| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is phhA [H]
Identifier: 114798396
GI number: 114798396
Start: 1421958
End: 1422839
Strand: Direct
Name: phhA [H]
Synonym: HNE_1395
Alternate gene names: 114798396
Gene position: 1421958-1422839 (Clockwise)
Preceding gene: 114797692
Following gene: 114800479
Centisome position: 38.38
GC content: 59.75
Gene sequence:
>882_bases ATGGACACTGCATTTGCCAAGAATCGCTATCATGGCGCCCCCCGCGCGGACGATTACACCATCGACCAGGCGTGGGAGAC CTATTCCCCCGCCGAGCATGACCGCTGGGACAGGCTGTTCCGCCGCCAGAAGGAGATCGCCACCGGGCGCGCTTCGAAGG TGGCGCTGGACGCAATGCACAAGCTGGAGCTTTCCCCCTCCGGCATCCCGCATATGGGCCGGCTGTCAGACAAGCTGGAA AAGATAACCGGCTGGCGCGTGGTGCCTGTGGCTGAGCTTGTGCCCGATGAGGTGTTCTTCGATCACCTCGCCAACCGCCG CTTTCCGGCAGGCGCCTTCATCCGCCCGGAGGAAGAGTTCGACTATCTTCAGGAGCCGGACATTTTCCACGACATCTTCG GCCATGTGCCGATGCTGGCAGACCCTGTGTTTGCAGACTTCATGGAAGCCTATGGCAAGGGCGGCCAGCGCGCGATGCGC CTCGGCCAGCTGCACAATCTGGCGCGCCTTTATTGGTACACGGTCGAGTTCGGCCTGATCCAGGAAGAGGACGGACTGCG CATCTATGGCGCGGGCATCCTCTCCAGCCCGCATGAAACCGTGTTCGCACTGGAAGACGCCAGCCCCAACCGTATCGGCT TTGACCTGCAACGCCTTATGCGGACGAAATACATTATTGATGATTTCCAGCAGACCTATTTCGTCATACCCAGCTTCGAG GCGTTGCTCGAAACCTGCTACAAGGATTTCGGCGATGTTTATGCCGAAGTGAAAGGCCAGCCCGACTATGAAGCCAATGA GCTTGCGCCGGGCGATGATGTGATCACCCGCGGCACGCTGAAATATTTCAGGGACGGCGGGCGTAAGGCCGGTAAGGCCT AA
Upstream 100 bases:
>100_bases ATTGGGCGTCACGCTCTCGGAAATCATCGATTCCCGTCCGGAAGCGGCCTGAATTAGTTACATCTGGAACTAATTTTATT TCGCGGTTATAATTACCCGC
Downstream 100 bases:
>100_bases GCCTCGCCCTTGCGCGCCGTCTGCTTGGGATCATGCTTGGGCGCAGGCGCCAGGCGCATCACCTCGGTCTGGAACCGCTC ATCGTCGCCCGCCAGCAGGA
Product: phenylalanine 4-monooxygenase
Products: NA
Alternate protein names: PAH; Phe-4-monooxygenase [H]
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MDTAFAKNRYHGAPRADDYTIDQAWETYSPAEHDRWDRLFRRQKEIATGRASKVALDAMHKLELSPSGIPHMGRLSDKLE KITGWRVVPVAELVPDEVFFDHLANRRFPAGAFIRPEEEFDYLQEPDIFHDIFGHVPMLADPVFADFMEAYGKGGQRAMR LGQLHNLARLYWYTVEFGLIQEEDGLRIYGAGILSSPHETVFALEDASPNRIGFDLQRLMRTKYIIDDFQQTYFVIPSFE ALLETCYKDFGDVYAEVKGQPDYEANELAPGDDVITRGTLKYFRDGGRKAGKA
Sequences:
>Translated_293_residues MDTAFAKNRYHGAPRADDYTIDQAWETYSPAEHDRWDRLFRRQKEIATGRASKVALDAMHKLELSPSGIPHMGRLSDKLE KITGWRVVPVAELVPDEVFFDHLANRRFPAGAFIRPEEEFDYLQEPDIFHDIFGHVPMLADPVFADFMEAYGKGGQRAMR LGQLHNLARLYWYTVEFGLIQEEDGLRIYGAGILSSPHETVFALEDASPNRIGFDLQRLMRTKYIIDDFQQTYFVIPSFE ALLETCYKDFGDVYAEVKGQPDYEANELAPGDDVITRGTLKYFRDGGRKAGKA >Mature_293_residues MDTAFAKNRYHGAPRADDYTIDQAWETYSPAEHDRWDRLFRRQKEIATGRASKVALDAMHKLELSPSGIPHMGRLSDKLE KITGWRVVPVAELVPDEVFFDHLANRRFPAGAFIRPEEEFDYLQEPDIFHDIFGHVPMLADPVFADFMEAYGKGGQRAMR LGQLHNLARLYWYTVEFGLIQEEDGLRIYGAGILSSPHETVFALEDASPNRIGFDLQRLMRTKYIIDDFQQTYFVIPSFE ALLETCYKDFGDVYAEVKGQPDYEANELAPGDDVITRGTLKYFRDGGRKAGKA
Specific function: Unknown
COG id: COG3186
COG function: function code E; Phenylalanine-4-hydroxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the biopterin-dependent aromatic amino acid hydroxylase family [H]
Homologues:
Organism=Homo sapiens, GI4557819, Length=216, Percent_Identity=32.8703703703704, Blast_Score=112, Evalue=4e-25, Organism=Homo sapiens, GI31795563, Length=217, Percent_Identity=34.1013824884793, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI4759248, Length=173, Percent_Identity=36.4161849710983, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI88900503, Length=216, Percent_Identity=33.3333333333333, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI88900505, Length=216, Percent_Identity=33.3333333333333, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI88900501, Length=216, Percent_Identity=33.3333333333333, Blast_Score=103, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17531391, Length=176, Percent_Identity=39.2045454545455, Blast_Score=117, Evalue=5e-27, Organism=Caenorhabditis elegans, GI115532103, Length=230, Percent_Identity=33.0434782608696, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI115533973, Length=230, Percent_Identity=33.0434782608696, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI71980736, Length=220, Percent_Identity=30.9090909090909, Blast_Score=105, Evalue=2e-23, Organism=Drosophila melanogaster, GI24660393, Length=226, Percent_Identity=33.1858407079646, Blast_Score=113, Evalue=1e-25, Organism=Drosophila melanogaster, GI62472054, Length=226, Percent_Identity=33.1858407079646, Blast_Score=113, Evalue=1e-25, Organism=Drosophila melanogaster, GI17136774, Length=217, Percent_Identity=32.7188940092166, Blast_Score=112, Evalue=3e-25, Organism=Drosophila melanogaster, GI17136776, Length=217, Percent_Identity=32.7188940092166, Blast_Score=112, Evalue=3e-25, Organism=Drosophila melanogaster, GI24654994, Length=265, Percent_Identity=30.9433962264151, Blast_Score=104, Evalue=8e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001273 - InterPro: IPR018301 - InterPro: IPR019774 - InterPro: IPR005960 [H]
Pfam domain/function: PF00351 Biopterin_H [H]
EC number: =1.14.16.1 [H]
Molecular weight: Translated: 33541; Mature: 33541
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS00367 BIOPTERIN_HYDROXYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTAFAKNRYHGAPRADDYTIDQAWETYSPAEHDRWDRLFRRQKEIATGRASKVALDAMH CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH KLELSPSGIPHMGRLSDKLEKITGWRVVPVAELVPDEVFFDHLANRRFPAGAFIRPEEEF HHCCCCCCCCCHHHHHHHHHHHCCCEEEEHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHH DYLQEPDIFHDIFGHVPMLADPVFADFMEAYGKGGQRAMRLGQLHNLARLYWYTVEFGLI HHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEECEE QEEDGLRIYGAGILSSPHETVFALEDASPNRIGFDLQRLMRTKYIIDDFQQTYFVIPSFE ECCCCCEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCHH ALLETCYKDFGDVYAEVKGQPDYEANELAPGDDVITRGTLKYFRDGGRKAGKA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MDTAFAKNRYHGAPRADDYTIDQAWETYSPAEHDRWDRLFRRQKEIATGRASKVALDAMH CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH KLELSPSGIPHMGRLSDKLEKITGWRVVPVAELVPDEVFFDHLANRRFPAGAFIRPEEEF HHCCCCCCCCCHHHHHHHHHHHCCCEEEEHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHH DYLQEPDIFHDIFGHVPMLADPVFADFMEAYGKGGQRAMRLGQLHNLARLYWYTVEFGLI HHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEECEE QEEDGLRIYGAGILSSPHETVFALEDASPNRIGFDLQRLMRTKYIIDDFQQTYFVIPSFE ECCCCCEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCHH ALLETCYKDFGDVYAEVKGQPDYEANELAPGDDVITRGTLKYFRDGGRKAGKA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11259647 [H]