| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is 114797402
Identifier: 114797402
GI number: 114797402
Start: 3163770
End: 3165347
Strand: Direct
Name: 114797402
Synonym: HNE_3000
Alternate gene names: NA
Gene position: 3163770-3165347 (Clockwise)
Preceding gene: 114797530
Following gene: 114799457
Centisome position: 85.39
GC content: 63.05
Gene sequence:
>1578_bases ATGCACGATTCGACGTTGCTCGACCGCCATCAGACCTTTGAACGCCTGACACTGGCAGTCCTCGGGTTGCTCCTGATTCT CCGAATCGCAGCGGTCATCTCCACGCCGCTGGAGCTCTATGCGGACGAAGCCCAATACTGGCGCTGGGGGCAGTCGCTGG AGTGGGGCTATTATTCCAAGCCGCCGATGATCGCCTGGGTGATTCACCTGACGACCTCCATTTTCGGCACGCAGGAATGG ACTGTCCGCCTGGCGGCGCCCTTTCTGCACACGGCGGCAGCAGCGCTTATCTTCCTGACCGGACGCGCCATGCTGGACGC CAGGGCGGGTTTCTTTGCCGCCCTGCTCTACGCGCTGATGCCATCTGTCGTTCTCTCATCAAGCGTGCTGTCGACCGATG GCGTGCTGATGCCGTTCTGGTGCGCGGCCCTCTTTCTGCTGTGGCGCCTCAGGAGCGGAGAAGGCCTCTGGGTGTCGGCA GCCCTGCTTGGGGGCGCGATCGGCGCGGGCATGCTGTCAAAATACGCGATGATCTATTTCCTGATCGGCATCGCTCTGGC CAGCCTGATGGATGCGCCCACCCGCCGGGTGGTTCTTTCACCGCGCGGCGCGCTGGCCGGCGGAATTGCCGCGCTCATCA TGGCGCCGCATTTCGCCTGGAACGCGGCCAATGATTTTGCCACGGTCAGCCATACCGTCGACAACGCCAACCTTGGCGGC GAGCTGTTCAATCCTGAAAATGCGCTGAGCTGGTTTGGCGATCAGCTTGGCATGTTCGGCCCTGTGAGCTTTCTGGCATT GCTTACCGGCCTGTTTCTGTACCGGACACGGCGCGGCGAAGCGGCAGGCCCCGAACGTTGGCTGCTGTGCTTCATCCTGC CGGTTCTGATCTTCATCCTGTGTCAGGCGGTCCTGTCACGCGCCCATGCCAACTGGACGGCAACCGCCTATCCCGGCGCC GCGCTTCTGGTGGCGCTCTGGTTCAGCCGCGGCAAGGCGGTCACGCTTTGGGCGAGCCTCGGCGTCAATCTGCTGGTGGC GGCGCTGTTCATGGCCATGACATTGCTGCCACCGGCCGCAACTACGGATCTGGGGCTGGACAACGCCGCCAAGCGGACCC GCGGATGGGAGGCTTCGGCCCAGGAGGTGTTTGACGCGGCTGAGCGCCTTGGGGCAACGGCGGTGCTGGTTGATGAACGG GAAGTCTGGCATGGGCTGGATTTCTATGCCCGTGACCGGAGCCTGCCGCTCATTTCGTGGCGCCGATACCCCGGCCCCAA AAGCTTTTCGGAAAGGGTGCCGCTGGAAGGCGCAATCGCGGACAGGGTACTGATAGCGTCCCTGCATTCAGGCCTGCGCC CGCATCTGCGGAGTGATTTTGCGCGCTTCGAGCCGGCAGGCCAGGTCCGCATCGATCTTGGGACACGTGGCAATGGCTGC CCGATCACCCGCGTGTTTCAGCTGTATATCGGCGAAGGTTATAATCCACCCGAGCGGACCCAGGAATGGGAAAACCAGTT CATAGGGGAAATGGAGTTTCCCGAGCCGCCCTGCCCGACGGCGGCATATGACGGCTAA
Upstream 100 bases:
>100_bases CGCTGTTAATACCTGAAGTGCCCCTTCAAACAGCGTCGGCCTCTGTATTTGAGCCGTCGAAGCGGCCATAAGACGCGCAC AAAGCCTCTTGGAACCCGCC
Downstream 100 bases:
>100_bases GGGGCCAGCGCTCAGAGCGCTGGCGTGTCATTGCCCCAGACTTCCACAAGACGCTGATCGCGGCCGCAGGCTTCACGCTC GCTGGAATACTTTGACGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Dolichyl-Phosphate-Mannose-Protein Mannosyltransferase; Glycosyltransferase; Dolichyl-Phosphate Beta-D-Mannosyltransferase; Glycosyltransferase Family; Glycosyl Transferase; Family; 4-Amino-4-Deoxy-L-Arabinose Transferase; Glycosyltransferase Protein; Transmembrane Protein; Undecaprenyl-PhosphomannoseProtein Mannosyltransferase; Dolichol Monophosphate Mannose Synthase
Number of amino acids: Translated: 525; Mature: 525
Protein sequence:
>525_residues MHDSTLLDRHQTFERLTLAVLGLLLILRIAAVISTPLELYADEAQYWRWGQSLEWGYYSKPPMIAWVIHLTTSIFGTQEW TVRLAAPFLHTAAAALIFLTGRAMLDARAGFFAALLYALMPSVVLSSSVLSTDGVLMPFWCAALFLLWRLRSGEGLWVSA ALLGGAIGAGMLSKYAMIYFLIGIALASLMDAPTRRVVLSPRGALAGGIAALIMAPHFAWNAANDFATVSHTVDNANLGG ELFNPENALSWFGDQLGMFGPVSFLALLTGLFLYRTRRGEAAGPERWLLCFILPVLIFILCQAVLSRAHANWTATAYPGA ALLVALWFSRGKAVTLWASLGVNLLVAALFMAMTLLPPAATTDLGLDNAAKRTRGWEASAQEVFDAAERLGATAVLVDER EVWHGLDFYARDRSLPLISWRRYPGPKSFSERVPLEGAIADRVLIASLHSGLRPHLRSDFARFEPAGQVRIDLGTRGNGC PITRVFQLYIGEGYNPPERTQEWENQFIGEMEFPEPPCPTAAYDG
Sequences:
>Translated_525_residues MHDSTLLDRHQTFERLTLAVLGLLLILRIAAVISTPLELYADEAQYWRWGQSLEWGYYSKPPMIAWVIHLTTSIFGTQEW TVRLAAPFLHTAAAALIFLTGRAMLDARAGFFAALLYALMPSVVLSSSVLSTDGVLMPFWCAALFLLWRLRSGEGLWVSA ALLGGAIGAGMLSKYAMIYFLIGIALASLMDAPTRRVVLSPRGALAGGIAALIMAPHFAWNAANDFATVSHTVDNANLGG ELFNPENALSWFGDQLGMFGPVSFLALLTGLFLYRTRRGEAAGPERWLLCFILPVLIFILCQAVLSRAHANWTATAYPGA ALLVALWFSRGKAVTLWASLGVNLLVAALFMAMTLLPPAATTDLGLDNAAKRTRGWEASAQEVFDAAERLGATAVLVDER EVWHGLDFYARDRSLPLISWRRYPGPKSFSERVPLEGAIADRVLIASLHSGLRPHLRSDFARFEPAGQVRIDLGTRGNGC PITRVFQLYIGEGYNPPERTQEWENQFIGEMEFPEPPCPTAAYDG >Mature_525_residues MHDSTLLDRHQTFERLTLAVLGLLLILRIAAVISTPLELYADEAQYWRWGQSLEWGYYSKPPMIAWVIHLTTSIFGTQEW TVRLAAPFLHTAAAALIFLTGRAMLDARAGFFAALLYALMPSVVLSSSVLSTDGVLMPFWCAALFLLWRLRSGEGLWVSA ALLGGAIGAGMLSKYAMIYFLIGIALASLMDAPTRRVVLSPRGALAGGIAALIMAPHFAWNAANDFATVSHTVDNANLGG ELFNPENALSWFGDQLGMFGPVSFLALLTGLFLYRTRRGEAAGPERWLLCFILPVLIFILCQAVLSRAHANWTATAYPGA ALLVALWFSRGKAVTLWASLGVNLLVAALFMAMTLLPPAATTDLGLDNAAKRTRGWEASAQEVFDAAERLGATAVLVDER EVWHGLDFYARDRSLPLISWRRYPGPKSFSERVPLEGAIADRVLIASLHSGLRPHLRSDFARFEPAGQVRIDLGTRGNGC PITRVFQLYIGEGYNPPERTQEWENQFIGEMEFPEPPCPTAAYDG
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57575; Mature: 57575
