| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is amn [H]
Identifier: 114797261
GI number: 114797261
Start: 1326469
End: 1327929
Strand: Direct
Name: amn [H]
Synonym: HNE_1294
Alternate gene names: 114797261
Gene position: 1326469-1327929 (Clockwise)
Preceding gene: 114800303
Following gene: 114798713
Centisome position: 35.8
GC content: 63.04
Gene sequence:
>1461_bases ATGGGTGCCATGTCGAAACACACGAAACCTGAAACCGTTATCGAAGCGCTTGAGGCGCTGTATAACGAGGCCGTTGAGGC CCTTTCCAACTCGCTGAACAGCTTCCTGCATGACGGCACGCCGCCAGACCCGCGCCTGCGGGACGAGGGGGCGTTCTGCT ATCCGCAGCTGCGGATCGTTTATGACCCAGAGGGGCCGCCGCCGCCGATTTCGCGCGCGTTCGGGAAATTCTCCGAGGCG GGCATCTATATCACCACCATCACGCGGCCCGAATTTTTCCGGGCGTATCTGATGGAAGTGCTCACCCCGCTGATGCGCGA TTATGATGTGGATGTGCATGTCGAGCGCTCGTCGTCTGAAATTCCGTATGCGTATGTGTGGGACCCCTCGCAGGCCGCCG GCCTGGAAGAGATTGCGCCGGCAGAACTGGTGCGCTGGTTCCCCTCGCCGAAGCTGACGCTGATTGGCGATGAGGTGGCC GACGGGGAGCCGTTTGATGAGGGTGAGGAGCGCCCGCTGGCCCTCTTTGATGCGCAGCGGGTGGATTTCTCGCTGAAGCG TTTGCAGCATTATACCGGCACACCGGTGGAGCATTTCCAGAGCTATGTGCTGTTCACGAACTATCACCGCTATGTGGACG CGTTCTGTGAATGGGCGCTGACGCAGCTGGACGGGAAGACGCGGTATACCTCTCTTTCCGTGCCGGGCGGGCTGGAGATC ACGACGCCGGATGATCTGAGCCGGGCCTCGATTGATGCCTCGCCCTGGCGGCGGTTTCAGATGCCGGCCTATCATTTGCG CGCGGCGAATGGCGCGGGCATCACGCTGGTGAATATCGGCGTGGGGCCATCGAACGCCAAGACGATTACCGATCACCTGG CGGTGCTGCGCCCGCAGGTGTGGCTGATGGTGGGCCATTGCGGCGGCCTGCGGCATTCCCAGTCCATCGGGGATTATGTG CTGGCGCACGCCTATATGCGTGAGGATCACGTGCTGGACGCGGTGTTGCCGCCGGAGATTCCGGTTCCTCCGATTGCGGA GGTTCAGGTGGCGCTGCAGCAGGCGGCGGCGAAGGTGACCGGGGAGAAGGGCGAGGCGCTGAAGAAACGTCTGCGCACAG GCACGGTGGTGACCACGGATGATCGCAACTGGGAGCTGCGGTTTACCGCGTCGGCCCGCCGGTTCAACAAGAGCCGGGCT GTGGCGATCGACATGGAGAGCGCGACGATTGCGGCCAACGGCTTCCGCCTGCGTGTGCCTTACGGGACGCTGCTGTGCGT GTCTGACAAGCCGCTGCATGGCGAAATCAAGCTGCCGGGCGCGGCCAACCGGTTTTATGAGCGCGCGATTGGCGAGCATA TCCGCATCGGGATCGAGACGCTGGAACGGCTGAGCGAAGATGGCGGGGCCGCGCTGCACAGCCGCAAGCTGCGCGCGTTT GATGAGCCGCCGTTTAGATGA
Upstream 100 bases:
>100_bases TGACGTCGTTATGGTGGCGAAGCTGATGGGAGAGGGGCAGGGGCCGCGGGTTCGGGGGCTCTGAGGGTGTGTGTGTTGAC TTTCCGGGCAGCGCAAGCCA
Downstream 100 bases:
>100_bases GCGGGCAGATGAGCATCGACTGGGACGCGCTGAAGGCTGCCGCGCGGGAGATGCAGGCGCGGGCGTATGTGCCGTATTCG GAGTATCGGGTCGGGGCGGC
Product: AMP nucleosidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MGAMSKHTKPETVIEALEALYNEAVEALSNSLNSFLHDGTPPDPRLRDEGAFCYPQLRIVYDPEGPPPPISRAFGKFSEA GIYITTITRPEFFRAYLMEVLTPLMRDYDVDVHVERSSSEIPYAYVWDPSQAAGLEEIAPAELVRWFPSPKLTLIGDEVA DGEPFDEGEERPLALFDAQRVDFSLKRLQHYTGTPVEHFQSYVLFTNYHRYVDAFCEWALTQLDGKTRYTSLSVPGGLEI TTPDDLSRASIDASPWRRFQMPAYHLRAANGAGITLVNIGVGPSNAKTITDHLAVLRPQVWLMVGHCGGLRHSQSIGDYV LAHAYMREDHVLDAVLPPEIPVPPIAEVQVALQQAAAKVTGEKGEALKKRLRTGTVVTTDDRNWELRFTASARRFNKSRA VAIDMESATIAANGFRLRVPYGTLLCVSDKPLHGEIKLPGAANRFYERAIGEHIRIGIETLERLSEDGGAALHSRKLRAF DEPPFR
Sequences:
>Translated_486_residues MGAMSKHTKPETVIEALEALYNEAVEALSNSLNSFLHDGTPPDPRLRDEGAFCYPQLRIVYDPEGPPPPISRAFGKFSEA GIYITTITRPEFFRAYLMEVLTPLMRDYDVDVHVERSSSEIPYAYVWDPSQAAGLEEIAPAELVRWFPSPKLTLIGDEVA DGEPFDEGEERPLALFDAQRVDFSLKRLQHYTGTPVEHFQSYVLFTNYHRYVDAFCEWALTQLDGKTRYTSLSVPGGLEI TTPDDLSRASIDASPWRRFQMPAYHLRAANGAGITLVNIGVGPSNAKTITDHLAVLRPQVWLMVGHCGGLRHSQSIGDYV LAHAYMREDHVLDAVLPPEIPVPPIAEVQVALQQAAAKVTGEKGEALKKRLRTGTVVTTDDRNWELRFTASARRFNKSRA VAIDMESATIAANGFRLRVPYGTLLCVSDKPLHGEIKLPGAANRFYERAIGEHIRIGIETLERLSEDGGAALHSRKLRAF