| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797567
Identifier: 114797567
GI number: 114797567
Start: 2763315
End: 2764325
Strand: Direct
Name: 114797567
Synonym: HNE_2601
Alternate gene names: NA
Gene position: 2763315-2764325 (Clockwise)
Preceding gene: 114800437
Following gene: 114800291
Centisome position: 74.58
GC content: 64.39
Gene sequence:
>1011_bases GTGTCCCGATCTGTCCCGGAAGTGTCCGCGCGTGACGGGCTTTGGCGCGCCTCTGACCATGCCGAAACGCTGATTGCCGC CTCCTGCCCGGCGGGCACACGGCGCCAGCAGCCTCTGCCGATTGATCTGGCCGTAACCCCGGTTTCCCTCGGCCAACCCG ATCAGATTGCGCGCCAGCTGCCCGAAACTGTAAGCATTTCAGGGGCCTGGGAACTCTCGTCCAGCAACTCCAATCTCGGC GGTCTCTCCGGCCTGGCCCTCTTGCCCGCCTCGCAAGGCGGCGGCCTGCTCACCGTCTCCGATGCGGGCGCCTTCGTCTG GATCGACCTGGAAAACGGCGCCCCCACCGCCGCAAAAATCGCCTATATGCAAGGCTCTGACGGCGCCCAGCTCACCGGCA AGGCAGAAGGCGACGCCGAAGGGCTCGTCTGGTCTGATGGTCTCGCCCTCGTCAGCTTCGAGCGCGCCTTCCGCATCGAA GCCTTCGCCCTGAGCGCCTGCGGATCTGCGGCCCGCGCCGCGCGCGTTGCCACCCTCCCGGATAAGCACGATAATCGCAA TATCGATGAAAATCAGGGTCCTGAGGCAATTTTTCTCACGCCGGAAGGCGCCCTCGGCTTTGGCTATGAGGGCATGCTCA GCATCTCGCCGCTCGGCCAGGTAAACGCCAATGGCACCGCCGCCTGGACCGGTGAACGGGCTTCCGCTCCGGCCCTGTAT GGCCTTGTCGCCCGCGAGACTGTCACCCTGCCAGACGGATCGCATCGCGCCGTGGAGATGTTCCGCGCCTGGGACCCGAT CCGGGGCAACCGCATTCGTCTGACATGGGGGAAAAGCGACGCAGACTCCCTAACGCTCAGCCGCCCCCTGCTGGTGGATA ATTTCGAGGGCCTCGCCGCAGAACCCCTGCAGAATGGGGCGATCCGCGTCTGGATAGTGTCGGACAACAACTTTTCGGGC AGCCAGCGAACCCTGCTCTATGCCTTCGATATTACAATCTCACAGAGCTGA
Upstream 100 bases:
>100_bases GGCCCTCTTTGCGGCAAGCCTGATCCCGGCCTGCGCGGCGCCCCAGGATGCCGGCGCAGGGGCCGCGCCCGTCATTGAAA CTGTCCCGAAACGTCCTGAA
Downstream 100 bases:
>100_bases GCAGTGTATGCCGCTTCCCAAAGGCATGGGGAGCCACTAGATTTGCAAAGCACAAGGGCTGCTGCGCCCGCATGGGACTG ATCTCCGGCGACCTTACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MSRSVPEVSARDGLWRASDHAETLIAASCPAGTRRQQPLPIDLAVTPVSLGQPDQIARQLPETVSISGAWELSSSNSNLG GLSGLALLPASQGGGLLTVSDAGAFVWIDLENGAPTAAKIAYMQGSDGAQLTGKAEGDAEGLVWSDGLALVSFERAFRIE AFALSACGSAARAARVATLPDKHDNRNIDENQGPEAIFLTPEGALGFGYEGMLSISPLGQVNANGTAAWTGERASAPALY GLVARETVTLPDGSHRAVEMFRAWDPIRGNRIRLTWGKSDADSLTLSRPLLVDNFEGLAAEPLQNGAIRVWIVSDNNFSG SQRTLLYAFDITISQS
Sequences:
