| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797678
Identifier: 114797678
GI number: 114797678
Start: 1655756
End: 1657552
Strand: Reverse
Name: 114797678
Synonym: HNE_1620
Alternate gene names: NA
Gene position: 1657552-1655756 (Counterclockwise)
Preceding gene: 114799145
Following gene: 114799689
Centisome position: 44.74
GC content: 62.38
Gene sequence:
>1797_bases GTGGGCAAAGACATCCGGCTGGCCCTTCCCCTGGGTCTCGGGAAGGCAAACCGGCTGACCAATGCACTCTATGAGATGGC CAAGGCGGATGCCTCGATCCGGCTGACGATTTACACCGCGCTTTCGATTGTGCGGCCCAGGCTGCGCGCAGGCCTGGCGG CGCGGTTTGGCGGGCCGGTGGTGGAGCGGCTGTTCGGGGACTATCCTGATCTCGCGTATGCGGTGGACCGGGCGCGGGGC GCCCTACCCGCCAATGTCGTGGTGGAGGAGTTCTTTCTCGCGACGGGCACCCTGCTGGGCAACGAATACGCGCAGCGCCA CTATAGCAGCGTGAACTATACCCATGCGATGCGCCGCATCATCTCCGGCAATGTGAACGTGATCGGCCAGATGATTGCCG TACGTGATGGCCGCTACAGCCTCGCCTGCAATACCGATATCAGCCTGGACCTTATCCCCCTGATGCGGCGCAAGGTGGGG GCTGAGAACTTCATCGTCATTGGCGAGATCAATGCCCGCCTGCCGTTCATGCCCAATGATGCCGAAGTGCCGGCGGATGA ATTCGACATGCTGCTGGATGCCGGCGCCTATGACCTGGCGGGCCTGCCCGCGCCGCGTGTGGAGCCTGCCAGCCATGCGA TTGGCCTGAGGGCCGCGCGTCTGGTTAAGGATGGGGGCACGCTTCAGATCGGGATCGGCTCGCTTGGCGATGGCGCCGCG CAGTCTGTCCTTCTGCGCCATACCCGGCCGGAGGCATTCCGGGCGGCGGTGGACGCGCTTTCAGGGCCAAGCGGCCCGGT TGAGGAAGGCGGTGAGGGCCGGTTTGACGACGGCCTCTACGGATGCACGGAGATGTTCACGCAGGGCATGTTCGAACTGC TGCGGGCCGGTGTGTTCTCGCGGCGCATTCGGGACGGGCAGACTGTGACGATTGACGGGGGCTTTTATCTTGGTCCGCAG AATTTCTATCAGGACCTTCGGGACGCGCCGGACGACCTTCTCTCGCAGATCAACATGACCAGTGTAGCGGATGTAAATGC CCTCTATGGCGATGAAATGGTCCGCCGCCGGGAACGGGCTCATGCCCGGTTCATCAATATTGCGATGAAGGCGACGTGCC TGGGCGCCGTGACATCCGATGCTCTGGAGGATGGCCGCGTGGTGAGCGGGGTGGGCGGACAGTATAATTTCGTGGCGCAG GCGCACGAACTGGAAGATGCGCGCTCGATCATTCTGCTGAAGGCGGTGCGCGAGAGCGATGGCAAGGCCGAATCCAATAT CGTGTGGTCCTACGGGCATACGACGGTTCCGCGCCACCTGCGCGACATCATCATTACCGAATATGGCGTGGCAGACCTGC GCGGAAAGACCGACGAAGAATGCGTGCGCTGCATGCTGGCGATTACCGATGCGCGCTTCATTGACGGGCTGGTTCAGGAA GCGATAGCGGCCAGAAAGCTGCCCCGAGATTTTGTGGTGCCGGCAGCATGGCGGGCCAACACATCTGACGCCCTGGCGAA GACCTTGGCCCCGCACATTCTAGACCTGCCGCCCTATCCCTTCGGCAGCGAGTTGACCGGCATCGAGCAAAGACTTGCGC CCGCCCTTAGTCATCTTTCTGCGCAGACACGAACGCCCTTGATGCGCGCGCGGTATGTTCTGGGCGCCCTCCTCTCATCG CCCAGCCCCACAGACTACCAACCGCATTTGCAAAGGCTCAATCTGGAGCGGCCTGCGAATTTGACCCAATGGCTTTGGCA AAGGCTGGTGCTTCGAAGCCTTGCGCAGACTTCATGA
Upstream 100 bases:
>100_bases TACAGGGGCACGTATGGACGACATGAAACCGCCTTCCGAGGCCCCTCTGCCAGCCGTCCACATGACCGCGGAAGCGTGCG CCCGAGCGGTTGTGGAGCGG
Downstream 100 bases:
