| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is putP2 [H]
Identifier: 114797475
GI number: 114797475
Start: 1682263
End: 1683714
Strand: Direct
Name: putP2 [H]
Synonym: HNE_1645
Alternate gene names: 114797475
Gene position: 1682263-1683714 (Clockwise)
Preceding gene: 114798292
Following gene: 114799816
Centisome position: 45.4
GC content: 62.53
Gene sequence:
>1452_bases ATGATCACTGCTATCAGCTTCGTCCTTATACTGCTTTCCTTTGTGGTCATCGGCCTCGCTTCTGGCCGTAAGGCAACAGG CAAGCGAAAGGATTATTATCTGGCCAGCAGCAGCGTCAGCCCCTGGCTCGCGGGGCTTTCGGCGGTCGCCACAAACAATT CCGGCTACATGTTCATCGGCGTCATAGGTTTCACCTACCAGACAGGCCTGGCGGCCATGTGGCTGATGATCGGCTGGATC GTGGGCGACTTCATCGGCTCCAGCTTCATTCACAAACGCCTGCGCCAGGCCACGGCAAAAACCGGTGAGGCCTCCTTCGC CGGGGTCATCGCCCGTTGGTATGGCGAGAAGTTCGGCATCTGGCAGAAGATTGCCGGCGTCATCATGATCGTTTTCCTGA TCGCCTATGCCGCCGCCCAGATTTCCGCAGGCGGCAAGGCGCTGGAAGGCGTCCTCGGTATCAACCCATGGACCGGCGCC GTCATGGTCGCCGCCATGGTGCTGCTATACTCGATCGTCGGCGGCATCCGCGCTTCCATCTGGACCGATGGCGCCCAGTC CATCACCATGATGTTCGCCATGACCATCCTGCTCATCGCCGCCTTCGCGGGTGTAGGCGGCGTCAGCGGCGCACTGGAAC TCTGGAGCGCCATCCCCGGTTTCCTTGATCCTTTCCCGGATGATCTTCTCTTTCCCGGCGCGCTCGGCATGGGGCTCTTT ATTGTCGGTTGGCTGTTCGCCGGTTTCTCCGTGGTCGGCCAGCCCCATGTGATGGTCCGCTTCATGGCGCTCGATCACGA CCGCAATATGGGCCGCGCCCGCGCCTGGTATTATGGCTACTTCACCATCTTCTATCTCCTCGCCACCGGGGTAGGCATGC TCTCGCGCCTCTATCTGCCAGACCTTGCCGACATCGACCCCGAACTCGCCCTGCCCATGATGGCAACAGAGCTTCTCCCG CCCGTCCTGGTCGGCGTGATCCTTGCGGGCATTTTCGCGGCCACCATGTCGACGGCGGACTCTCTGGTCCTCTCCTGTTC GGCGTCCTTCACCCACGATCTGGCGCCCGAACGGCTTGAGACCCCGCTCATCCTCAAGACGGCAACTGCCGTCTCCATCC TGATCGCCCTCGGCCTAGCCCTTTCGGGCAATCAGAGCGTGTTCAGTCTCGTCATCCTCGCCTGGTCCACCCTGGCGGCC GCCTTTGCGCCCCTGTTGACGCTCTATGCCCTCCGCCGGCGCGTGTCGGAGCCTGTGGCCATCATGATGCTGGTCCTCGG TGTCAGTATCGCCCTGTTCTGGCGCTTTGGCCTCGGCTGGCATGAGAGCATCTATGAGGGCCTGCCGGGCATCCTCGTGC CGCTCATCATCGGTTGGTTCCTGTCGGAGCGCCGGGAAATTGCGGCCAGCCCGGAGCCCGCCGCCGAGACCAGCCCCAGC GCCGCAGAGTAA
Upstream 100 bases:
>100_bases TTGCCATCGCGGAGTTTGACCCGCGCGGCGAGCCTGAACAATCCGACCAGCCAGACCTTTTCGCAGGGCCCATGCCTGCC AGCCCGCAGGAGACTGCCTC
Downstream 100 bases:
>100_bases GTCTGCCCCTCCGCTGAAGAGGCGGTTGCGGCCTGTTCATCGCCATTCTCGTTTACTGGTCATCCTGCGCCTTCGGGCGC GGGAATGGCCGAAACTGTGT
Product: solute/sodium symporter (SSS) family protein
Products: NA
Alternate protein names: Proline permease 2 [H]
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MITAISFVLILLSFVVIGLASGRKATGKRKDYYLASSSVSPWLAGLSAVATNNSGYMFIGVIGFTYQTGLAAMWLMIGWI VGDFIGSSFIHKRLRQATAKTGEASFAGVIARWYGEKFGIWQKIAGVIMIVFLIAYAAAQISAGGKALEGVLGINPWTGA VMVAAMVLLYSIVGGIRASIWTDGAQSITMMFAMTILLIAAFAGVGGVSGALELWSAIPGFLDPFPDDLLFPGALGMGLF IVGWLFAGFSVVGQPHVMVRFMALDHDRNMGRARAWYYGYFTIFYLLATGVGMLSRLYLPDLADIDPELALPMMATELLP PVLVGVILAGIFAATMSTADSLVLSCSASFTHDLAPERLETPLILKTATAVSILIALGLALSGNQSVFSLVILAWSTLAA AFAPLLTLYALRRRVSEPVAIMMLVLGVSIALFWRFGLGWHESIYEGLPGILVPLIIGWFLSERREIAASPEPAAETSPS AAE
Sequences:
>Translated_483_residues MITAISFVLILLSFVVIGLASGRKATGKRKDYYLASSSVSPWLAGLSAVATNNSGYMFIGVIGFTYQTGLAAMWLMIGWI VGDFIGSSFIHKRLRQATAKTGEASFAGVIARWYGEKFGIWQKIAGVIMIVFLIAYAAAQISAGGKALEGVLGINPWTGA VMVAAMVLLYSIVGGIRASIWTDGAQSITMMFAMTILLIAAFAGVGGVSGALELWSAIPGFLDPFPDDLLFPGALGMGLF IVGWLFAGFSVVGQPHVMVRFMALDHDRNMGRARAWYYGYFTIFYLLATGVGMLSRLYLPDLADIDPELALPMMATELLP PVLVGVILAGIFAATMSTADSLVLSCSASFTHDLAPERLETPLILKTATAVSILIALGLALSGNQSVFSLVILAWSTLAA AFAPLLTLYALRRRVSEPVAIMMLVLGVSIALFWRFGLGWHESIYEGLPGILVPLIIGWFLSERREIAASPEPAAETSPS AAE >Mature_483_residues MITAISFVLILLSFVVIGLASGRKATGKRKDYYLASSSVSPWLAGLSAVATNNSGYMFIGVIGFTYQTGLAAMWLMIGWI VGDFIGSSFIHKRLRQATAKTGEASFAGVIARWYGEKFGIWQKIAGVIMIVFLIAYAAAQISAGGKALEGVLGINPWTGA VMVAAMVLLYSIVGGIRASIWTDGAQSITMMFAMTILLIAAFAGVGGVSGALELWSAIPGFLDPFPDDLLFPGALGMGLF IVGWLFAGFSVVGQPHVMVRFMALDHDRNMGRARAWYYGYFTIFYLLATGVGMLSRLYLPDLADIDPELALPMMATELLP PVLVGVILAGIFAATMSTADSLVLSCSASFTHDLAPERLETPLILKTATAVSILIALGLALSGNQSVFSLVILAWSTLAA AFAPLLTLYALRRRVSEPVAIMMLVLGVSIALFWRFGLGWHESIYEGLPGILVPLIIGWFLSERREIAASPEPAAETSPS AAE
Specific function: Catalyzes the sodium-dependent uptake of extracellular L-proline [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI310128183, Length=479, Percent_Identity=29.0187891440501, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI17941285, Length=397, Percent_Identity=26.9521410579345, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI206597487, Length=479, Percent_Identity=24.6346555323591, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI4507031, Length=337, Percent_Identity=25.2225519287834, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI4507033, Length=388, Percent_Identity=25.2577319587629, Blast_Score=67, Evalue=5e-11, Organism=Escherichia coli, GI1787251, Length=462, Percent_Identity=26.8398268398268, Blast_Score=143, Evalue=2e-35, Organism=Escherichia coli, GI87082237, Length=364, Percent_Identity=27.4725274725275, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1790503, Length=522, Percent_Identity=23.9463601532567, Blast_Score=86, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011851 - InterPro: IPR001734 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 51532; Mature: 51532
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITAISFVLILLSFVVIGLASGRKATGKRKDYYLASSSVSPWLAGLSAVATNNSGYMFIG CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHEECCCCEEEEE VIGFTYQTGLAAMWLMIGWIVGDFIGSSFIHKRLRQATAKTGEASFAGVIARWYGEKFGI EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCH WQKIAGVIMIVFLIAYAAAQISAGGKALEGVLGINPWTGAVMVAAMVLLYSIVGGIRASI HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH WTDGAQSITMMFAMTILLIAAFAGVGGVSGALELWSAIPGFLDPFPDDLLFPGALGMGLF HCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHCCCCCCHHCCCCHHHHHHH IVGWLFAGFSVVGQPHVMVRFMALDHDRNMGRARAWYYGYFTIFYLLATGVGMLSRLYLP HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DLADIDPELALPMMATELLPPVLVGVILAGIFAATMSTADSLVLSCSASFTHDLAPERLE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHC TPLILKTATAVSILIALGLALSGNQSVFSLVILAWSTLAAAFAPLLTLYALRRRVSEPVA CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH IMMLVLGVSIALFWRFGLGWHESIYEGLPGILVPLIIGWFLSERREIAASPEPAAETSPS HHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC AAE CCC >Mature Secondary Structure MITAISFVLILLSFVVIGLASGRKATGKRKDYYLASSSVSPWLAGLSAVATNNSGYMFIG CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHEECCCCEEEEE VIGFTYQTGLAAMWLMIGWIVGDFIGSSFIHKRLRQATAKTGEASFAGVIARWYGEKFGI EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCH WQKIAGVIMIVFLIAYAAAQISAGGKALEGVLGINPWTGAVMVAAMVLLYSIVGGIRASI HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH WTDGAQSITMMFAMTILLIAAFAGVGGVSGALELWSAIPGFLDPFPDDLLFPGALGMGLF HCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHCCCCCCHHCCCCHHHHHHH IVGWLFAGFSVVGQPHVMVRFMALDHDRNMGRARAWYYGYFTIFYLLATGVGMLSRLYLP HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DLADIDPELALPMMATELLPPVLVGVILAGIFAATMSTADSLVLSCSASFTHDLAPERLE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHC TPLILKTATAVSILIALGLALSGNQSVFSLVILAWSTLAAAFAPLLTLYALRRRVSEPVA CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH IMMLVLGVSIALFWRFGLGWHESIYEGLPGILVPLIIGWFLSERREIAASPEPAAETSPS HHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC AAE CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA