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The map label for this gene is yigE [H]

Identifier: 114797851

GI number: 114797851

Start: 3486211

End: 3486960

Strand: Direct

Name: yigE [H]

Synonym: HNE_3333

Alternate gene names: 114797851

Gene position: 3486211-3486960 (Clockwise)

Preceding gene: 114797352

Following gene: 114798596

Centisome position: 94.09

GC content: 62.27

Gene sequence:

>750_bases
ATGCGCCTCAGCCTTCTTCTCCTTGCCCTCTGCGGCGCGATCCTCTCGGCCTGCAACGAGGTTGAGGAAGGCCCCTGCCA
GACGCGCAGTTTCGAAAACCTGCCCTATCTCGTCTGCAGTTTCGACGCCTCACAGGATACCATCCGGCTGTTCCTGCGCG
ACGAAACCGGTGTCCCGTTCGGTCAGTTCGACCGGCTGGCCAATCATGTCGCGTCCAAGGGCGGCAACCTGGTCTTCGCA
ATGAATGCCGGGATGTACCATGACGACCGCCGCCCGGTCGGCCTGTATATTGAGGAAGGCGAGGCAGAGATGAACTTGGT
TCGCTCCCCTGGCCCCGGCAATTTCGGCATGCTGCCCAACGGGGTCTTCTGGATCGATGCGGGCAAGGCCGGTGTATCTG
AAACCCTCGCCTTCGATGAGCGCTTCAAGGAAACCCCGCCCCGCTTTGCCACCCAATCTGGCCCGATGCTGGTGATCGAT
GGCGCGCTTCACCCGGCGCTCAACCCCGACGGCACCAGCCTGCGCCGGCGCAATGGCGTCGGCGTGAGCGAAGACGGCCG
CCAGGTTTATTTCGTCATCAGCGATGTGCCGGTAAACTTCCATTCCTTCGCCCGCCTTTTCCGCGACGAGTTGGGCACGC
CCAATGCGCTCTATCTCGATGGCGCCGTTTCCAAAGCCTATGTTCCGGCGCTGGAGCGCAGCGAAACAGGCCTGGATATG
GGCCCAATCGTCGGCGTCATCCGCGAATGA

Upstream 100 bases:

>100_bases
AGGCTAGCAGGATCGGGTAAAAGAACCGCTTCACGATTGGCCATAGCCAGCTGCATATGGCGCAGTTGCGAAATCCGGGG
CGATGACTAACCTGTAAACC

Downstream 100 bases:

>100_bases
AGAAGCTCGCCCTCACTCCGGAGCGCCGCCAGAGCCTGGTCGACGAATTGCGCAGGATGTCGGCGCGCGATTTCGATATG
CCGCTGAGCGAGTTTCAGGC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MRLSLLLLALCGAILSACNEVEEGPCQTRSFENLPYLVCSFDASQDTIRLFLRDETGVPFGQFDRLANHVASKGGNLVFA
MNAGMYHDDRRPVGLYIEEGEAEMNLVRSPGPGNFGMLPNGVFWIDAGKAGVSETLAFDERFKETPPRFATQSGPMLVID
GALHPALNPDGTSLRRRNGVGVSEDGRQVYFVISDVPVNFHSFARLFRDELGTPNALYLDGAVSKAYVPALERSETGLDM
GPIVGVIRE

Sequences:

>Translated_249_residues
MRLSLLLLALCGAILSACNEVEEGPCQTRSFENLPYLVCSFDASQDTIRLFLRDETGVPFGQFDRLANHVASKGGNLVFA
MNAGMYHDDRRPVGLYIEEGEAEMNLVRSPGPGNFGMLPNGVFWIDAGKAGVSETLAFDERFKETPPRFATQSGPMLVID
GALHPALNPDGTSLRRRNGVGVSEDGRQVYFVISDVPVNFHSFARLFRDELGTPNALYLDGAVSKAYVPALERSETGLDM
GPIVGVIRE
>Mature_249_residues
MRLSLLLLALCGAILSACNEVEEGPCQTRSFENLPYLVCSFDASQDTIRLFLRDETGVPFGQFDRLANHVASKGGNLVFA
MNAGMYHDDRRPVGLYIEEGEAEMNLVRSPGPGNFGMLPNGVFWIDAGKAGVSETLAFDERFKETPPRFATQSGPMLVID
GALHPALNPDGTSLRRRNGVGVSEDGRQVYFVISDVPVNFHSFARLFRDELGTPNALYLDGAVSKAYVPALERSETGLDM
GPIVGVIRE

Specific function: Unknown

COG id: COG3698

COG function: function code S; Predicted periplasmic protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994975, Length=189, Percent_Identity=34.3915343915344, Blast_Score=118, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018711 [H]

Pfam domain/function: PF09992 DUF2233 [H]

EC number: NA

Molecular weight: Translated: 27144; Mature: 27144

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSLLLLALCGAILSACNEVEEGPCQTRSFENLPYLVCSFDASQDTIRLFLRDETGVPF
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCH
GQFDRLANHVASKGGNLVFAMNAGMYHDDRRPVGLYIEEGEAEMNLVRSPGPGNFGMLPN
HHHHHHHHHHHHCCCCEEEEEECCCEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCCC
GVFWIDAGKAGVSETLAFDERFKETPPRFATQSGPMLVIDGALHPALNPDGTSLRRRNGV
CEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHCCC
GVSEDGRQVYFVISDVPVNFHSFARLFRDELGTPNALYLDGAVSKAYVPALERSETGLDM
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHCCHHCCCCCCCC
GPIVGVIRE
CHHHHEECC
>Mature Secondary Structure
MRLSLLLLALCGAILSACNEVEEGPCQTRSFENLPYLVCSFDASQDTIRLFLRDETGVPF
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCH
GQFDRLANHVASKGGNLVFAMNAGMYHDDRRPVGLYIEEGEAEMNLVRSPGPGNFGMLPN
HHHHHHHHHHHHCCCCEEEEEECCCEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCCC
GVFWIDAGKAGVSETLAFDERFKETPPRFATQSGPMLVIDGALHPALNPDGTSLRRRNGV
CEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHCCC
GVSEDGRQVYFVISDVPVNFHSFARLFRDELGTPNALYLDGAVSKAYVPALERSETGLDM
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHCCHHCCCCCCCC
GPIVGVIRE
CHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1379743; 9278503 [H]