIACIAGPPVAAAIAIMMKWRNLVVPGILTGVLGYIIGNFTGIAVFRLLGGTLP
>Mature_378_residues
MISPDNVFGLLAVFLVLSAIAVALEKTPVGRRVSGVGLLLIGSILAANLGLIPRSAPVYGAIWTYLVPIAIALFLLKADL
LKIFREGGRVLLAFSLGTLGVAAGALLGGSLLDLGPGGPEIAAVFSATYVGGSLNFVAVAEAIGFTDNSRLAAALAIDNI
LGVSFIMAMNLLAAWPALHRAYPWRSSTIFEGPDDTQAPELSAISLQSILTSLAIAATIVAVSMALADRLGITSYALLLV
TTFTALIATFGRRQLSRLQGEDLVAMVFMYMFFAIIGAGTDLKGVLDAAPEYFLLVAMIFAGNLLVTFIAGWFLKLNYAE
LIVACIACIAGPPVAAAIAIMMKWRNLVVPGILTGVLGYIIGNFTGIAVFRLLGGTLP

Specific function: Unknown

COG id: COG5505

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008537 [H]

Pfam domain/function: PF05684 DUF819 [H]

EC number: NA

Molecular weight: Translated: 39433; Mature: 39433

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISPDNVFGLLAVFLVLSAIAVALEKTPVGRRVSGVGLLLIGSILAANLGLIPRSAPVYG
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH
AIWTYLVPIAIALFLLKADLLKIFREGGRVLLAFSLGTLGVAAGALLGGSLLDLGPGGPE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHCCCHHCCCCCCHH
IAAVFSATYVGGSLNFVAVAEAIGFTDNSRLAAALAIDNILGVSFIMAMNLLAAWPALHR
HHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYPWRSSTIFEGPDDTQAPELSAISLQSILTSLAIAATIVAVSMALADRLGITSYALLLV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTFTALIATFGRRQLSRLQGEDLVAMVFMYMFFAIIGAGTDLKGVLDAAPEYFLLVAMIF
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHH
AGNLLVTFIAGWFLKLNYAELIVACIACIAGPPVAAAIAIMMKWRNLVVPGILTGVLGYI
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGNFTGIAVFRLLGGTLP
HHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MISPDNVFGLLAVFLVLSAIAVALEKTPVGRRVSGVGLLLIGSILAANLGLIPRSAPVYG
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH
AIWTYLVPIAIALFLLKADLLKIFREGGRVLLAFSLGTLGVAAGALLGGSLLDLGPGGPE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHCCCHHCCCCCCHH
IAAVFSATYVGGSLNFVAVAEAIGFTDNSRLAAALAIDNILGVSFIMAMNLLAAWPALHR
HHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYPWRSSTIFEGPDDTQAPELSAISLQSILTSLAIAATIVAVSMALADRLGITSYALLLV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTFTALIATFGRRQLSRLQGEDLVAMVFMYMFFAIIGAGTDLKGVLDAAPEYFLLVAMIF
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHH
AGNLLVTFIAGWFLKLNYAELIVACIACIAGPPVAAAIAIMMKWRNLVVPGILTGVLGYI
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGNFTGIAVFRLLGGTLP
HHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]