>Translated_336_residues MSRSVPEVSARDGLWRASDHAETLIAASCPAGTRRQQPLPIDLAVTPVSLGQPDQIARQLPETVSISGAWELSSSNSNLG GLSGLALLPASQGGGLLTVSDAGAFVWIDLENGAPTAAKIAYMQGSDGAQLTGKAEGDAEGLVWSDGLALVSFERAFRIE AFALSACGSAARAARVATLPDKHDNRNIDENQGPEAIFLTPEGALGFGYEGMLSISPLGQVNANGTAAWTGERASAPALY GLVARETVTLPDGSHRAVEMFRAWDPIRGNRIRLTWGKSDADSLTLSRPLLVDNFEGLAAEPLQNGAIRVWIVSDNNFSG SQRTLLYAFDITISQS >Mature_335_residues SRSVPEVSARDGLWRASDHAETLIAASCPAGTRRQQPLPIDLAVTPVSLGQPDQIARQLPETVSISGAWELSSSNSNLGG LSGLALLPASQGGGLLTVSDAGAFVWIDLENGAPTAAKIAYMQGSDGAQLTGKAEGDAEGLVWSDGLALVSFERAFRIEA FALSACGSAARAARVATLPDKHDNRNIDENQGPEAIFLTPEGALGFGYEGMLSISPLGQVNANGTAAWTGERASAPALYG LVARETVTLPDGSHRAVEMFRAWDPIRGNRIRLTWGKSDADSLTLSRPLLVDNFEGLAAEPLQNGAIRVWIVSDNNFSGS QRTLLYAFDITISQS
Specific function: Unknown
COG id: COG4246
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35373; Mature: 35242
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSVPEVSARDGLWRASDHAETLIAASCPAGTRRQQPLPIDLAVTPVSLGQPDQIARQL CCCCCCCCHHCCCCEECCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHC PETVSISGAWELSSSNSNLGGLSGLALLPASQGGGLLTVSDAGAFVWIDLENGAPTAAKI CCEEEECEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEECCCEEEEEEECCCCCCEEEE AYMQGSDGAQLTGKAEGDAEGLVWSDGLALVSFERAFRIEAFALSACGSAARAARVATLP EEEECCCCCEEEECCCCCCCCEEEECCEEEEEECHHHEEEEEEEECCCCHHHHEEEEECC DKHDNRNIDENQGPEAIFLTPEGALGFGYEGMLSISPLGQVNANGTAAWTGERASAPALY CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCHHE GLVARETVTLPDGSHRAVEMFRAWDPIRGNRIRLTWGKSDADSLTLSRPLLVDNFEGLAA EEEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEECCCEEEECCCCCCC EPLQNGAIRVWIVSDNNFSGSQRTLLYAFDITISQS CCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEEECC >Mature Secondary Structure SRSVPEVSARDGLWRASDHAETLIAASCPAGTRRQQPLPIDLAVTPVSLGQPDQIARQL CCCCCCCHHCCCCEECCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHC PETVSISGAWELSSSNSNLGGLSGLALLPASQGGGLLTVSDAGAFVWIDLENGAPTAAKI CCEEEECEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEECCCEEEEEEECCCCCCEEEE AYMQGSDGAQLTGKAEGDAEGLVWSDGLALVSFERAFRIEAFALSACGSAARAARVATLP EEEECCCCCEEEECCCCCCCCEEEECCEEEEEECHHHEEEEEEEECCCCHHHHEEEEECC DKHDNRNIDENQGPEAIFLTPEGALGFGYEGMLSISPLGQVNANGTAAWTGERASAPALY CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCHHE GLVARETVTLPDGSHRAVEMFRAWDPIRGNRIRLTWGKSDADSLTLSRPLLVDNFEGLAA EEEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEECCCEEEECCCCCCC EPLQNGAIRVWIVSDNNFSGSQRTLLYAFDITISQS CCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA