| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797441
Identifier: 114797441
GI number: 114797441
Start: 1611133
End: 1612254
Strand: Reverse
Name: 114797441
Synonym: HNE_1578
Alternate gene names: NA
Gene position: 1612254-1611133 (Counterclockwise)
Preceding gene: 114798017
Following gene: 114798228
Centisome position: 43.52
GC content: 52.85
Gene sequence:
>1122_bases ATGACGCCCCTTCTCAATCCAAGCGTCCTGGTTTTGGCGATTGGTGAGGCGCATCAACTGCTCCATATTCTTGGTCCAGC CAGAGAACTATTCCGCTCCGGGATCAAAACGGATATTCTTGTTGCAACGGACTGGCATGAACGCCTGATCGCCAGCCACG CCCCCGAACTGGCAAGCCAGATCGTTCGCGCGCCCCTGTTCAATAAACACAGGCCTATCTACCAGTGCCCGCCCCGGCTG CCAAACCTGCTTCTCAGCCTGATACGGATCTCTCAGTACGATGCGATCCTTACACCGGAGCGCACATCTACTGTATTGCG CAGGATTCTGGGAAAACGCTGCCCGTCACTGGTCCACATTCTCCATGGAGCCGGCGATCGCGCCCAGGGATATGAAGGCC GTATACGGTTGTTTGATCTTGTCTTTGTCGCCGGCAAGAAGGATTATGACGCTTTCCTGAATTACAAACTCGCGACCGCT GAGACATGCCATGTCATCGGGTATTGCAAGTTTGATGTTCTGCCAGAAACGCCCCCAAAATTCTTTGAAAATGATCTGCC GGTTGTGCTGTACAATCCGCACTTTGACACAAACCTTGGCTCATGGATCGCATTCGGTCCCGAACTATTGGAGCGATTTT CATCCACACCGGAATTTAACTTCATCATTGCGCCCCATCTGAGATTGCGGGGTAAAGGCCGCCGGCTATTTGACGAGCTG TCGCGCTCTTTCGTGCGGCCCAATCTCCGCTTTGATGGAGGCAGTCTGCACTCCATCAATATGGATTACACGAGGGCTGC CGACATCTATGTGGGCGATGTCAGCAGCCAGGTGTATGAATTTCTAAGGACGCCCAAACCCTGCGTATTCATAGATGTTC AGACTACGGATTGGAGTAACAACCCATTCTATCGCCACTGGACGTTCGGAAAGGTAGCGAAGTCTCCTGCGGAAACACTC GAATGTATCAAGTCTGCGCATGCAGATCATTCAGACTTCATGCCGGCTCAACAGGCCGGTTTCGCCGCAGCTATTGCCCC TGCCGAGACAACACCTTCTGCGCGCGCAGCTGAAATCATCCATCAGTTCCTGACGAAACATAAGCGTCAAAAGCGAAAGT AG
Upstream 100 bases:
>100_bases ATCAAAGGTCATCTCTGGGCTGAAGTTGATACAGTCGAAGATTTCAATGCGTTGAAAGAGATCGGATTTTGAAATCAGGA TGGAGACAGGCAATCCATCA
Downstream 100 bases:
>100_bases CACGCATCTCCCAATGGGGGAGTGCGCATCACACGATCGCGTCCCAATCGCAACTCAGGCGTGAGGCCGCATTGATGATA CCGACCATCGAATAGGTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MTPLLNPSVLVLAIGEAHQLLHILGPARELFRSGIKTDILVATDWHERLIASHAPELASQIVRAPLFNKHRPIYQCPPRL PNLLLSLIRISQYDAILTPERTSTVLRRILGKRCPSLVHILHGAGDRAQGYEGRIRLFDLVFVAGKKDYDAFLNYKLATA ETCHVIGYCKFDVLPETPPKFFENDLPVVLYNPHFDTNLGSWIAFGPELLERFSSTPEFNFIIAPHLRLRGKGRRLFDEL SRSFVRPNLRFDGGSLHSINMDYTRAADIYVGDVSSQVYEFLRTPKPCVFIDVQTTDWSNNPFYRHWTFGKVAKSPAETL ECIKSAHADHSDFMPAQQAGFAAAIAPAETTPSARAAEIIHQFLTKHKRQKRK
Sequences:
>Translated_373_residues MTPLLNPSVLVLAIGEAHQLLHILGPARELFRSGIKTDILVATDWHERLIASHAPELASQIVRAPLFNKHRPIYQCPPRL PNLLLSLIRISQYDAILTPERTSTVLRRILGKRCPSLVHILHGAGDRAQGYEGRIRLFDLVFVAGKKDYDAFLNYKLATA ETCHVIGYCKFDVLPETPPKFFENDLPVVLYNPHFDTNLGSWIAFGPELLERFSSTPEFNFIIAPHLRLRGKGRRLFDEL SRSFVRPNLRFDGGSLHSINMDYTRAADIYVGDVSSQVYEFLRTPKPCVFIDVQTTDWSNNPFYRHWTFGKVAKSPAETL ECIKSAHADHSDFMPAQQAGFAAAIAPAETTPSARAAEIIHQFLTKHKRQKRK >Mature_372_residues TPLLNPSVLVLAIGEAHQLLHILGPARELFRSGIKTDILVATDWHERLIASHAPELASQIVRAPLFNKHRPIYQCPPRLP NLLLSLIRISQYDAILTPERTSTVLRRILGKRCPSLVHILHGAGDRAQGYEGRIRLFDLVFVAGKKDYDAFLNYKLATAE TCHVIGYCKFDVLPETPPKFFENDLPVVLYNPHFDTNLGSWIAFGPELLERFSSTPEFNFIIAPHLRLRGKGRRLFDELS RSFVRPNLRFDGGSLHSINMDYTRAADIYVGDVSSQVYEFLRTPKPCVFIDVQTTDWSNNPFYRHWTFGKVAKSPAETLE CIKSAHADHSDFMPAQQAGFAAAIAPAETTPSARAAEIIHQFLTKHKRQKRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42220; Mature: 42089
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLLNPSVLVLAIGEAHQLLHILGPARELFRSGIKTDILVATDWHERLIASHAPELASQ CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCHHHHHH IVRAPLFNKHRPIYQCPPRLPNLLLSLIRISQYDAILTPERTSTVLRRILGKRCPSLVHI HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHCHHHHHH LHGAGDRAQGYEGRIRLFDLVFVAGKKDYDAFLNYKLATAETCHVIGYCKFDVLPETPPK HHCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHCEEEECCCEEEEEEEEEECCCCCCCHH FFENDLPVVLYNPHFDTNLGSWIAFGPELLERFSSTPEFNFIIAPHLRLRGKGRRLFDEL HHCCCCCEEEECCCCCCCCCCHHHCCHHHHHHHCCCCCEEEEEECCEEECCCCHHHHHHH SRSFVRPNLRFDGGSLHSINMDYTRAADIYVGDVSSQVYEFLRTPKPCVFIDVQTTDWSN HHHHCCCCCEECCCCEEEECCCCEEECEEEEECHHHHHHHHHCCCCCEEEEEEEECCCCC NPFYRHWTFGKVAKSPAETLECIKSAHADHSDFMPAQQAGFAAAIAPAETTPSARAAEII CCCEEEECHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHCCCEEEECCCCCCCCHHHHHHH HQFLTKHKRQKRK HHHHHHHHHHCCC >Mature Secondary Structure TPLLNPSVLVLAIGEAHQLLHILGPARELFRSGIKTDILVATDWHERLIASHAPELASQ CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCHHHHHH IVRAPLFNKHRPIYQCPPRLPNLLLSLIRISQYDAILTPERTSTVLRRILGKRCPSLVHI HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHCHHHHHH LHGAGDRAQGYEGRIRLFDLVFVAGKKDYDAFLNYKLATAETCHVIGYCKFDVLPETPPK HHCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHCEEEECCCEEEEEEEEEECCCCCCCHH FFENDLPVVLYNPHFDTNLGSWIAFGPELLERFSSTPEFNFIIAPHLRLRGKGRRLFDEL HHCCCCCEEEECCCCCCCCCCHHHCCHHHHHHHCCCCCEEEEEECCEEECCCCHHHHHHH SRSFVRPNLRFDGGSLHSINMDYTRAADIYVGDVSSQVYEFLRTPKPCVFIDVQTTDWSN HHHHCCCCCEECCCCEEEECCCCEEECEEEEECHHHHHHHHHCCCCCEEEEEEEECCCCC NPFYRHWTFGKVAKSPAETLECIKSAHADHSDFMPAQQAGFAAAIAPAETTPSARAAEII CCCEEEECHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHCCCEEEECCCCCCCCHHHHHHH HQFLTKHKRQKRK HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA