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The map label for this gene is yaiC [C]

Identifier: 114797530

GI number: 114797530

Start: 3156519

End: 3158411

Strand: Direct

Name: yaiC [C]

Synonym: HNE_2996

Alternate gene names: 114797530

Gene position: 3156519-3158411 (Clockwise)

Preceding gene: 114799863

Following gene: 114797402

Centisome position: 85.2

GC content: 58.64

Gene sequence:

>1893_bases
GTGCCGATAAGGCGGAGAATTCCCGCATTAAAACAACGTGATCTTTACCAGATTGGCGTAAACCAAGAGTTGGAGCTGAT
ACGGTTTGGGATTATGTGGCTGGGTATCAAGTCAGGCCGTTGGCGGGCGGCCGTCTGGGCGATGCTCAGTTGTCTGTTGC
TGCCCTCGCTTGCCATAGCGGGCGAGCCGCCGCGCAGTATCAATCTCGCGAGCCTGCCCGCAGACGCCGCATTTACACCC
GCCCTGGAGATCGCCACGGGAATTGACCCGTCAGCCTTGCCCGAAGACGTTATCGCTTCTGCGAACGAGCTCGGCTTCAA
ATCTGCGGGCAAGAAGACGCCTCAGTTCTCGCCACGTGAGGGCGATGTGTGGCTGCGCTTTACACTGACAAATCCGAGCC
TGGATGTGCAATCTGCCAAGCTGGCACTGCGGTTTCCCTATCTGGAGCGTACCGATCTGTTTGAGCGGCGCGCCGATGGC
AGCCTGCATCACAGCATGGCGGGATCGGCTGTTCCGATCACCGGCGCTGCCATCGCCGCAGCCTATCCCGCTTATCACCT
GCATGTAGCCCCCAGCGAAACGCGGGAATATTTCATCCGCATACGAAGCTCATCCCTGATCCTGCTGCCCGTGACGATTG
CCTCTGAAGCGGCATTCGCCCAGCGCATGACGATGGAAACGCTGGTGTGGAGCCTGATTGTTGGCGCTGCGCTGGCTTTT
GCGATCTATGCCGCCTCGATGTCGTTTACAACGGCGAACGGGGCCTTCCGAATCTATATCTGCTTTGCCTTGTCTGCTGC
GCTCTATATTCTTCTTTCGTCAGGTTTGATGAATGCGCTGCTGGGAACGCATGTGCACTTCAACTTTGCCCGGACGGTCT
TTTTCACCCAAGCCATGGTGATGGCATTCGGCACAATGTTCATCATGGTGTTTCTCGACATGGAGAAACAGGCGCCGCGC
CTTTACCGCATCTTCTACCTGATTGCCTTCATCAGCGTACTGACCGGGATCAGCTTCCTGCTGCCGGCCTGGATTGGCCA
GCTGAGCTTTGTCATTGCCACGGGGCTTGGTCCGATTGTCGTGGTGGCCGGGCTTGCGCTGATGTCAGCCAGCGGTGTCT
CCGGCGCCCGCAGCGCGCTGGTTGCCTGGCTGCCTTGTCTGCTGGCTACCTTGTGGATTTACCTGCGCATCTTCGATGTG
ACGCCCTATTTGCCGATCAATCATTTCCTGCTGCCGCTCGCCTTTGCGTTCACGCTGGCTTATCTGAGCGCGGTGCTGGG
TGGACAGGTGCGTCAGGCGGAATTCTGGGCGAATACCGACGCGATGACCGGCCTTGGAAATCGCCGCCTGCTTGACCGGA
TCTGCGATCTGGAAAACCGGCAGACGAGTGAGCGTTACGCAACCGCCGTCGCGATCGACCTGGATAATTTCAAGCCGGTG
AATGACACGTTTGGCCATGCCGCGGGCGATGCTGTGCTCGTCGCCATGGCAGAGAAACTCCGCGCGCATTTTGGCGGGCG
GGGCGATATCTTCCGGGTGGGCGGGGATGAATTCCTGATCCTTGGATACCATTGGCAAAGCCGGATGGACATCATCACCC
AGGCGAATGCGTTCCTGCAAGCCGCCCTCACGCCGCTGCAGTTTGAAAACAATTACATCTCTGTGGGCGCTAGCGTGGGA
ATTGCGTTCCTCGATCATCGCACCGGCTTTTCAGGCATGCTGCGCCAGGCCGATGCCGAACTTTACCATGTAAAGTCTGC
CGGGCGGGGCGGCATACGCATTTCCGATCAGCGCCAGCGCGACCGCCGGAGCAGTGAGCCGGTCGTCTTTGCAGAAAATG
ATGATACCGAAGAACGCGTCGCCAAGATGTTCGGTACATCCCAGCGCCGCTGA

Upstream 100 bases:

>100_bases
GCTATCGTCTCCGCGGCCAGCCACCTGTCTCCGGGTAAAAGCCTCTAGCCCGGGCCGTTTGCCGGATCTGTAGTAGGTGG
TGCAGCTGCGCTGAGTATAA

Downstream 100 bases:

>100_bases
TTGCGGGGCCGGCGGCTAGACGAGTATCTCGTAGAGATCGGTTCTCCGATCACGGAAGAAGCCCCAGGCGGCTCTTGCCC
GGTCGATATGCTCCAGATCG

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 630; Mature: 629

Protein sequence:

>630_residues
MPIRRRIPALKQRDLYQIGVNQELELIRFGIMWLGIKSGRWRAAVWAMLSCLLLPSLAIAGEPPRSINLASLPADAAFTP
ALEIATGIDPSALPEDVIASANELGFKSAGKKTPQFSPREGDVWLRFTLTNPSLDVQSAKLALRFPYLERTDLFERRADG
SLHHSMAGSAVPITGAAIAAAYPAYHLHVAPSETREYFIRIRSSSLILLPVTIASEAAFAQRMTMETLVWSLIVGAALAF
AIYAASMSFTTANGAFRIYICFALSAALYILLSSGLMNALLGTHVHFNFARTVFFTQAMVMAFGTMFIMVFLDMEKQAPR
LYRIFYLIAFISVLTGISFLLPAWIGQLSFVIATGLGPIVVVAGLALMSASGVSGARSALVAWLPCLLATLWIYLRIFDV
TPYLPINHFLLPLAFAFTLAYLSAVLGGQVRQAEFWANTDAMTGLGNRRLLDRICDLENRQTSERYATAVAIDLDNFKPV
NDTFGHAAGDAVLVAMAEKLRAHFGGRGDIFRVGGDEFLILGYHWQSRMDIITQANAFLQAALTPLQFENNYISVGASVG
IAFLDHRTGFSGMLRQADAELYHVKSAGRGGIRISDQRQRDRRSSEPVVFAENDDTEERVAKMFGTSQRR

Sequences:

>Translated_630_residues
MPIRRRIPALKQRDLYQIGVNQELELIRFGIMWLGIKSGRWRAAVWAMLSCLLLPSLAIAGEPPRSINLASLPADAAFTP
ALEIATGIDPSALPEDVIASANELGFKSAGKKTPQFSPREGDVWLRFTLTNPSLDVQSAKLALRFPYLERTDLFERRADG
SLHHSMAGSAVPITGAAIAAAYPAYHLHVAPSETREYFIRIRSSSLILLPVTIASEAAFAQRMTMETLVWSLIVGAALAF
AIYAASMSFTTANGAFRIYICFALSAALYILLSSGLMNALLGTHVHFNFARTVFFTQAMVMAFGTMFIMVFLDMEKQAPR
LYRIFYLIAFISVLTGISFLLPAWIGQLSFVIATGLGPIVVVAGLALMSASGVSGARSALVAWLPCLLATLWIYLRIFDV
TPYLPINHFLLPLAFAFTLAYLSAVLGGQVRQAEFWANTDAMTGLGNRRLLDRICDLENRQTSERYATAVAIDLDNFKPV
NDTFGHAAGDAVLVAMAEKLRAHFGGRGDIFRVGGDEFLILGYHWQSRMDIITQANAFLQAALTPLQFENNYISVGASVG
IAFLDHRTGFSGMLRQADAELYHVKSAGRGGIRISDQRQRDRRSSEPVVFAENDDTEERVAKMFGTSQRR
>Mature_629_residues
PIRRRIPALKQRDLYQIGVNQELELIRFGIMWLGIKSGRWRAAVWAMLSCLLLPSLAIAGEPPRSINLASLPADAAFTPA
LEIATGIDPSALPEDVIASANELGFKSAGKKTPQFSPREGDVWLRFTLTNPSLDVQSAKLALRFPYLERTDLFERRADGS
LHHSMAGSAVPITGAAIAAAYPAYHLHVAPSETREYFIRIRSSSLILLPVTIASEAAFAQRMTMETLVWSLIVGAALAFA
IYAASMSFTTANGAFRIYICFALSAALYILLSSGLMNALLGTHVHFNFARTVFFTQAMVMAFGTMFIMVFLDMEKQAPRL
YRIFYLIAFISVLTGISFLLPAWIGQLSFVIATGLGPIVVVAGLALMSASGVSGARSALVAWLPCLLATLWIYLRIFDVT
PYLPINHFLLPLAFAFTLAYLSAVLGGQVRQAEFWANTDAMTGLGNRRLLDRICDLENRQTSERYATAVAIDLDNFKPVN
DTFGHAAGDAVLVAMAEKLRAHFGGRGDIFRVGGDEFLILGYHWQSRMDIITQANAFLQAALTPLQFENNYISVGASVGI
AFLDHRTGFSGMLRQADAELYHVKSAGRGGIRISDQRQRDRRSSEPVVFAENDDTEERVAKMFGTSQRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MHYT domain [H]

Homologues:

Organism=Escherichia coli, GI1786584, Length=254, Percent_Identity=29.1338582677165, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1788956, Length=149, Percent_Identity=34.2281879194631, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI1787541, Length=155, Percent_Identity=32.9032258064516, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1788381, Length=178, Percent_Identity=34.8314606741573, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1787802, Length=207, Percent_Identity=25.1207729468599, Blast_Score=70, Evalue=6e-13,
Organism=Escherichia coli, GI87081881, Length=166, Percent_Identity=29.5180722891566, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI145693134, Length=160, Percent_Identity=29.375, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1787816, Length=193, Percent_Identity=27.979274611399, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI87081977, Length=152, Percent_Identity=32.8947368421053, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]

EC number: NA

Molecular weight: Translated: 69230; Mature: 69099

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIRRRIPALKQRDLYQIGVNQELELIRFGIMWLGIKSGRWRAAVWAMLSCLLLPSLAIA
CCCHHCCCHHHCCCCEEECCCCCHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHC
GEPPRSINLASLPADAAFTPALEIATGIDPSALPEDVIASANELGFKSAGKKTPQFSPRE
CCCCCCCEEECCCCCCCCCCHHHHHCCCCCCCCCHHHHHCCHHCCCCCCCCCCCCCCCCC
GDVWLRFTLTNPSLDVQSAKLALRFPYLERTDLFERRADGSLHHSMAGSAVPITGAAIAA
CCEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHH
AYPAYHLHVAPSETREYFIRIRSSSLILLPVTIASEAAFAQRMTMETLVWSLIVGAALAF
HCCEEEEEECCCHHHEEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIYAASMSFTTANGAFRIYICFALSAALYILLSSGLMNALLGTHVHFNFARTVFFTQAMV
HHHHHHCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAFGTMFIMVFLDMEKQAPRLYRIFYLIAFISVLTGISFLLPAWIGQLSFVIATGLGPIV
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VVAGLALMSASGVSGARSALVAWLPCLLATLWIYLRIFDVTPYLPINHFLLPLAFAFTLA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
YLSAVLGGQVRQAEFWANTDAMTGLGNRRLLDRICDLENRQTSERYATAVAIDLDNFKPV
HHHHHHCCCCEEHHHHCCCCHHCCCCCHHHHHHHHCCCCCCCHHHHEEEEEEECCCCCCC
NDTFGHAAGDAVLVAMAEKLRAHFGGRGDIFRVGGDEFLILGYHWQSRMDIITQANAFLQ
CHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEEECCCHHHHHHHHHHHHH
AALTPLQFENNYISVGASVGIAFLDHRTGFSGMLRQADAELYHVKSAGRGGIRISDQRQR
HHCCCEEECCCEEEECCHHCEEEEECCCCHHHHHHHHCCCEEEEECCCCCCCEECCHHHH
DRRSSEPVVFAENDDTEERVAKMFGTSQRR
HHCCCCCEEEECCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PIRRRIPALKQRDLYQIGVNQELELIRFGIMWLGIKSGRWRAAVWAMLSCLLLPSLAIA
CCHHCCCHHHCCCCEEECCCCCHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHC
GEPPRSINLASLPADAAFTPALEIATGIDPSALPEDVIASANELGFKSAGKKTPQFSPRE
CCCCCCCEEECCCCCCCCCCHHHHHCCCCCCCCCHHHHHCCHHCCCCCCCCCCCCCCCCC
GDVWLRFTLTNPSLDVQSAKLALRFPYLERTDLFERRADGSLHHSMAGSAVPITGAAIAA
CCEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHH
AYPAYHLHVAPSETREYFIRIRSSSLILLPVTIASEAAFAQRMTMETLVWSLIVGAALAF
HCCEEEEEECCCHHHEEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIYAASMSFTTANGAFRIYICFALSAALYILLSSGLMNALLGTHVHFNFARTVFFTQAMV
HHHHHHCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAFGTMFIMVFLDMEKQAPRLYRIFYLIAFISVLTGISFLLPAWIGQLSFVIATGLGPIV
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VVAGLALMSASGVSGARSALVAWLPCLLATLWIYLRIFDVTPYLPINHFLLPLAFAFTLA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
YLSAVLGGQVRQAEFWANTDAMTGLGNRRLLDRICDLENRQTSERYATAVAIDLDNFKPV
HHHHHHCCCCEEHHHHCCCCHHCCCCCHHHHHHHHCCCCCCCHHHHEEEEEEECCCCCCC
NDTFGHAAGDAVLVAMAEKLRAHFGGRGDIFRVGGDEFLILGYHWQSRMDIITQANAFLQ
CHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEEECCCHHHHHHHHHHHHH
AALTPLQFENNYISVGASVGIAFLDHRTGFSGMLRQADAELYHVKSAGRGGIRISDQRQR
HHCCCEEECCCEEEECCHHCEEEEECCCCHHHHHHHHCCCEEEEECCCCCCCEECCHHHH
DRRSSEPVVFAENDDTEERVAKMFGTSQRR
HHCCCCCEEEECCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]