| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is fabK
Identifier: 114797225
GI number: 114797225
Start: 3448581
End: 3449519
Strand: Direct
Name: fabK
Synonym: HNE_3287
Alternate gene names: NA
Gene position: 3448581-3449519 (Clockwise)
Preceding gene: 114798128
Following gene: 114797980
Centisome position: 93.08
GC content: 64.54
Gene sequence:
>939_bases ATGCCCGCCAAGCCCGTAAAGACCCGCATCACCGACATGCTCGGCATCGAGAAGCCGATCATCCAGGCCGCGATGGGCTG GATTGCGCGTTCGCAGCTTTCCTCGGCCGTCTCCAATGCCGGGGGCATGGGCATCATCGAAACCTCTTCGGGCGAGCTCG ACGCCATCCGCGAAGAAATCAAGAAAATGAAGGCGCTGACCGACAAGCCCTTCGGCGTAAACGTCGCCCAGGCTTTCGTG CGCGATCCGAACATCATCCCCTTCATCATCGACCAGGGCATCAAATTCGTCACCACCTCCGCCGGTGACCCGATGAAATA CACCGCCACCCTGAAGGAAGCCGGCCTCACCGTTTTCCACGTCGTCCCCTCCCTCGCCGGCGCCCTGCGCGCCATTGAGG CAGGCGTTGACGGCCTGATCGTGGAGGGCGGCGAAGGCGGCGGCTTCAAGAACGCCAAGGATGTCGCTTCCATGGTACTG ATCCCGCAGGTCTGCGAAGCTGTCAGCGTGCCGGTTGTCGCCGCGGGCGGCATCACCGATGGCCGCTCCATGGCCGCCGC CTTCTCCCTCGGCGCCGAAGGTGTACTGATGGGCACGCGCATCCTCTCCTGCGCCGAAAGCCCCGTCCACGCCAACTGGA AGGACGCCATCATTGGCGCCGATGCGACCGACACCGTCTTCCTCAACCGCGCCGGCCCCGGCCCGGCCCTGCGCGCGCTG CGTACAGAGCGCACTTCGCGGCTGGAAAAAGACGGCAGCCCCAACATTTTCGGCGAGTTTGCCGGCACGCAGGACGTTTA CTTCGGCGGCAATCTGGAAGCGGGCATCGCGCTGACCGGTCAGGTGGCCGGGCGGATCAAGGAGGTTAAACCCGTCGCCC AGATCTTCGAGGAAACCCTGGAAGAGTATCACCGGATCGTCGCCGCCTTGCCGCGCTGA
Upstream 100 bases:
>100_bases ACGCCGATGCCGCGCGGGGGCTGAGCGACAAGCCTCTTGCCTCCCGCCGCGTCAGGCGCCTCTATCTCCGGCGAAACCCA AAAACGCCCGGAGGAACCCC
Downstream 100 bases:
>100_bases GCGGGAGCATACGCCGTTCGGGTCAATTTCGGGGGCAAAACCGCCCCCTTCTGCCCGTTTCTCTGGAAATCTGCGCCCCC CACAGGTAAACCCTCTGCAA
Product: trans-2-enoyl-ACP reductase II
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MPAKPVKTRITDMLGIEKPIIQAAMGWIARSQLSSAVSNAGGMGIIETSSGELDAIREEIKKMKALTDKPFGVNVAQAFV RDPNIIPFIIDQGIKFVTTSAGDPMKYTATLKEAGLTVFHVVPSLAGALRAIEAGVDGLIVEGGEGGGFKNAKDVASMVL IPQVCEAVSVPVVAAGGITDGRSMAAAFSLGAEGVLMGTRILSCAESPVHANWKDAIIGADATDTVFLNRAGPGPALRAL RTERTSRLEKDGSPNIFGEFAGTQDVYFGGNLEAGIALTGQVAGRIKEVKPVAQIFEETLEEYHRIVAALPR
Sequences:
>Translated_312_residues MPAKPVKTRITDMLGIEKPIIQAAMGWIARSQLSSAVSNAGGMGIIETSSGELDAIREEIKKMKALTDKPFGVNVAQAFV RDPNIIPFIIDQGIKFVTTSAGDPMKYTATLKEAGLTVFHVVPSLAGALRAIEAGVDGLIVEGGEGGGFKNAKDVASMVL IPQVCEAVSVPVVAAGGITDGRSMAAAFSLGAEGVLMGTRILSCAESPVHANWKDAIIGADATDTVFLNRAGPGPALRAL RTERTSRLEKDGSPNIFGEFAGTQDVYFGGNLEAGIALTGQVAGRIKEVKPVAQIFEETLEEYHRIVAALPR >Mature_311_residues PAKPVKTRITDMLGIEKPIIQAAMGWIARSQLSSAVSNAGGMGIIETSSGELDAIREEIKKMKALTDKPFGVNVAQAFVR DPNIIPFIIDQGIKFVTTSAGDPMKYTATLKEAGLTVFHVVPSLAGALRAIEAGVDGLIVEGGEGGGFKNAKDVASMVLI PQVCEAVSVPVVAAGGITDGRSMAAAFSLGAEGVLMGTRILSCAESPVHANWKDAIIGADATDTVFLNRAGPGPALRALR TERTSRLEKDGSPNIFGEFAGTQDVYFGGNLEAGIALTGQVAGRIKEVKPVAQIFEETLEEYHRIVAALPR
Specific function: Catalyzes the oxidative denitrification of nitronates to their corresponding aldehydes and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 32673; Mature: 32542
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAKPVKTRITDMLGIEKPIIQAAMGWIARSQLSSAVSNAGGMGIIETSSGELDAIREEI CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHH KKMKALTDKPFGVNVAQAFVRDPNIIPFIIDQGIKFVTTSAGDPMKYTATLKEAGLTVFH HHHHHHCCCCCCCHHHHHHHCCCCEEEEEECCCCEEEEECCCCCEEEEEHHHHCCCHHHH VVPSLAGALRAIEAGVDGLIVEGGEGGGFKNAKDVASMVLIPQVCEAVSVPVVAAGGITD HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCC GRSMAAAFSLGAEGVLMGTRILSCAESPVHANWKDAIIGADATDTVFLNRAGPGPALRAL CHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCCCEEEEECCCCCHHHHHH RTERTSRLEKDGSPNIFGEFAGTQDVYFGGNLEAGIALTGQVAGRIKEVKPVAQIFEETL HHHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH EEYHRIVAALPR HHHHHHHHHCCC >Mature Secondary Structure PAKPVKTRITDMLGIEKPIIQAAMGWIARSQLSSAVSNAGGMGIIETSSGELDAIREEI CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHH KKMKALTDKPFGVNVAQAFVRDPNIIPFIIDQGIKFVTTSAGDPMKYTATLKEAGLTVFH HHHHHHCCCCCCCHHHHHHHCCCCEEEEEECCCCEEEEECCCCCEEEEEHHHHCCCHHHH VVPSLAGALRAIEAGVDGLIVEGGEGGGFKNAKDVASMVLIPQVCEAVSVPVVAAGGITD HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCC GRSMAAAFSLGAEGVLMGTRILSCAESPVHANWKDAIIGADATDTVFLNRAGPGPALRAL CHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCCCEEEEECCCCCHHHHHH RTERTSRLEKDGSPNIFGEFAGTQDVYFGGNLEAGIALTGQVAGRIKEVKPVAQIFEETL HHHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH EEYHRIVAALPR HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]