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The map label for this gene is traG [H]

Identifier: 114799145

GI number: 114799145

Start: 1658917

End: 1660458

Strand: Reverse

Name: traG [H]

Synonym: HNE_1622

Alternate gene names: 114799145

Gene position: 1660458-1658917 (Counterclockwise)

Preceding gene: 114798231

Following gene: 114797678

Centisome position: 44.82

GC content: 62.58

Gene sequence:

>1542_bases
ATGCTGGATCTGGTGTCTATTCAAACAAAACTCGAACTTCCATCAGATGTCGGCGGCAGCGGCCTGCTGGTGGGCTGGTC
CATGGAGCTTGAGCACAAGCGGACACCGATCGGTTTCTCGTTCGGAGATCCCGACTGCACGCCGGCAACCGGATATATTG
ACCCGATCCTGATGGAGCTTGAGGGACACCTCATGACCATCGCGCCCACCGGCGCGGGCAAAGGCGTCGGCTGTATCGTG
CCGGCGCTGCTGCGCTATGACGGGCCGCTGATCGTTATAGATCCGAAAGGCGAAAACGCGCTGATAACGGCGCGCCGGCG
GAGAGAGCTTGGCCATACGGTCGCGATTATCGATCCTATCGGTATTACCGGCCTGCCATCAACGCCGCTGAACCCGCTCG
ATCTGCTGGATCCCTCCAGCCCGACGCTTGTCGATGATGCGATGGCGATCATTGCGACAATGATCGACAGCCGATTGGGC
CGGAACGCCAGTGATGGTGATTACTGGTCTGAGCGCGGAGCCACGCTCGTGCTGGGCGTTATCCTGCATGTTGTCTCGGA
CCTGCCTTCTGACCGCCGCCACCTGGGTACGGTGCGCGAACTCGTGGCGCAGGCGATGGGCGAGGCTGGGGTGTATTCCC
AGATGGCGGAGAATCCGGCGTCCGCGCCCTCAAGCGCCAAGACGGTGCTCGGCGCGCTTGAGCGATCACGCAATTCCGAG
GCGGTGCGGATTGGACAGATGTTGCGCCTGGGCGCGGTTTCGACGCTGGGCGGTATTCTCTCTTTTGCCCAGTCTATCGT
GGAAGTGGCGCGGGGCGACGCAATCACCAAAAGCCTCTCCTCGACCGGGTTTGATCTGGACGCGGTAACGCGCGGCGATC
CGCTGTCGATCTACCTTGTCCTGCCTCCGCACATGCTCGACAGCCACGGCAAGCTGCTCCGGCTTTGGGTTCACACGCTG
ATGACGCTGATCACACGGCGCAACGCCCGGCCCAAGAAATCGACCTTATTCCTGCTGGATGAGGCCGCGCAGCTGGGCAC
GTTCACGCCGCTGCGCCGGGCAGTGACGCTGATGCGGGGTTATGGGCTGCAGACGTGGAGCTTCTGGCAAGACCCGAGCC
AGCTGCGCAATCTCTATCCGGATGACTGGCAGACGATGGTGAACAATTGCCGGGCTGTGCAGTGTTTTGGGGCGAACACG
ATGCTGGCGGCTGAAGCAATGGCCGCAATCGTCGGCTTCCGGCCCGCCGACCGGCTGCTGGATCTGGCGGACAATGAAAT
GCTGCTTCAATTGTCTGGGGACGCGCCGGTGCTGGCCCGCCTGCCCAGCTATCTGACGGACCCCGCGTTTGCGGGAACTT
ATGATGCCAATCCGTTTCATGATCCGAGCCGCCCGGTGATGCGGCCTGCGCCGGCGGTGGAGCGTGTTGTGGTCCGCCGC
CCCAAAGGACAGGCCAAGACAGAGGCCATGAGCCCGGCCGAGCTGATCAAAGCCCTGAAGGAAAAGCCAAACCCGGACGC
TACACCGGGCGCCCAGGACTGA

