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The map label for this gene is fliN [H]

Identifier: 114797692

GI number: 114797692

Start: 1421640

End: 1421909

Strand: Direct

Name: fliN [H]

Synonym: HNE_1394

Alternate gene names: 114797692

Gene position: 1421640-1421909 (Clockwise)

Preceding gene: 114798466

Following gene: 114798396

Centisome position: 38.37

GC content: 61.48

Gene sequence:

>270_bases
ATGACCGAGCCGAAGAATCCCGCGCTTGAGAAGATGCTCATGGATGTACCCGTCCGCGTGGATGTTGTGCTGGGAGAGGC
GCGCATTCCGATGGAGGAGCTGATGGCGCTTTCGCCGGGCGAGATCGTTGCCCTTGAGCGCCAGACCAATGAGCCTGTGG
ATATTTACGTGTCCGGGCGCCTCGTTGCGCGGGGCAAGCTGGTGGTCACTGACGGGCAATTGGGCGTCACGCTCTCGGAA
ATCATCGATTCCCGTCCGGAAGCGGCCTGA

Upstream 100 bases:

>100_bases
CCCAGCGCCTGCTCGACGGGCAGGGCGACCTCTTTGGCCTCACAAGAGACCTCAGTGAAAAGCTGGACAACGCCCCCACA
GCCGGGCGAAGGATGGGGCA

Downstream 100 bases:

>100_bases
ATTAGTTACATCTGGAACTAATTTTATTTCGCGGTTATAATTACCCGCATGGACACTGCATTTGCCAAGAATCGCTATCA
TGGCGCCCCCCGCGCGGACG

Product: flagellar motor switch protein FliN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MTEPKNPALEKMLMDVPVRVDVVLGEARIPMEELMALSPGEIVALERQTNEPVDIYVSGRLVARGKLVVTDGQLGVTLSE
IIDSRPEAA

Sequences:

>Translated_89_residues
MTEPKNPALEKMLMDVPVRVDVVLGEARIPMEELMALSPGEIVALERQTNEPVDIYVSGRLVARGKLVVTDGQLGVTLSE
IIDSRPEAA
>Mature_88_residues
TEPKNPALEKMLMDVPVRVDVVLGEARIPMEELMALSPGEIVALERQTNEPVDIYVSGRLVARGKLVVTDGQLGVTLSEI
IDSRPEAA

Specific function: FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliN/MopA/SpaO family [H]

Homologues:

Organism=Escherichia coli, GI1788256, Length=71, Percent_Identity=40.8450704225352, Blast_Score=63, Evalue=4e-12,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012826
- InterPro:   IPR001172
- InterPro:   IPR001543 [H]

Pfam domain/function: PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 9669; Mature: 9538

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEPKNPALEKMLMDVPVRVDVVLGEARIPMEELMALSPGEIVALERQTNEPVDIYVSGR
CCCCCCHHHHHHHHCCCEEEEEEECCCCCCHHHHHCCCCCCEEEEECCCCCCEEEEECCE
LVARGKLVVTDGQLGVTLSEIIDSRPEAA
EEECCEEEEECCCCCEEHHHHHCCCCCCC
>Mature Secondary Structure 
TEPKNPALEKMLMDVPVRVDVVLGEARIPMEELMALSPGEIVALERQTNEPVDIYVSGR
CCCCCHHHHHHHHCCCEEEEEEECCCCCCHHHHHCCCCCCEEEEECCCCCCEEEEECCE
LVARGKLVVTDGQLGVTLSEIIDSRPEAA
EEECCEEEEECCCCCEEHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8002583; 11259647; 2315326; 1732219 [H]