| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is nadR [H]
Identifier: 114797512
GI number: 114797512
Start: 1183875
End: 1184483
Strand: Reverse
Name: nadR [H]
Synonym: HNE_1175
Alternate gene names: 114797512
Gene position: 1184483-1183875 (Counterclockwise)
Preceding gene: 114798743
Following gene: 114800352
Centisome position: 31.97
GC content: 64.7
Gene sequence:
>609_bases ATGGCGCAAATCGGTGAATGCATGACCTGCAACAAACCCCTGCGCGTCGTCCTGATCGGCGCCGAATCCACCGGCAAGAC CACGCTCTGCATCGAGCTGGCCGCCCATTACAACACCGTCTGGGTCGCCGAATTCGGCCGGGAACTCTGGGAACAGAAAC TCGCCGCCCAGTCCCTCAAGGGCGGCGACATTCCCGAATGGACCGATGAGGATTTCATCCACATTGCGCAGGAACAGCAG CGCCGCGAAAACGAAGCCGCCACCCGCGCCAACGGTATCCTCTTCGCCGACACCAACGCCTTCGCCACCGCCACCTGGTA CGAACGCTATGCCGGCAAGCGCCACCCTGAGGTGGACGCGATAGGCGACCGCGACCAGGTCGATCTCTACCTCATCCCCA CCCCGGAAGTCCCCTTTGTGCAGGACGGTGTGCGCGACGGCGAGAAGATCCGCGGCTGGATGCACGACCGGTTCGTCGAG CTGATCGAGAAGGCAGGTATTCCGTACACGCTCATTACCGGCCCCTGGGAAGGCCGCGTCGAGCAGGCCACCGCCGCCAT CGACGCCCTCCTCGCCCGTTGCCAGGCCGAGGCTCTGCCCGCCCCATGA
Upstream 100 bases:
>100_bases CCGACATTATCTACATCCCCGTCTGCCTGTTTAACGGCCTTTACCTGACGGCCCTTCTGTATGCGGTGTTTCTGGCGCTC TCAGTCATGGGCCTGCTGGA
Downstream 100 bases:
>100_bases GCGAAATCACGATCCGCCGCGCGCAGGCCCACGATGCCGAGCGTCTCGCCCATATTGGCGTGGCCACCTTCATCGACAGC TATGTCTTCGACATCGACGG
Product: putative nicotinamide-nucleotide adenylyltransferase
Products: NA
Alternate protein names: Transcriptional regulator NadR; Nicotinamide mononucleotide adenylyltransferase; NMN adenylyltransferase; NMN-AT; NMNAT; Nicotinamide ribonucleotide adenylyltransferase; Nicotinamide-nucleotide adenylyltransferase; Ribosylnicotinamide kinase; RNK; Nicotinamide riboside kinase; NRK; NmR-K [H]
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MAQIGECMTCNKPLRVVLIGAESTGKTTLCIELAAHYNTVWVAEFGRELWEQKLAAQSLKGGDIPEWTDEDFIHIAQEQQ RRENEAATRANGILFADTNAFATATWYERYAGKRHPEVDAIGDRDQVDLYLIPTPEVPFVQDGVRDGEKIRGWMHDRFVE LIEKAGIPYTLITGPWEGRVEQATAAIDALLARCQAEALPAP
Sequences:
>Translated_202_residues MAQIGECMTCNKPLRVVLIGAESTGKTTLCIELAAHYNTVWVAEFGRELWEQKLAAQSLKGGDIPEWTDEDFIHIAQEQQ RRENEAATRANGILFADTNAFATATWYERYAGKRHPEVDAIGDRDQVDLYLIPTPEVPFVQDGVRDGEKIRGWMHDRFVE LIEKAGIPYTLITGPWEGRVEQATAAIDALLARCQAEALPAP >Mature_201_residues AQIGECMTCNKPLRVVLIGAESTGKTTLCIELAAHYNTVWVAEFGRELWEQKLAAQSLKGGDIPEWTDEDFIHIAQEQQR RENEAATRANGILFADTNAFATATWYERYAGKRHPEVDAIGDRDQVDLYLIPTPEVPFVQDGVRDGEKIRGWMHDRFVEL IEKAGIPYTLITGPWEGRVEQATAAIDALLARCQAEALPAP
Specific function: This enzyme has three activities:DNA binding, nicotinamide mononucleotide (NMN) adenylyltransferase and ribosylnicotinamide (RN) kinase. The DNA-binding domain binds to the nadB operator sequence in an NAD- and ATP-dependent manner. As NAD levels increase
COG id: COG3172
COG function: function code H; Predicted ATPase/kinase involved in NAD metabolism
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein. Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI87082440, Length=181, Percent_Identity=30.3867403314917, Blast_Score=73, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016429 - InterPro: IPR004821 - InterPro: IPR001387 - InterPro: IPR010982 - InterPro: IPR006417 - InterPro: IPR014729 [H]
Pfam domain/function: PF01381 HTH_3 [H]
EC number: =2.7.7.1; =2.7.1.22 [H]
Molecular weight: Translated: 22569; Mature: 22437
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQIGECMTCNKPLRVVLIGAESTGKTTLCIELAAHYNTVWVAEFGRELWEQKLAAQSLK CCCCCCCEECCCCEEEEEEECCCCCCEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHCC GGDIPEWTDEDFIHIAQEQQRRENEAATRANGILFADTNAFATATWYERYAGKRHPEVDA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEHHHHHHHHCCCCCCCCCC IGDRDQVDLYLIPTPEVPFVQDGVRDGEKIRGWMHDRFVELIEKAGIPYTLITGPWEGRV CCCCCCEEEEEECCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHH EQATAAIDALLARCQAEALPAP HHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AQIGECMTCNKPLRVVLIGAESTGKTTLCIELAAHYNTVWVAEFGRELWEQKLAAQSLK CCCCCCEECCCCEEEEEEECCCCCCEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHCC GGDIPEWTDEDFIHIAQEQQRRENEAATRANGILFADTNAFATATWYERYAGKRHPEVDA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEHHHHHHHHCCCCCCCCCC IGDRDQVDLYLIPTPEVPFVQDGVRDGEKIRGWMHDRFVELIEKAGIPYTLITGPWEGRV CCCCCCEEEEEECCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHH EQATAAIDALLARCQAEALPAP HHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 1327967 [H]