Upstream 100 bases:

>100_bases
AAATGATTGAAGATGAAGAACTGATGGCGGGATTGCCGGTGCGCGAGGAAAGTCTCGTAGGCCCGATGATCATCAGCCGG
ATTTGATCGCGCGGGGAAAC

Downstream 100 bases:

>100_bases
TAGAGCCTCAGAATATCAAATAAAAACCGGGCCATGCGAACACAGCCCGGTTTCCAATGAGATATGATCGTCGAAGAATT
GCTTACGCGAACTTTGCGCG

Product: TraG/TraD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 513; Mature: 513

Protein sequence:

>513_residues
MLDLVSIQTKLELPSDVGGSGLLVGWSMELEHKRTPIGFSFGDPDCTPATGYIDPILMELEGHLMTIAPTGAGKGVGCIV
PALLRYDGPLIVIDPKGENALITARRRRELGHTVAIIDPIGITGLPSTPLNPLDLLDPSSPTLVDDAMAIIATMIDSRLG
RNASDGDYWSERGATLVLGVILHVVSDLPSDRRHLGTVRELVAQAMGEAGVYSQMAENPASAPSSAKTVLGALERSRNSE
AVRIGQMLRLGAVSTLGGILSFAQSIVEVARGDAITKSLSSTGFDLDAVTRGDPLSIYLVLPPHMLDSHGKLLRLWVHTL
MTLITRRNARPKKSTLFLLDEAAQLGTFTPLRRAVTLMRGYGLQTWSFWQDPSQLRNLYPDDWQTMVNNCRAVQCFGANT
MLAAEAMAAIVGFRPADRLLDLADNEMLLQLSGDAPVLARLPSYLTDPAFAGTYDANPFHDPSRPVMRPAPAVERVVVRR
PKGQAKTEAMSPAELIKALKEKPNPDATPGAQD

Sequences:

>Translated_513_residues
MLDLVSIQTKLELPSDVGGSGLLVGWSMELEHKRTPIGFSFGDPDCTPATGYIDPILMELEGHLMTIAPTGAGKGVGCIV
PALLRYDGPLIVIDPKGENALITARRRRELGHTVAIIDPIGITGLPSTPLNPLDLLDPSSPTLVDDAMAIIATMIDSRLG
RNASDGDYWSERGATLVLGVILHVVSDLPSDRRHLGTVRELVAQAMGEAGVYSQMAENPASAPSSAKTVLGALERSRNSE
AVRIGQMLRLGAVSTLGGILSFAQSIVEVARGDAITKSLSSTGFDLDAVTRGDPLSIYLVLPPHMLDSHGKLLRLWVHTL
MTLITRRNARPKKSTLFLLDEAAQLGTFTPLRRAVTLMRGYGLQTWSFWQDPSQLRNLYPDDWQTMVNNCRAVQCFGANT
MLAAEAMAAIVGFRPADRLLDLADNEMLLQLSGDAPVLARLPSYLTDPAFAGTYDANPFHDPSRPVMRPAPAVERVVVRR
PKGQAKTEAMSPAELIKALKEKPNPDATPGAQD
>Mature_513_residues
MLDLVSIQTKLELPSDVGGSGLLVGWSMELEHKRTPIGFSFGDPDCTPATGYIDPILMELEGHLMTIAPTGAGKGVGCIV
PALLRYDGPLIVIDPKGENALITARRRRELGHTVAIIDPIGITGLPSTPLNPLDLLDPSSPTLVDDAMAIIATMIDSRLG
RNASDGDYWSERGATLVLGVILHVVSDLPSDRRHLGTVRELVAQAMGEAGVYSQMAENPASAPSSAKTVLGALERSRNSE
AVRIGQMLRLGAVSTLGGILSFAQSIVEVARGDAITKSLSSTGFDLDAVTRGDPLSIYLVLPPHMLDSHGKLLRLWVHTL
MTLITRRNARPKKSTLFLLDEAAQLGTFTPLRRAVTLMRGYGLQTWSFWQDPSQLRNLYPDDWQTMVNNCRAVQCFGANT
MLAAEAMAAIVGFRPADRLLDLADNEMLLQLSGDAPVLARLPSYLTDPAFAGTYDANPFHDPSRPVMRPAPAVERVVVRR
PKGQAKTEAMSPAELIKALKEKPNPDATPGAQD

