Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114797548

Identifier: 114797548

GI number: 114797548

Start: 556898

End: 557365

Strand: Reverse

Name: 114797548

Synonym: HNE_0559

Alternate gene names: NA

Gene position: 557365-556898 (Counterclockwise)

Preceding gene: 114798551

Following gene: 114799046

Centisome position: 15.04

GC content: 60.9

Gene sequence:

>468_bases
ATGGACGAATGGCAACTCCCCTGGACCGCCACCTGCCTGTGCGGACAAGTGAAAATGAAGATCACGGCCCCGCCTTTGGT
CTCGATGGCCTGCCATTGCACAGGCTGCCAGAAACTGACGAGCGGCCCGTATTCGCTGTCACTCCTGCTGCCGGCAAACG
GTTTCGAGGTAACAGAAGGCGCCCCGGAAATCGGCGGCCTGCATACCGAGAACCAGCAGATGTTTTGCCCTCATTGCAAG
AACTGGCTGTTCACGCGGCTCCCCGGCATGCCTTTCGTGAATTTTCGGCCGGGCATGCTGGAAGACGCCAGCTGGGTACG
TCCCATCATCGAGACGATGACGCGCGAACGCCTTCCCTACGCTCAGACCGGCGCAGAATTCAGCTATGAGGGCTTCCCCG
CACCGGAAGACTATGGCCCGGCCATGGCGGCATTTGCCGACCATGGCGCGCGTCCACCTGCACTTTGA

Upstream 100 bases:

>100_bases
TCGACCCGATGATCACCCACGTCATGACGCTGGACAAGATCAACGACGCTTTTGACCTGATGCATGAGGGCAAGTCGATC
CGCAGCGTGGTTGTGTACTG

Downstream 100 bases:

>100_bases
ACTAAGATCAACAAACGGAGGAAATACCAAAATGTTCAGTCACGTAATGGTCGGGTCTAACGACATCGGCAAATCCCAGA
AATTCTATGACGCCCTGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde Activating

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MDEWQLPWTATCLCGQVKMKITAPPLVSMACHCTGCQKLTSGPYSLSLLLPANGFEVTEGAPEIGGLHTENQQMFCPHCK
NWLFTRLPGMPFVNFRPGMLEDASWVRPIIETMTRERLPYAQTGAEFSYEGFPAPEDYGPAMAAFADHGARPPAL

Sequences:

>Translated_155_residues
MDEWQLPWTATCLCGQVKMKITAPPLVSMACHCTGCQKLTSGPYSLSLLLPANGFEVTEGAPEIGGLHTENQQMFCPHCK
NWLFTRLPGMPFVNFRPGMLEDASWVRPIIETMTRERLPYAQTGAEFSYEGFPAPEDYGPAMAAFADHGARPPAL
>Mature_155_residues
MDEWQLPWTATCLCGQVKMKITAPPLVSMACHCTGCQKLTSGPYSLSLLLPANGFEVTEGAPEIGGLHTENQQMFCPHCK
NWLFTRLPGMPFVNFRPGMLEDASWVRPIIETMTRERLPYAQTGAEFSYEGFPAPEDYGPAMAAFADHGARPPAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17095; Mature: 17095

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
9.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEWQLPWTATCLCGQVKMKITAPPLVSMACHCTGCQKLTSGPYSLSLLLPANGFEVTEG
CCCCCCCCHHEEEECEEEEEEECCCHHHHHHHCCCCHHHCCCCCEEEEEECCCCCCCCCC
APEIGGLHTENQQMFCPHCKNWLFTRLPGMPFVNFRPGMLEDASWVRPIIETMTRERLPY
CCCCCCEECCCCCEECCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
AQTGAEFSYEGFPAPEDYGPAMAAFADHGARPPAL
CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDEWQLPWTATCLCGQVKMKITAPPLVSMACHCTGCQKLTSGPYSLSLLLPANGFEVTEG
CCCCCCCCHHEEEECEEEEEEECCCHHHHHHHCCCCHHHCCCCCEEEEEECCCCCCCCCC
APEIGGLHTENQQMFCPHCKNWLFTRLPGMPFVNFRPGMLEDASWVRPIIETMTRERLPY
CCCCCCEECCCCCEECCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
AQTGAEFSYEGFPAPEDYGPAMAAFADHGARPPAL
CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA