Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114797798

Identifier: 114797798

GI number: 114797798

Start: 872394

End: 873809

Strand: Direct

Name: 114797798

Synonym: HNE_0853

Alternate gene names: NA

Gene position: 872394-873809 (Clockwise)

Preceding gene: 114800347

Following gene: 114799853

Centisome position: 23.55

GC content: 65.32

Gene sequence:

>1416_bases
ATGTTGAAACTCCGGCTTATCTCCGGCGCCGCTGCGGCCGTATTCCTCGCCGCCTGCGCCACGCCCGCCCCCCCACCTGA
AGCTGCGCCTGAAGCCTCGCTCGACGCGGAGGCGGAAACGCCCGCCGCCCTGGCGCTGGATGTCAGCGTCTATGACGGCG
ATTTCGTCGACATCCAGGAATTCACCACGCCGGGCGGGGTGTCCGTCTGGCTGGTCAGCGAGCCCTCAATCCCCATCGTC
TCGGTACAGATGGCCTGGCGCGGCGGATCGGTGGCCGACCCCGAAGGCCTGGAAGGGCTCGGCCAGGCGGTCGTCTATGG
CATGAATGAAGGCGCGGGCGATCTCGATTCGCTCGGCTTCCAGACGGCGATGGAAGACCTGAACATGAGCTTTGGCTGTT
CCAATGGCAGCGAATGGACCAGCTGCTCGGCCACCATGCTGTCGGATAATGCCGCCGCCTCGATGGCGCTGGTCGCCAGC
GCGCTTACCGCGCCGCGCTATGACCCCGGCCCGTTCGAGCGTTTCGTGCGCGAACAGGAAGTCAGCCTCAAGACGCGGGA
AACCTCGGCCGGCTATCTCGCCTGGCGGGCCCAGTCCCAGGCGCTCTATCCGGATCATCCCTTCGCCCGCGAAGTCTCGG
CGCAAAGCCTTGCCGCGCTGACGCCGGAACTCGCCCGCGCGCATAAAGACGCGCTGATGACGAAGGACCGCCTGCTGGTC
ACCGCAGTGGGCGCCATCTCGCCCGAAGACCTTGCACCGCTGATCGACGCCGCCATCGCGGACCTGCCGGAGACGAGCGA
TGTCCCCGCCGCAACGCCGGTCACGCTGCCGGAGATTGCTGCGGCAGAGCCGGTCGTCGTCCCGCTGCCCCAGCCCCAGA
GTCTCGTGCGCTTCATCGGCCCGGCCATGGACCGGTCGAACCCGGATTTCTTCCCGGCCTTTGTGCTCAATTACACCTTC
GGCGGCGGCGGCTTTGAAAGCCGCCTCGTGAAAACCCTGCGGGTCGACAAGGGCCTGACCTATGGCATCAGCTCCAGCAT
TGATCCCGACCCGAACTTCAACGTCTGGTCCGGCGGGGGCCAGACCAAGAATGAAAGCGCCGGTGAATTCATCACCGGCA
TCCGCGACGAGATGCAGAAGTTCATCGAAGGCGGCGTGACGGAGGCAGAGCTTTCCGACGCCAAGGCCTATCTGATCGGC
TCCTATCCGCTCGGCTTTGACTCCAACGCCAAGATCGCGGGCAACATCATGTCCGTCCGCCAGGACGAACTCGGCATCGA
CTATTTCGACCGCCGCAACGCCCTGATCGACGCCGTCACCCTGGAAGACGTAAACGCGGCGGCCGCAAAATACCTCGCCC
CGGACCGGTTCAGCTTCTTCGTCGTCGGCGAACCCGAAGGCCTAAGCGCAGAGTAA

Upstream 100 bases:

>100_bases
CGGTCACGCCGGACGAAGCGCTCGCCGCCGTGCGCGCCGTCTTTGGCGCCGACCAGAACTATATCACTTCCCATCTTCTG
CCGGCCGAAGGAGACCTCTG

Downstream 100 bases:

>100_bases
TCCCCTCAACGCCTCTCCCGCTCGCGGGAGAGGCTGCGCAGGATCAGCGTTTGCAGTGCAAACGCCCGGAGCAGGCCGTT
GCGCAGCAATGGGAGGTGAG

Product: M16 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MLKLRLISGAAAAVFLAACATPAPPPEAAPEASLDAEAETPAALALDVSVYDGDFVDIQEFTTPGGVSVWLVSEPSIPIV
SVQMAWRGGSVADPEGLEGLGQAVVYGMNEGAGDLDSLGFQTAMEDLNMSFGCSNGSEWTSCSATMLSDNAAASMALVAS
ALTAPRYDPGPFERFVREQEVSLKTRETSAGYLAWRAQSQALYPDHPFAREVSAQSLAALTPELARAHKDALMTKDRLLV
TAVGAISPEDLAPLIDAAIADLPETSDVPAATPVTLPEIAAAEPVVVPLPQPQSLVRFIGPAMDRSNPDFFPAFVLNYTF
GGGGFESRLVKTLRVDKGLTYGISSSIDPDPNFNVWSGGGQTKNESAGEFITGIRDEMQKFIEGGVTEAELSDAKAYLIG
SYPLGFDSNAKIAGNIMSVRQDELGIDYFDRRNALIDAVTLEDVNAAAAKYLAPDRFSFFVVGEPEGLSAE

Sequences:

>Translated_471_residues
MLKLRLISGAAAAVFLAACATPAPPPEAAPEASLDAEAETPAALALDVSVYDGDFVDIQEFTTPGGVSVWLVSEPSIPIV
SVQMAWRGGSVADPEGLEGLGQAVVYGMNEGAGDLDSLGFQTAMEDLNMSFGCSNGSEWTSCSATMLSDNAAASMALVAS
ALTAPRYDPGPFERFVREQEVSLKTRETSAGYLAWRAQSQALYPDHPFAREVSAQSLAALTPELARAHKDALMTKDRLLV
TAVGAISPEDLAPLIDAAIADLPETSDVPAATPVTLPEIAAAEPVVVPLPQPQSLVRFIGPAMDRSNPDFFPAFVLNYTF
GGGGFESRLVKTLRVDKGLTYGISSSIDPDPNFNVWSGGGQTKNESAGEFITGIRDEMQKFIEGGVTEAELSDAKAYLIG
SYPLGFDSNAKIAGNIMSVRQDELGIDYFDRRNALIDAVTLEDVNAAAAKYLAPDRFSFFVVGEPEGLSAE
>Mature_471_residues
MLKLRLISGAAAAVFLAACATPAPPPEAAPEASLDAEAETPAALALDVSVYDGDFVDIQEFTTPGGVSVWLVSEPSIPIV
SVQMAWRGGSVADPEGLEGLGQAVVYGMNEGAGDLDSLGFQTAMEDLNMSFGCSNGSEWTSCSATMLSDNAAASMALVAS
ALTAPRYDPGPFERFVREQEVSLKTRETSAGYLAWRAQSQALYPDHPFAREVSAQSLAALTPELARAHKDALMTKDRLLV
TAVGAISPEDLAPLIDAAIADLPETSDVPAATPVTLPEIAAAEPVVVPLPQPQSLVRFIGPAMDRSNPDFFPAFVLNYTF
GGGGFESRLVKTLRVDKGLTYGISSSIDPDPNFNVWSGGGQTKNESAGEFITGIRDEMQKFIEGGVTEAELSDAKAYLIG
SYPLGFDSNAKIAGNIMSVRQDELGIDYFDRRNALIDAVTLEDVNAAAAKYLAPDRFSFFVVGEPEGLSAE

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: NA

Molecular weight: Translated: 49732; Mature: 49732

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLRLISGAAAAVFLAACATPAPPPEAAPEASLDAEAETPAALALDVSVYDGDFVDIQE
CEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEHHH
FTTPGGVSVWLVSEPSIPIVSVQMAWRGGSVADPEGLEGLGQAVVYGMNEGAGDLDSLGF
CCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEECCCCCCCHHHHHH
QTAMEDLNMSFGCSNGSEWTSCSATMLSDNAAASMALVASALTAPRYDPGPFERFVREQE
HHHHHHCCCEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
VSLKTRETSAGYLAWRAQSQALYPDHPFAREVSAQSLAALTPELARAHKDALMTKDRLLV
HCEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEE
TAVGAISPEDLAPLIDAAIADLPETSDVPAATPVTLPEIAAAEPVVVPLPQPQSLVRFIG
EEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCEEEECCCHHHHHHHHH
PAMDRSNPDFFPAFVLNYTFGGGGFESRLVKTLRVDKGLTYGISSSIDPDPNFNVWSGGG
HHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCEEECCCC
QTKNESAGEFITGIRDEMQKFIEGGVTEAELSDAKAYLIGSYPLGFDSNAKIAGNIMSVR
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCCCCCCCEEECHHHHHH
QDELGIDYFDRRNALIDAVTLEDVNAAAAKYLAPDRFSFFVVGEPEGLSAE
HHHCCCCHHHCCCCEEEEEEHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC
>Mature Secondary Structure
MLKLRLISGAAAAVFLAACATPAPPPEAAPEASLDAEAETPAALALDVSVYDGDFVDIQE
CEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEHHH
FTTPGGVSVWLVSEPSIPIVSVQMAWRGGSVADPEGLEGLGQAVVYGMNEGAGDLDSLGF
CCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEECCCCCCCHHHHHH
QTAMEDLNMSFGCSNGSEWTSCSATMLSDNAAASMALVASALTAPRYDPGPFERFVREQE
HHHHHHCCCEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
VSLKTRETSAGYLAWRAQSQALYPDHPFAREVSAQSLAALTPELARAHKDALMTKDRLLV
HCEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEE
TAVGAISPEDLAPLIDAAIADLPETSDVPAATPVTLPEIAAAEPVVVPLPQPQSLVRFIG
EEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCEEEECCCHHHHHHHHH
PAMDRSNPDFFPAFVLNYTFGGGGFESRLVKTLRVDKGLTYGISSSIDPDPNFNVWSGGG
HHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCEEECCCC
QTKNESAGEFITGIRDEMQKFIEGGVTEAELSDAKAYLIGSYPLGFDSNAKIAGNIMSVR
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCCCCCCCEEECHHHHHH
QDELGIDYFDRRNALIDAVTLEDVNAAAAKYLAPDRFSFFVVGEPEGLSAE
HHHCCCCHHHCCCCEEEEEEHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]