>100_bases CAGGCGAGCCGGGAGGCCTGCATTGATCGGACCGGTTGGGTGACCTTGTAAACCGGCACCTGGTTACGCGCGCCTAAAGT TTGACTTGCATCCATCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: Acetyl-CoA Hydrolase; 4-Hydroxybutyrate Co A Transferase; Acetyl-CoA Hydrolase/Transferase Family Protein; 4-Hydroxybutyrate CoA-Transferase; Acetyl-CoA Hydrolase-Like Protein; 4-Hydroxybutyrate CoA-Transferase AbfT; Co A Transferase; Acetyl-CoA Hydrolase/Transferase Family; Acetyl-Coa Hydrolase/Transferase Protein
Number of amino acids: Translated: 598; Mature: 597
Protein sequence:
>598_residues MGKDIRLALPLGLGKANRLTNALYEMAKADASIRLTIYTALSIVRPRLRAGLAARFGGPVVERLFGDYPDLAYAVDRARG ALPANVVVEEFFLATGTLLGNEYAQRHYSSVNYTHAMRRIISGNVNVIGQMIAVRDGRYSLACNTDISLDLIPLMRRKVG AENFIVIGEINARLPFMPNDAEVPADEFDMLLDAGAYDLAGLPAPRVEPASHAIGLRAARLVKDGGTLQIGIGSLGDGAA QSVLLRHTRPEAFRAAVDALSGPSGPVEEGGEGRFDDGLYGCTEMFTQGMFELLRAGVFSRRIRDGQTVTIDGGFYLGPQ NFYQDLRDAPDDLLSQINMTSVADVNALYGDEMVRRRERAHARFINIAMKATCLGAVTSDALEDGRVVSGVGGQYNFVAQ AHELEDARSIILLKAVRESDGKAESNIVWSYGHTTVPRHLRDIIITEYGVADLRGKTDEECVRCMLAITDARFIDGLVQE AIAARKLPRDFVVPAAWRANTSDALAKTLAPHILDLPPYPFGSELTGIEQRLAPALSHLSAQTRTPLMRARYVLGALLSS PSPTDYQPHLQRLNLERPANLTQWLWQRLVLRSLAQTS
Sequences:
>Translated_598_residues MGKDIRLALPLGLGKANRLTNALYEMAKADASIRLTIYTALSIVRPRLRAGLAARFGGPVVERLFGDYPDLAYAVDRARG ALPANVVVEEFFLATGTLLGNEYAQRHYSSVNYTHAMRRIISGNVNVIGQMIAVRDGRYSLACNTDISLDLIPLMRRKVG AENFIVIGEINARLPFMPNDAEVPADEFDMLLDAGAYDLAGLPAPRVEPASHAIGLRAARLVKDGGTLQIGIGSLGDGAA QSVLLRHTRPEAFRAAVDALSGPSGPVEEGGEGRFDDGLYGCTEMFTQGMFELLRAGVFSRRIRDGQTVTIDGGFYLGPQ NFYQDLRDAPDDLLSQINMTSVADVNALYGDEMVRRRERAHARFINIAMKATCLGAVTSDALEDGRVVSGVGGQYNFVAQ AHELEDARSIILLKAVRESDGKAESNIVWSYGHTTVPRHLRDIIITEYGVADLRGKTDEECVRCMLAITDARFIDGLVQE AIAARKLPRDFVVPAAWRANTSDALAKTLAPHILDLPPYPFGSELTGIEQRLAPALSHLSAQTRTPLMRARYVLGALLSS PSPTDYQPHLQRLNLERPANLTQWLWQRLVLRSLAQTS >Mature_597_residues GKDIRLALPLGLGKANRLTNALYEMAKADASIRLTIYTALSIVRPRLRAGLAARFGGPVVERLFGDYPDLAYAVDRARGA LPANVVVEEFFLATGTLLGNEYAQRHYSSVNYTHAMRRIISGNVNVIGQMIAVRDGRYSLACNTDISLDLIPLMRRKVGA ENFIVIGEINARLPFMPNDAEVPADEFDMLLDAGAYDLAGLPAPRVEPASHAIGLRAARLVKDGGTLQIGIGSLGDGAAQ SVLLRHTRPEAFRAAVDALSGPSGPVEEGGEGRFDDGLYGCTEMFTQGMFELLRAGVFSRRIRDGQTVTIDGGFYLGPQN FYQDLRDAPDDLLSQINMTSVADVNALYGDEMVRRRERAHARFINIAMKATCLGAVTSDALEDGRVVSGVGGQYNFVAQA HELEDARSIILLKAVRESDGKAESNIVWSYGHTTVPRHLRDIIITEYGVADLRGKTDEECVRCMLAITDARFIDGLVQEA IAARKLPRDFVVPAAWRANTSDALAKTLAPHILDLPPYPFGSELTGIEQRLAPALSHLSAQTRTPLMRARYVLGALLSSP SPTDYQPHLQRLNLERPANLTQWLWQRLVLRSLAQTS
Specific function: Unknown
COG id: COG0427
COG function: function code C; Acetyl-CoA hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI32563853, Length=304, Percent_Identity=26.9736842105263, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI21358615, Length=350, Percent_Identity=26.5714285714286, Blast_Score=87, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65338; Mature: 65206
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKDIRLALPLGLGKANRLTNALYEMAKADASIRLTIYTALSIVRPRLRAGLAARFGGPV CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHH VERLFGDYPDLAYAVDRARGALPANVVVEEFFLATGTLLGNEYAQRHYSSVNYTHAMRRI HHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH ISGNVNVIGQMIAVRDGRYSLACNTDISLDLIPLMRRKVGAENFIVIGEINARLPFMPND HCCCHHHHHHHHEEECCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC AEVPADEFDMLLDAGAYDLAGLPAPRVEPASHAIGLRAARLVKDGGTLQIGIGSLGDGAA CCCCHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHH QSVLLRHTRPEAFRAAVDALSGPSGPVEEGGEGRFDDGLYGCTEMFTQGMFELLRAGVFS HHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RRIRDGQTVTIDGGFYLGPQNFYQDLRDAPDDLLSQINMTSVADVNALYGDEMVRRRERA HHHCCCCEEEECCCEEECHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH HARFINIAMKATCLGAVTSDALEDGRVVSGVGGQYNFVAQAHELEDARSIILLKAVRESD HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCC GKAESNIVWSYGHTTVPRHLRDIIITEYGVADLRGKTDEECVRCMLAITDARFIDGLVQE CCCCCCEEEECCCCCHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH AIAARKLPRDFVVPAAWRANTSDALAKTLAPHILDLPPYPFGSELTGIEQRLAPALSHLS HHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH AQTRTPLMRARYVLGALLSSPSPTDYQPHLQRLNLERPANLTQWLWQRLVLRSLAQTS HHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GKDIRLALPLGLGKANRLTNALYEMAKADASIRLTIYTALSIVRPRLRAGLAARFGGPV CCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHH VERLFGDYPDLAYAVDRARGALPANVVVEEFFLATGTLLGNEYAQRHYSSVNYTHAMRRI HHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH ISGNVNVIGQMIAVRDGRYSLACNTDISLDLIPLMRRKVGAENFIVIGEINARLPFMPND HCCCHHHHHHHHEEECCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC AEVPADEFDMLLDAGAYDLAGLPAPRVEPASHAIGLRAARLVKDGGTLQIGIGSLGDGAA CCCCHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHH QSVLLRHTRPEAFRAAVDALSGPSGPVEEGGEGRFDDGLYGCTEMFTQGMFELLRAGVFS HHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RRIRDGQTVTIDGGFYLGPQNFYQDLRDAPDDLLSQINMTSVADVNALYGDEMVRRRERA HHHCCCCEEEECCCEEECHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH HARFINIAMKATCLGAVTSDALEDGRVVSGVGGQYNFVAQAHELEDARSIILLKAVRESD HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCC GKAESNIVWSYGHTTVPRHLRDIIITEYGVADLRGKTDEECVRCMLAITDARFIDGLVQE CCCCCCEEEECCCCCHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH AIAARKLPRDFVVPAAWRANTSDALAKTLAPHILDLPPYPFGSELTGIEQRLAPALSHLS HHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH AQTRTPLMRARYVLGALLSSPSPTDYQPHLQRLNLERPANLTQWLWQRLVLRSLAQTS HHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA