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The map label for this gene is ssb [H]

Identifier: 114797480

GI number: 114797480

Start: 2924846

End: 2925337

Strand: Reverse

Name: ssb [H]

Synonym: HNE_2764

Alternate gene names: 114797480

Gene position: 2925337-2924846 (Counterclockwise)

Preceding gene: 114799509

Following gene: 114799804

Centisome position: 78.96

GC content: 62.2

Gene sequence:

>492_bases
ATGGCGGGATCGGTAAACAAGGTCATTCTGGTGGGCAATCTCGGGGCTGACCCCGAAGTGAAGCAGTTCCAGAATGGCGG
GCAGGTCTGCAACCTGCGCATCGCAACCTCGGAAACCTGGCGCGACAAGGCGTCGGGCGAGCGCAAGGAGCGCACCGAAT
GGCACACCGTGGCCATCTTTTCCGAAGGCCTGGTCAAGGTTGCCCAGAGTTATCTGAAAAAGGGCTCCAAGGTTTATCTT
GAGGGCAAGCTGCAGACCCGCAAATGGCAGGACAAGGACGGCAACGACCGGTACACGACCGAGATTGTCCTGCAGGGCTT
TGATGCCACGCTGGTGATGCTCGACGGTCGCGGCGAAGGCGGCGGCGCCAGTGCCGGCGGCGGTGGCCGTGACATGGGCT
ATTCGGGCGGCGGCAATGGCGGCGGACGCCAGCAGATGAGCGGCCCGAAAGAAAGCTTCAGCCAGGATCTCGACGACGAG
ATCCCGTTCTGA

Upstream 100 bases:

>100_bases
GGGCGGTGGAATTTCGTCCCGATGAGGCGACATGGGGACCGGGGAAGAGTAGAACAACTCGAATCGGACTCGAAACAGTA
TTTCAGCGCGGAGGCCCCAC

Downstream 100 bases:

>100_bases
GGAGGACTGCATGACCGCTGCTTCCGCTTCTTCGAGGACGGGCCCGTGGGGCGCCTTGCTGATGCTGGCAGTCGCGGTCC
TGGCGGCCTGCGCCAGCCCG

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MAGSVNKVILVGNLGADPEVKQFQNGGQVCNLRIATSETWRDKASGERKERTEWHTVAIFSEGLVKVAQSYLKKGSKVYL
EGKLQTRKWQDKDGNDRYTTEIVLQGFDATLVMLDGRGEGGGASAGGGGRDMGYSGGGNGGGRQQMSGPKESFSQDLDDE
IPF

Sequences:

>Translated_163_residues
MAGSVNKVILVGNLGADPEVKQFQNGGQVCNLRIATSETWRDKASGERKERTEWHTVAIFSEGLVKVAQSYLKKGSKVYL
EGKLQTRKWQDKDGNDRYTTEIVLQGFDATLVMLDGRGEGGGASAGGGGRDMGYSGGGNGGGRQQMSGPKESFSQDLDDE
IPF
>Mature_162_residues
AGSVNKVILVGNLGADPEVKQFQNGGQVCNLRIATSETWRDKASGERKERTEWHTVAIFSEGLVKVAQSYLKKGSKVYLE
GKLQTRKWQDKDGNDRYTTEIVLQGFDATLVMLDGRGEGGGASAGGGGRDMGYSGGGNGGGRQQMSGPKESFSQDLDDEI
PF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=108, Percent_Identity=37.037037037037, Blast_Score=79, Evalue=2e-15,
Organism=Escherichia coli, GI1790494, Length=176, Percent_Identity=48.8636363636364, Blast_Score=155, Evalue=2e-39,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 17523; Mature: 17391

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSVNKVILVGNLGADPEVKQFQNGGQVCNLRIATSETWRDKASGERKERTEWHTVAIF
CCCCCCEEEEEECCCCCCHHHHHCCCCCEEEEEEECCCCHHHHCCCCCCCCCCCEEEEEH
SEGLVKVAQSYLKKGSKVYLEGKLQTRKWQDKDGNDRYTTEIVLQGFDATLVMLDGRGEG
HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCC
GGASAGGGGRDMGYSGGGNGGGRQQMSGPKESFSQDLDDEIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure 
AGSVNKVILVGNLGADPEVKQFQNGGQVCNLRIATSETWRDKASGERKERTEWHTVAIF
CCCCCEEEEEECCCCCCHHHHHCCCCCEEEEEEECCCCHHHHCCCCCCCCCCCEEEEEH
SEGLVKVAQSYLKKGSKVYLEGKLQTRKWQDKDGNDRYTTEIVLQGFDATLVMLDGRGEG
HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCC
GGASAGGGGRDMGYSGGGNGGGRQQMSGPKESFSQDLDDEIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]