DEPPFR >Mature_485_residues GAMSKHTKPETVIEALEALYNEAVEALSNSLNSFLHDGTPPDPRLRDEGAFCYPQLRIVYDPEGPPPPISRAFGKFSEAG IYITTITRPEFFRAYLMEVLTPLMRDYDVDVHVERSSSEIPYAYVWDPSQAAGLEEIAPAELVRWFPSPKLTLIGDEVAD GEPFDEGEERPLALFDAQRVDFSLKRLQHYTGTPVEHFQSYVLFTNYHRYVDAFCEWALTQLDGKTRYTSLSVPGGLEIT TPDDLSRASIDASPWRRFQMPAYHLRAANGAGITLVNIGVGPSNAKTITDHLAVLRPQVWLMVGHCGGLRHSQSIGDYVL AHAYMREDHVLDAVLPPEIPVPPIAEVQVALQQAAAKVTGEKGEALKKRLRTGTVVTTDDRNWELRFTASARRFNKSRAV AIDMESATIAANGFRLRVPYGTLLCVSDKPLHGEIKLPGAANRFYERAIGEHIRIGIETLERLSEDGGAALHSRKLRAFD EPPFR
Specific function: Involved in regulation of AMP concentrations [H]
COG id: COG0775
COG function: function code F; Nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788293, Length=478, Percent_Identity=61.2970711297071, Blast_Score=579, Evalue=1e-166,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011271 - InterPro: IPR018953 - InterPro: IPR018017 - InterPro: IPR000845 [H]
Pfam domain/function: PF10423 AMNp_N; PF01048 PNP_UDP_1 [H]
EC number: =3.2.2.4 [H]
Molecular weight: Translated: 54167; Mature: 54036
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAMSKHTKPETVIEALEALYNEAVEALSNSLNSFLHDGTPPDPRLRDEGAFCYPQLRIV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECEEEEEE YDPEGPPPPISRAFGKFSEAGIYITTITRPEFFRAYLMEVLTPLMRDYDVDVHVERSSSE ECCCCCCCCHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC IPYAYVWDPSQAAGLEEIAPAELVRWFPSPKLTLIGDEVADGEPFDEGEERPLALFDAQR CCEEEEECCHHHCCHHHCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEHHH VDFSLKRLQHYTGTPVEHFQSYVLFTNYHRYVDAFCEWALTQLDGKTRYTSLSVPGGLEI HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEE TTPDDLSRASIDASPWRRFQMPAYHLRAANGAGITLVNIGVGPSNAKTITDHLAVLRPQV CCCCCCCCCCCCCCCCHHHCCCHHEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHCCEE WLMVGHCGGLRHSQSIGDYVLAHAYMREDHVLDAVLPPEIPVPPIAEVQVALQQAAAKVT EEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHC GEKGEALKKRLRTGTVVTTDDRNWELRFTASARRFNKSRAVAIDMESATIAANGFRLRVP CCCHHHHHHHHHCCCEEEECCCCEEEEEECHHHHCCCCCEEEEEECCCEEEECCEEEEEC YGTLLCVSDKPLHGEIKLPGAANRFYERAIGEHIRIGIETLERLSEDGGAALHSRKLRAF CCEEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC DEPPFR CCCCCC >Mature Secondary Structure GAMSKHTKPETVIEALEALYNEAVEALSNSLNSFLHDGTPPDPRLRDEGAFCYPQLRIV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECEEEEEE YDPEGPPPPISRAFGKFSEAGIYITTITRPEFFRAYLMEVLTPLMRDYDVDVHVERSSSE ECCCCCCCCHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC IPYAYVWDPSQAAGLEEIAPAELVRWFPSPKLTLIGDEVADGEPFDEGEERPLALFDAQR CCEEEEECCHHHCCHHHCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEHHH VDFSLKRLQHYTGTPVEHFQSYVLFTNYHRYVDAFCEWALTQLDGKTRYTSLSVPGGLEI HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEE TTPDDLSRASIDASPWRRFQMPAYHLRAANGAGITLVNIGVGPSNAKTITDHLAVLRPQV CCCCCCCCCCCCCCCCHHHCCCHHEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHCCEE WLMVGHCGGLRHSQSIGDYVLAHAYMREDHVLDAVLPPEIPVPPIAEVQVALQQAAAKVT EEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHC GEKGEALKKRLRTGTVVTTDDRNWELRFTASARRFNKSRAVAIDMESATIAANGFRLRVP CCCHHHHHHHHHCCCEEEECCCCEEEEEECHHHHCCCCCEEEEEECCCEEEECCEEEEEC YGTLLCVSDKPLHGEIKLPGAANRFYERAIGEHIRIGIETLERLSEDGGAALHSRKLRAF CCEEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC DEPPFR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]