| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is bla [H]
Identifier: 114799804
GI number: 114799804
Start: 2923963
End: 2924784
Strand: Reverse
Name: bla [H]
Synonym: HNE_2763
Alternate gene names: 114799804
Gene position: 2924784-2923963 (Counterclockwise)
Preceding gene: 114797480
Following gene: 114798624
Centisome position: 78.94
GC content: 67.03
Gene sequence:
>822_bases ATGCTGGCAGTCGCGGTCCTGGCGGCCTGCGCCAGCCCGGCGGCGAGCATCCCCGTGGCAGAACCCCGCCTGCTTGAGCA GGCCCTGCTTGCCGAGGGGGTTAGCCCGGCGGATTCGGCGCTGGTGATCTATCGGCTTGAGGATGAAAAGGTCTGGGCGA GCGGCGGCGCGCGCATTCGCGAGCGGTTTACGCCCGCCTCGACCTCGAAAATCCCCCACACCCTTCTGGCGCTGGAAACC GGCGCCGTCACAGGGCCGGAGGAAAGCTTCGAGTGGGACGGGGAAACCCGCTTTGTCGACAGCTGGAATGAAGATCAGGA TTTCGCGGCCGCCTTCCAGCGCTCTACCGTCTGGATCTATCAGATCGTTGTGCCCCGCATCGGCGCGGCCCGCCTCACCG AAGGCCTTGAGGCCTTCGGCTATGGCAATGCCGACATCGGCGGGCCGGAAATGATCACCCGCTACTGGCTGGAAGGCCCG CTCGCCATTTCGGCGACCGAGCAGGTGGAATTCCTCTCCCGCCTTGCCCGCCGCACGCTGCCCCTCTCGGCCCGCACCTA TGATCTGGCGGTGCCGGTCATGGAAGTCGATCGCGGCGAGGGCTGGACGCTCTACGGCAAGACCGGCTGGAAAAGCGTCG AAGGCCAGATGGACATCGGCTGGTATGTCGGCTGGGTCGAACAGTCCTCCGGCGAGGCGCCGGGCACCTACGCCTTCGCC CTCAACATGGACATGCCCGGCGGCATGGACGAGGCCCCCAAACGCCGCGCAGCCGTGGAACGCGCGCTTCGCGCGATTGG CGCCCTTCCGGTAGCCCAGTAA
Upstream 100 bases:
>100_bases AGCTTCAGCCAGGATCTCGACGACGAGATCCCGTTCTGAGGAGGACTGCATGACCGCTGCTTCCGCTTCTTCGAGGACGG GCCCGTGGGGCGCCTTGCTG
Downstream 100 bases:
>100_bases CTTTCCGCCTAGTCCCGCTCCGGCGCGCCGAGCGGAAAATACGGCCGGAAATAGCGCGCATCGTCCACGGCGCGCGCAAA AGATGGCCGCGCCAGAAGCC
Product: putative beta-lactamase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MLAVAVLAACASPAASIPVAEPRLLEQALLAEGVSPADSALVIYRLEDEKVWASGGARIRERFTPASTSKIPHTLLALET GAVTGPEESFEWDGETRFVDSWNEDQDFAAAFQRSTVWIYQIVVPRIGAARLTEGLEAFGYGNADIGGPEMITRYWLEGP LAISATEQVEFLSRLARRTLPLSARTYDLAVPVMEVDRGEGWTLYGKTGWKSVEGQMDIGWYVGWVEQSSGEAPGTYAFA LNMDMPGGMDEAPKRRAAVERALRAIGALPVAQ
Sequences:
>Translated_273_residues MLAVAVLAACASPAASIPVAEPRLLEQALLAEGVSPADSALVIYRLEDEKVWASGGARIRERFTPASTSKIPHTLLALET GAVTGPEESFEWDGETRFVDSWNEDQDFAAAFQRSTVWIYQIVVPRIGAARLTEGLEAFGYGNADIGGPEMITRYWLEGP LAISATEQVEFLSRLARRTLPLSARTYDLAVPVMEVDRGEGWTLYGKTGWKSVEGQMDIGWYVGWVEQSSGEAPGTYAFA LNMDMPGGMDEAPKRRAAVERALRAIGALPVAQ >Mature_273_residues MLAVAVLAACASPAASIPVAEPRLLEQALLAEGVSPADSALVIYRLEDEKVWASGGARIRERFTPASTSKIPHTLLALET GAVTGPEESFEWDGETRFVDSWNEDQDFAAAFQRSTVWIYQIVVPRIGAARLTEGLEAFGYGNADIGGPEMITRYWLEGP LAISATEQVEFLSRLARRTLPLSARTYDLAVPVMEVDRGEGWTLYGKTGWKSVEGQMDIGWYVGWVEQSSGEAPGTYAFA LNMDMPGGMDEAPKRRAAVERALRAIGALPVAQ
Specific function: Hydrolyzes oxacillin, first-generation cephalosporins and ceftazidime. Does not hydrolyze cefotaxime or carbapenems [H]
COG id: COG2602
COG function: function code V; Beta-lactamase class D
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-D beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR002137 - InterPro: IPR001460 [H]
Pfam domain/function: PF00905 Transpeptidase [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 29639; Mature: 29639
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAVAVLAACASPAASIPVAEPRLLEQALLAEGVSPADSALVIYRLEDEKVWASGGARIR CHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCEEECCCCHHHH ERFTPASTSKIPHTLLALETGAVTGPEESFEWDGETRFVDSWNEDQDFAAAFQRSTVWIY HHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCEEEEE QIVVPRIGAARLTEGLEAFGYGNADIGGPEMITRYWLEGPLAISATEQVEFLSRLARRTL EEEHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCC PLSARTYDLAVPVMEVDRGEGWTLYGKTGWKSVEGQMDIGWYVGWVEQSSGEAPGTYAFA CCCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEE LNMDMPGGMDEAPKRRAAVERALRAIGALPVAQ EECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLAVAVLAACASPAASIPVAEPRLLEQALLAEGVSPADSALVIYRLEDEKVWASGGARIR CHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCEEECCCCHHHH ERFTPASTSKIPHTLLALETGAVTGPEESFEWDGETRFVDSWNEDQDFAAAFQRSTVWIY HHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCEEEEE QIVVPRIGAARLTEGLEAFGYGNADIGGPEMITRYWLEGPLAISATEQVEFLSRLARRTL EEEHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCC PLSARTYDLAVPVMEVDRGEGWTLYGKTGWKSVEGQMDIGWYVGWVEQSSGEAPGTYAFA CCCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEE LNMDMPGGMDEAPKRRAAVERALRAIGALPVAQ EECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9087490 [H]