| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is purL [H]
Identifier: 114797329
GI number: 114797329
Start: 2010803
End: 2013064
Strand: Direct
Name: purL [H]
Synonym: HNE_1942
Alternate gene names: 114797329
Gene position: 2010803-2013064 (Clockwise)
Preceding gene: 114798369
Following gene: 114799421
Centisome position: 54.27
GC content: 62.47
Gene sequence:
>2262_bases ATGACCGATACTGCCGCCATTCTCTCCCATCTCACAGCCGAGCAGGACGCCGCCTCCGGTGTCGGGCACGGCATCAAGGC CGATGAATGGGAACGCCTGGTCAGCCGCCTGGGCCGTAATCCCAATCTGGTGGAACTCGGCATCTATTCGGTGATGTGGT CAGAGCACTGCTCCTACAAATCCTCCCGCCGCCACTTGTCGAAATTCCCGACCAAAGGCCCCCGCGTCATCCAGGGGCCG GGCGAAAACGCCGGCGTCATCGACATCGGCGATGGCCAGGCCGCCATCTTCAAGATGGAGAGCCACAACCACCCCTCTTA CATCGAGCCGTATCAAGGCGCGGCGACCGGCGTCGGCGGCATCCTGCGCGACGTCTTCACGATGGGCGCCCGGCCCGTTG CCCTCGTCAACGCCCTGCGCTTCGGTGACCCCAGCCATCCGAAAACCCGCCAGCTTGTGGCAGGTGTCGTCGCTGGCATC GGTGGCTATGGCAACTGTGTCGGCGTGCCCACCGTTGCCGGTGAAACCCAGTTCGACGAAGGCTATAACGGCAACATCCT CGTCAATGCGATGGCTGTTGGCCTCGCCGATCAGGACAAGATCTTCTACGCCCGCGGCGCCCTGCCCGGCCTGCAGATCC TTTATGTCGGTTCCAAGACGGGCCGCGACGGCATCCACGGCGCCACCATGGCCTCGGCAGAATTCACCGAAGGCGAGGAA GACAACCGCCCCACGGTCCAGGTCGGCGACCCCTTCACGGAAAAACTGCTGATCGAAGCCTGCCTCGAATTGATGGCCAC CGACGCCATCCAGTCCATCCAGGACATGGGCGCTGCTGGCCTCACCTCCTCCTCGGTCGAAATGGCTGATAAAGGCGGCG TCGGCATCGAGATGGATCTCGACAAGGTGCCCCAGCGCGAAACCGGCATGACGGCCTATGAAATCATGCTGTCGGAAAGC CAGGAGCGTATGCTGATGATCCTCAAGCCCGGCAAGGAAGCCGTGGCCAAGAAGATCTTCGACAAATGGGACCTCGACGC CGAAGTGATCGGCGTGACCACAGACTCCGGACGCCTTGTACTCAAACAGTTCGGCGAAGTGGTGTGCGATATTCCGGTCG CGCCGCTCGGCGAAGACGCGCCCAACTATGACCGTCCGTGGACGGAGCCGCCGAAACGCCCGGATTTCGACATTTCAAAA CATCCTGCCCCGGCGAACTATGCCGAAGTGCTGACGAAGCTGATGTCGACCCCCGACATGGCCTCCAAACGCTGGGTCTG GGAACAGTATGACCGGCACGTGATGAACGATACGATCGACTCGTCACAGTCGGGCGGCGACGCCGCTATCGTGCGCGTTC ACGGCACCAACAAGGCCCTCGCCATCTGTTCGGACTGCAACCCCCATTACGTTGCTGCCGACCCGTATGAAGGCGGCAAG CAGGCCGTGGCCGAAGCCTACCGCAACCTCTCCGCCGTCGGCGCCACGCCGATTGCGATCACGGACAACCTCAACTTCGG CAACCCCGAAAAGCCCGCCACAATGGGCTATATCGTCAAGGCCATCGAAGGCATGGCCGAAGCGTGCCGGGTGCTGAACT TCCCGGTCGTCTCGGGCAACGTCTCGCTCTACAACGAGACCGATGGCAAGGCCATTCCGCCCACCCCCGTCGTCGGCGGC GTCGGCCTGATCGACGACCTCTCCAAAATTGCCACCCTGAAAGGCGCCCAGCCGGGCGACGCGCTGATTATCATTGGCGA AAACGCAGCTGACTTTGGCGCCTCGCTCTATGCCCGCAAATGGCTTGGCCTGAAGGGCGACGACCTCGGCCCGCCCCCGC CGGTTGATCTCGAAGACGAAATCCAGACCTCGGCCATCGTCCGCGAGCTGATTGCCAAGGGACTGGTCCACGCAGTCCAC GACATCAGCGATGGCGGCCTGGCAGTCGCCGCTGCTGAAATGGCGCTGGCCGGCAATGTCGGCATCATGCTCGACGCGCA GGCCGACCGCCTAGGCAGCCTCAGCCCACTGGCATACCTCTTCAGCGAAACGCAGGGCCGCTACCTCGTTGCCGCAAAGA ATGAAGACGAAGTGTTCGACCTGCTCGGCGACATCCCGGCCCTCTTTGCAGGCACAGTGGAAAATACCGGCGCCATCACC TTGATCCATGATCTGCGCAAGAGCGAAAAAACTGTCCTGCCGCTGCAGGATCTCCGCGCAGCCCATGAAGGCTGGCTGCC CGGCTACATGAACGCTGTTTGA
Upstream 100 bases:
>100_bases TTCCCTGCCCTCGCATGCTGCGCTGGATGCGTTGCTGGCAGTTGAACAGCCGGGCAAACCGGCCTAGCGCTGCGCCAAAT CTCAAACACGGGCTGATGTG
Downstream 100 bases:
>100_bases AGCATCACACAAATGACGCCCCCTCCCGGATAAGCGGAAGGGGGCGCCCTTTTGTCAGCTAAGCCTGATCAGGATCTGAT TAGAACTTGTAGCCAACACC
Product: phosphoribosylformylglycinamidine synthase II
Products: NA
Alternate protein names: Phosphoribosylformylglycinamidine synthase II; FGAM synthase II [H]
Number of amino acids: Translated: 753; Mature: 752
Protein sequence:
>753_residues MTDTAAILSHLTAEQDAASGVGHGIKADEWERLVSRLGRNPNLVELGIYSVMWSEHCSYKSSRRHLSKFPTKGPRVIQGP GENAGVIDIGDGQAAIFKMESHNHPSYIEPYQGAATGVGGILRDVFTMGARPVALVNALRFGDPSHPKTRQLVAGVVAGI GGYGNCVGVPTVAGETQFDEGYNGNILVNAMAVGLADQDKIFYARGALPGLQILYVGSKTGRDGIHGATMASAEFTEGEE DNRPTVQVGDPFTEKLLIEACLELMATDAIQSIQDMGAAGLTSSSVEMADKGGVGIEMDLDKVPQRETGMTAYEIMLSES QERMLMILKPGKEAVAKKIFDKWDLDAEVIGVTTDSGRLVLKQFGEVVCDIPVAPLGEDAPNYDRPWTEPPKRPDFDISK HPAPANYAEVLTKLMSTPDMASKRWVWEQYDRHVMNDTIDSSQSGGDAAIVRVHGTNKALAICSDCNPHYVAADPYEGGK QAVAEAYRNLSAVGATPIAITDNLNFGNPEKPATMGYIVKAIEGMAEACRVLNFPVVSGNVSLYNETDGKAIPPTPVVGG VGLIDDLSKIATLKGAQPGDALIIIGENAADFGASLYARKWLGLKGDDLGPPPPVDLEDEIQTSAIVRELIAKGLVHAVH DISDGGLAVAAAEMALAGNVGIMLDAQADRLGSLSPLAYLFSETQGRYLVAAKNEDEVFDLLGDIPALFAGTVENTGAIT LIHDLRKSEKTVLPLQDLRAAHEGWLPGYMNAV
Sequences:
>Translated_753_residues MTDTAAILSHLTAEQDAASGVGHGIKADEWERLVSRLGRNPNLVELGIYSVMWSEHCSYKSSRRHLSKFPTKGPRVIQGP GENAGVIDIGDGQAAIFKMESHNHPSYIEPYQGAATGVGGILRDVFTMGARPVALVNALRFGDPSHPKTRQLVAGVVAGI GGYGNCVGVPTVAGETQFDEGYNGNILVNAMAVGLADQDKIFYARGALPGLQILYVGSKTGRDGIHGATMASAEFTEGEE DNRPTVQVGDPFTEKLLIEACLELMATDAIQSIQDMGAAGLTSSSVEMADKGGVGIEMDLDKVPQRETGMTAYEIMLSES QERMLMILKPGKEAVAKKIFDKWDLDAEVIGVTTDSGRLVLKQFGEVVCDIPVAPLGEDAPNYDRPWTEPPKRPDFDISK HPAPANYAEVLTKLMSTPDMASKRWVWEQYDRHVMNDTIDSSQSGGDAAIVRVHGTNKALAICSDCNPHYVAADPYEGGK QAVAEAYRNLSAVGATPIAITDNLNFGNPEKPATMGYIVKAIEGMAEACRVLNFPVVSGNVSLYNETDGKAIPPTPVVGG VGLIDDLSKIATLKGAQPGDALIIIGENAADFGASLYARKWLGLKGDDLGPPPPVDLEDEIQTSAIVRELIAKGLVHAVH DISDGGLAVAAAEMALAGNVGIMLDAQADRLGSLSPLAYLFSETQGRYLVAAKNEDEVFDLLGDIPALFAGTVENTGAIT LIHDLRKSEKTVLPLQDLRAAHEGWLPGYMNAV >Mature_752_residues TDTAAILSHLTAEQDAASGVGHGIKADEWERLVSRLGRNPNLVELGIYSVMWSEHCSYKSSRRHLSKFPTKGPRVIQGPG ENAGVIDIGDGQAAIFKMESHNHPSYIEPYQGAATGVGGILRDVFTMGARPVALVNALRFGDPSHPKTRQLVAGVVAGIG GYGNCVGVPTVAGETQFDEGYNGNILVNAMAVGLADQDKIFYARGALPGLQILYVGSKTGRDGIHGATMASAEFTEGEED NRPTVQVGDPFTEKLLIEACLELMATDAIQSIQDMGAAGLTSSSVEMADKGGVGIEMDLDKVPQRETGMTAYEIMLSESQ ERMLMILKPGKEAVAKKIFDKWDLDAEVIGVTTDSGRLVLKQFGEVVCDIPVAPLGEDAPNYDRPWTEPPKRPDFDISKH PAPANYAEVLTKLMSTPDMASKRWVWEQYDRHVMNDTIDSSQSGGDAAIVRVHGTNKALAICSDCNPHYVAADPYEGGKQ AVAEAYRNLSAVGATPIAITDNLNFGNPEKPATMGYIVKAIEGMAEACRVLNFPVVSGNVSLYNETDGKAIPPTPVVGGV GLIDDLSKIATLKGAQPGDALIIIGENAADFGASLYARKWLGLKGDDLGPPPPVDLEDEIQTSAIVRELIAKGLVHAVHD ISDGGLAVAAAEMALAGNVGIMLDAQADRLGSLSPLAYLFSETQGRYLVAAKNEDEVFDLLGDIPALFAGTVENTGAITL IHDLRKSEKTVLPLQDLRAAHEGWLPGYMNAV
Specific function: Unknown
COG id: COG0046
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGAMS family [H]
Homologues:
Organism=Homo sapiens, GI31657129, Length=669, Percent_Identity=27.0553064275037, Blast_Score=109, Evalue=1e-23, Organism=Escherichia coli, GI48994899, Length=779, Percent_Identity=26.0590500641849, Blast_Score=130, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6321498, Length=793, Percent_Identity=23.9596469104666, Blast_Score=120, Evalue=8e-28, Organism=Drosophila melanogaster, GI24582111, Length=750, Percent_Identity=26.1333333333333, Blast_Score=116, Evalue=6e-26, Organism=Drosophila melanogaster, GI24582109, Length=750, Percent_Identity=26.1333333333333, Blast_Score=116, Evalue=6e-26, Organism=Drosophila melanogaster, GI17137292, Length=750, Percent_Identity=26.1333333333333, Blast_Score=116, Evalue=6e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR010074 - InterPro: IPR016188 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =6.3.5.3 [H]
Molecular weight: Translated: 80141; Mature: 80009
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTAAILSHLTAEQDAASGVGHGIKADEWERLVSRLGRNPNLVELGIYSVMWSEHCSYK CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCHH SSRRHLSKFPTKGPRVIQGPGENAGVIDIGDGQAAIFKMESHNHPSYIEPYQGAATGVGG HHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHH ILRDVFTMGARPVALVNALRFGDPSHPKTRQLVAGVVAGIGGYGNCVGVPTVAGETQFDE HHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC GYNGNILVNAMAVGLADQDKIFYARGALPGLQILYVGSKTGRDGIHGATMASAEFTEGEE CCCCCEEEEEEEECCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCEECCCCCCCCCC DNRPTVQVGDPFTEKLLIEACLELMATDAIQSIQDMGAAGLTSSSVEMADKGGVGIEMDL CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCEEEECH DKVPQRETGMTAYEIMLSESQERMLMILKPGKEAVAKKIFDKWDLDAEVIGVTTDSGRLV HHCCCCCCCCEEEEHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCHH LKQFGEVVCDIPVAPLGEDAPNYDRPWTEPPKRPDFDISKHPAPANYAEVLTKLMSTPDM HHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC ASKRWVWEQYDRHVMNDTIDSSQSGGDAAIVRVHGTNKALAICSDCNPHYVAADPYEGGK HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCEEECCCCCCHH QAVAEAYRNLSAVGATPIAITDNLNFGNPEKPATMGYIVKAIEGMAEACRVLNFPVVSGN HHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECC VSLYNETDGKAIPPTPVVGGVGLIDDLSKIATLKGAQPGDALIIIGENAADFGASLYARK EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHH WLGLKGDDLGPPPPVDLEDEIQTSAIVRELIAKGLVHAVHDISDGGLAVAAAEMALAGNV HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCC GIMLDAQADRLGSLSPLAYLFSETQGRYLVAAKNEDEVFDLLGDIPALFAGTVENTGAIT EEEEECCHHHCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHCHHHHHHCCCCCCCCEE LIHDLRKSEKTVLPLQDLRAAHEGWLPGYMNAV EEEHHHHCCCCCCCHHHHHHHHCCCCCCHHCCC >Mature Secondary Structure TDTAAILSHLTAEQDAASGVGHGIKADEWERLVSRLGRNPNLVELGIYSVMWSEHCSYK CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCHH SSRRHLSKFPTKGPRVIQGPGENAGVIDIGDGQAAIFKMESHNHPSYIEPYQGAATGVGG HHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHH ILRDVFTMGARPVALVNALRFGDPSHPKTRQLVAGVVAGIGGYGNCVGVPTVAGETQFDE HHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC GYNGNILVNAMAVGLADQDKIFYARGALPGLQILYVGSKTGRDGIHGATMASAEFTEGEE CCCCCEEEEEEEECCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCEECCCCCCCCCC DNRPTVQVGDPFTEKLLIEACLELMATDAIQSIQDMGAAGLTSSSVEMADKGGVGIEMDL CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCEEEECH DKVPQRETGMTAYEIMLSESQERMLMILKPGKEAVAKKIFDKWDLDAEVIGVTTDSGRLV HHCCCCCCCCEEEEHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCHH LKQFGEVVCDIPVAPLGEDAPNYDRPWTEPPKRPDFDISKHPAPANYAEVLTKLMSTPDM HHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC ASKRWVWEQYDRHVMNDTIDSSQSGGDAAIVRVHGTNKALAICSDCNPHYVAADPYEGGK HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCEEECCCCCCHH QAVAEAYRNLSAVGATPIAITDNLNFGNPEKPATMGYIVKAIEGMAEACRVLNFPVVSGN HHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECC VSLYNETDGKAIPPTPVVGGVGLIDDLSKIATLKGAQPGDALIIIGENAADFGASLYARK EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHH WLGLKGDDLGPPPPVDLEDEIQTSAIVRELIAKGLVHAVHDISDGGLAVAAAEMALAGNV HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCC GIMLDAQADRLGSLSPLAYLFSETQGRYLVAAKNEDEVFDLLGDIPALFAGTVENTGAIT EEEEECCHHHCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHCHHHHHHCCCCCCCCEE LIHDLRKSEKTVLPLQDLRAAHEGWLPGYMNAV EEEHHHHCCCCCCCHHHHHHHHCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11259647 [H]