Specific function: Required for conjugative transfer of plasmid RP4. Binds tightly and specifically to the relaxase traI. Can also bind to DNA without sequence specificity. May form a pore-like structure that could serve as a channel for DNA transfer [H]

COG id: COG3505

COG function: function code U; Type IV secretory pathway, VirD4 components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the virD4/traG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003688 [H]

Pfam domain/function: PF02534 TraG [H]

EC number: NA

Molecular weight: Translated: 55255; Mature: 55255

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLVSIQTKLELPSDVGGSGLLVGWSMELEHKRTPIGFSFGDPDCTPATGYIDPILMEL
CCCCEEEHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
EGHLMTIAPTGAGKGVGCIVPALLRYDGPLIVIDPKGENALITARRRRELGHTVAIIDPI
CCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCEEEHHHHHHCCCEEEEECCC
GITGLPSTPLNPLDLLDPSSPTLVDDAMAIIATMIDSRLGRNASDGDYWSERGATLVLGV
CCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHH
ILHVVSDLPSDRRHLGTVRELVAQAMGEAGVYSQMAENPASAPSSAKTVLGALERSRNSE
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
AVRIGQMLRLGAVSTLGGILSFAQSIVEVARGDAITKSLSSTGFDLDAVTRGDPLSIYLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEECCCCCEEEEEE
LPPHMLDSHGKLLRLWVHTLMTLITRRNARPKKSTLFLLDEAAQLGTFTPLRRAVTLMRG
ECCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHCCCHHHHHHHHHHHC
YGLQTWSFWQDPSQLRNLYPDDWQTMVNNCRAVQCFGANTMLAAEAMAAIVGFRPADRLL
CCCCCCCCCCCHHHHHCCCCCHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHH
DLADNEMLLQLSGDAPVLARLPSYLTDPAFAGTYDANPFHDPSRPVMRPAPAVERVVVRR
HHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
PKGQAKTEAMSPAELIKALKEKPNPDATPGAQD
CCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLDLVSIQTKLELPSDVGGSGLLVGWSMELEHKRTPIGFSFGDPDCTPATGYIDPILMEL
CCCCEEEHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
EGHLMTIAPTGAGKGVGCIVPALLRYDGPLIVIDPKGENALITARRRRELGHTVAIIDPI
CCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCEEEHHHHHHCCCEEEEECCC
GITGLPSTPLNPLDLLDPSSPTLVDDAMAIIATMIDSRLGRNASDGDYWSERGATLVLGV
CCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHH
ILHVVSDLPSDRRHLGTVRELVAQAMGEAGVYSQMAENPASAPSSAKTVLGALERSRNSE
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
AVRIGQMLRLGAVSTLGGILSFAQSIVEVARGDAITKSLSSTGFDLDAVTRGDPLSIYLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEECCCCCEEEEEE
LPPHMLDSHGKLLRLWVHTLMTLITRRNARPKKSTLFLLDEAAQLGTFTPLRRAVTLMRG
ECCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHCCCHHHHHHHHHHHC
YGLQTWSFWQDPSQLRNLYPDDWQTMVNNCRAVQCFGANTMLAAEAMAAIVGFRPADRLL
CCCCCCCCCCCHHHHHCCCCCHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHH
DLADNEMLLQLSGDAPVLARLPSYLTDPAFAGTYDANPFHDPSRPVMRPAPAVERVVVRR
HHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
PKGQAKTEAMSPAELIKALKEKPNPDATPGAQD
CCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1665997; 8021214; 11976307 [H]