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDSTLLDRHQTFERLTLAVLGLLLILRIAAVISTPLELYADEAQYWRWGQSLEWGYYSK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHCCCCCCCCCCCC PPMIAWVIHLTTSIFGTQEWTVRLAAPFLHTAAAALIFLTGRAMLDARAGFFAALLYALM CCHHHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PSVVLSSSVLSTDGVLMPFWCAALFLLWRLRSGEGLWVSAALLGGAIGAGMLSKYAMIYF HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH LIGIALASLMDAPTRRVVLSPRGALAGGIAALIMAPHFAWNAANDFATVSHTVDNANLGG HHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCHHCCCCCCCCHHHHHCCCCCCCCC ELFNPENALSWFGDQLGMFGPVSFLALLTGLFLYRTRRGEAAGPERWLLCFILPVLIFIL CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH CQAVLSRAHANWTATAYPGAALLVALWFSRGKAVTLWASLGVNLLVAALFMAMTLLPPAA HHHHHHHHCCCCEEECCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCC TTDLGLDNAAKRTRGWEASAQEVFDAAERLGATAVLVDEREVWHGLDFYARDRSLPLISW CCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCEEEEECCHHHHHCCHHHHCCCCCCEEEE RRYPGPKSFSERVPLEGAIADRVLIASLHSGLRPHLRSDFARFEPAGQVRIDLGTRGNGC CCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEECCCCCCC PITRVFQLYIGEGYNPPERTQEWENQFIGEMEFPEPPCPTAAYDG HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHDSTLLDRHQTFERLTLAVLGLLLILRIAAVISTPLELYADEAQYWRWGQSLEWGYYSK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHCCCCCCCCCCCC PPMIAWVIHLTTSIFGTQEWTVRLAAPFLHTAAAALIFLTGRAMLDARAGFFAALLYALM CCHHHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PSVVLSSSVLSTDGVLMPFWCAALFLLWRLRSGEGLWVSAALLGGAIGAGMLSKYAMIYF HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH LIGIALASLMDAPTRRVVLSPRGALAGGIAALIMAPHFAWNAANDFATVSHTVDNANLGG HHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCHHCCCCCCCCHHHHHCCCCCCCCC ELFNPENALSWFGDQLGMFGPVSFLALLTGLFLYRTRRGEAAGPERWLLCFILPVLIFIL CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH CQAVLSRAHANWTATAYPGAALLVALWFSRGKAVTLWASLGVNLLVAALFMAMTLLPPAA HHHHHHHHCCCCEEECCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCC TTDLGLDNAAKRTRGWEASAQEVFDAAERLGATAVLVDEREVWHGLDFYARDRSLPLISW CCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCEEEEECCHHHHHCCHHHHCCCCCCEEEE RRYPGPKSFSERVPLEGAIADRVLIASLHSGLRPHLRSDFARFEPAGQVRIDLGTRGNGC CCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEECCCCCCC PITRVFQLYIGEGYNPPERTQEWENQFIGEMEFPEPPCPTAAYDG HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA