Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114797220

Identifier: 114797220

GI number: 114797220

Start: 273437

End: 275680

Strand: Reverse

Name: 114797220

Synonym: HNE_0285

Alternate gene names: NA

Gene position: 275680-273437 (Counterclockwise)

Preceding gene: 114799924

Following gene: 114798348

Centisome position: 7.44

GC content: 51.96

Gene sequence:

>2244_bases
GTGCTACTTAAGGTCAATAGGATAAGAAACCTCGGGGTATTCTCAGACTTCTCTTGGGATGCCGGGCTACCCGCGTTCGA
GCGCTTCAATGTGGTGTATGGAGAGAACGGGACCGGCAAGACAACGCTCTCCCGACTGTTCGACTGTCTCAAGACAGGGC
TGCATGAAGATTACCCTGCTTTAGAATTCAAGATATCCTCGGAGACAGGCGATTTCACGCATGGTGCCGCGGCCGCAAGG
AAGGTGCGCGTATTTAATGCCGACTACGTGCAGCTGAACATTGGCCAGCTCGACGGAAATTTGAAACCAATCCTTGTAGT
TGGAGAGGAGAACAAAGCGCTCAGCGAAGCACTGAAACAGAATGAGCGGGAGCTTGCGACACGGAAAGACCTGATCGCCG
AAGCTGAGTCGCGCATAGCGCAACATGAGACAGCGCGAGGGAAACTGTTCACCTCAGTTGCAGCCACGATCAGCGAGGCG
ACAAGCGGCACCCTCCAACGCAGCTACAGAAAGAACAACGCAGAAGCCGCTTTTAAGATCCTTGGCGTCAGTAAGGAGCC
GACTGAAACGGAGCTTACTGCCCACCGTGCTACCTTACGTCAGGAAGCGATGGACAGGATCGAAGCCGAACTAACGAAAA
CCATGATGTTTAGCGGGAACGATCACTCTTTCGATCAGGCTGCCAGGGCGATCGAATCGGCCGCCTCATCATTGTGCGGA
AGAACCGTCATCAGCGACGCCATAGCGCGCCTGCAAGATTCCCCTGAGATCGCGAAGTGGGTCGAACAGGGCCATGCGCT
TCACAAAGCGCTCGGAAGCCAAACCTGCCAGTTCTGCGAGCAGGATCTACCTGCGGACCGCTGGCGGAAGCTCGAAGCCC
ACTTCAATAACGAGGATCAGGCGCTGAAGTCAGAAATAGAGCGCACCATTGACGAAATTGATCAATTGAAAAAGTTCTTA
CAATCCACATCGCTGCCGGACAAATTCGCACTTTATGGTGACTTCAGACACCAGTATGACGAGGCCAAGGAAACTCTGAC
TACTGAAGTTATGGCGGCCAGCGCCGCGCTTGACCAGATCACAGCCAAGCTGGCCGAGAAGCTCGGCGCGCGAACTGCTT
CAATTCCGTTCGACATTCGACTGGACTTTGGCGGACTTGCCAATGCCTTTTCTGCCGTTTCAGCGCTGCTGGATAATCAC
AACAAAAAGACCGAGCTGTTCACGGGCGCGAAGGACGCCGCGAAGAAGGCCATCGAAGCCTATTACCTCATCGGGATAAA
GGCGCAAGTAGCCATATTCGATGCGAAGATTGTTGATGAAATGGCACTCATTACACAGAATAAAGATGGAGATGAGGGCG
CCGGTATGGCCGCACTTGCCACGCTTGAAGCTGCAATAAACGAAAAGAAGATGCAAATCTCGAGTGCCCACAAGGCAGGG
GAAGACCTCACCAAGCTTCTGCAGACCTTCCTCGGGCGAAATGAACTTACCTTCGAGTCCAGTGACCTCGGCTACCGCGT
GAAAAGAAATGGTAAAGACGCCAAGCGCCTCAGTGAGGGCGAGAGAACCGCCATTGCGTTCATCTATTTCATCGTTCAGC
TGAAGGATCAGGACTTCGATTTGGCCGAGGGTGTCGTTGTCATTGATGACCCAGTTTCCAGCCTCGACTCTAGTTCAGTT
TATCAGGCCTTCGCGTTTCTAAAAAGCGCCGTGCGAGACGCAAAGCAGGTATTCCTGCTGACCCACAATTTTTCGTTTCT
TCGGCTGGTCATCAATTGGTTGCAGCACGATCCTGCGGCAAAGAAAAAGAACAAGATGTACATGCTAGTTTGCCGAAATG
GCGCTACTGGACGCCATTCTACAATGGGCCCTCTTGATCAGGCCCTGATCGATCACCCAACCGAATATCACTTCCTCTTC
AAGACACTCACTAACTTTAATGGTGATGGCACTATTGCTGATTGTTATCACATCCCCAATGTTACACGCAAAGTATTGGA
GACGTTCCTCGACTTTTTTGCTCCGGGGAAGAACTCTCTTTACTCGAAACTTTCTCAGGTCGACTTCGATGAAAACAAGA
AGACGGCCATTTACAAATACGCGAATGACAACTCTCACTTCACTGGCCAGGGCTTCGAGCCGGGACTCGTTCAGGAGAGT
CAGAAGAACGTCACTTACCTTTTGGAAATGATCAAAACGCTTGCTCCTCAGCACTATGCAGGAATGGTCGCGGCAACCTC
ATGA

Upstream 100 bases:

>100_bases
GCGGCTCATCTCGACTGCCGACTTACTTGCAATCGCGGATGATTGGCGCAGAAGGTTGGGACCGATTTGTCAGTGTGGGG
CGATTGCCCGGGAGGGGGTA

Downstream 100 bases:

>100_bases
AAGCAATCATCTCGCCTCCCCCGTGCCGGGCATTTCTATGACCTACAATTTCATAAATCTGGCATGGGCCGATTTCGAGG
ATCTTGCGCGAGACCTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 747; Mature: 747

Protein sequence:

>747_residues
MLLKVNRIRNLGVFSDFSWDAGLPAFERFNVVYGENGTGKTTLSRLFDCLKTGLHEDYPALEFKISSETGDFTHGAAAAR
KVRVFNADYVQLNIGQLDGNLKPILVVGEENKALSEALKQNERELATRKDLIAEAESRIAQHETARGKLFTSVAATISEA
TSGTLQRSYRKNNAEAAFKILGVSKEPTETELTAHRATLRQEAMDRIEAELTKTMMFSGNDHSFDQAARAIESAASSLCG
RTVISDAIARLQDSPEIAKWVEQGHALHKALGSQTCQFCEQDLPADRWRKLEAHFNNEDQALKSEIERTIDEIDQLKKFL
QSTSLPDKFALYGDFRHQYDEAKETLTTEVMAASAALDQITAKLAEKLGARTASIPFDIRLDFGGLANAFSAVSALLDNH
NKKTELFTGAKDAAKKAIEAYYLIGIKAQVAIFDAKIVDEMALITQNKDGDEGAGMAALATLEAAINEKKMQISSAHKAG
EDLTKLLQTFLGRNELTFESSDLGYRVKRNGKDAKRLSEGERTAIAFIYFIVQLKDQDFDLAEGVVVIDDPVSSLDSSSV
YQAFAFLKSAVRDAKQVFLLTHNFSFLRLVINWLQHDPAAKKKNKMYMLVCRNGATGRHSTMGPLDQALIDHPTEYHFLF
KTLTNFNGDGTIADCYHIPNVTRKVLETFLDFFAPGKNSLYSKLSQVDFDENKKTAIYKYANDNSHFTGQGFEPGLVQES
QKNVTYLLEMIKTLAPQHYAGMVAATS

Sequences:

>Translated_747_residues
MLLKVNRIRNLGVFSDFSWDAGLPAFERFNVVYGENGTGKTTLSRLFDCLKTGLHEDYPALEFKISSETGDFTHGAAAAR
KVRVFNADYVQLNIGQLDGNLKPILVVGEENKALSEALKQNERELATRKDLIAEAESRIAQHETARGKLFTSVAATISEA
TSGTLQRSYRKNNAEAAFKILGVSKEPTETELTAHRATLRQEAMDRIEAELTKTMMFSGNDHSFDQAARAIESAASSLCG
RTVISDAIARLQDSPEIAKWVEQGHALHKALGSQTCQFCEQDLPADRWRKLEAHFNNEDQALKSEIERTIDEIDQLKKFL
QSTSLPDKFALYGDFRHQYDEAKETLTTEVMAASAALDQITAKLAEKLGARTASIPFDIRLDFGGLANAFSAVSALLDNH
NKKTELFTGAKDAAKKAIEAYYLIGIKAQVAIFDAKIVDEMALITQNKDGDEGAGMAALATLEAAINEKKMQISSAHKAG
EDLTKLLQTFLGRNELTFESSDLGYRVKRNGKDAKRLSEGERTAIAFIYFIVQLKDQDFDLAEGVVVIDDPVSSLDSSSV
YQAFAFLKSAVRDAKQVFLLTHNFSFLRLVINWLQHDPAAKKKNKMYMLVCRNGATGRHSTMGPLDQALIDHPTEYHFLF
KTLTNFNGDGTIADCYHIPNVTRKVLETFLDFFAPGKNSLYSKLSQVDFDENKKTAIYKYANDNSHFTGQGFEPGLVQES
QKNVTYLLEMIKTLAPQHYAGMVAATS
>Mature_747_residues
MLLKVNRIRNLGVFSDFSWDAGLPAFERFNVVYGENGTGKTTLSRLFDCLKTGLHEDYPALEFKISSETGDFTHGAAAAR
KVRVFNADYVQLNIGQLDGNLKPILVVGEENKALSEALKQNERELATRKDLIAEAESRIAQHETARGKLFTSVAATISEA
TSGTLQRSYRKNNAEAAFKILGVSKEPTETELTAHRATLRQEAMDRIEAELTKTMMFSGNDHSFDQAARAIESAASSLCG
RTVISDAIARLQDSPEIAKWVEQGHALHKALGSQTCQFCEQDLPADRWRKLEAHFNNEDQALKSEIERTIDEIDQLKKFL
QSTSLPDKFALYGDFRHQYDEAKETLTTEVMAASAALDQITAKLAEKLGARTASIPFDIRLDFGGLANAFSAVSALLDNH
NKKTELFTGAKDAAKKAIEAYYLIGIKAQVAIFDAKIVDEMALITQNKDGDEGAGMAALATLEAAINEKKMQISSAHKAG
EDLTKLLQTFLGRNELTFESSDLGYRVKRNGKDAKRLSEGERTAIAFIYFIVQLKDQDFDLAEGVVVIDDPVSSLDSSSV
YQAFAFLKSAVRDAKQVFLLTHNFSFLRLVINWLQHDPAAKKKNKMYMLVCRNGATGRHSTMGPLDQALIDHPTEYHFLF
KTLTNFNGDGTIADCYHIPNVTRKVLETFLDFFAPGKNSLYSKLSQVDFDENKKTAIYKYANDNSHFTGQGFEPGLVQES
QKNVTYLLEMIKTLAPQHYAGMVAATS

Specific function: Unknown

COG id: COG4694

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82857; Mature: 82857

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKVNRIRNLGVFSDFSWDAGLPAFERFNVVYGENGTGKTTLSRLFDCLKTGLHEDYPA
CEEEECCCCCCCCCCCCCCCCCCCHHHHCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC
LEFKISSETGDFTHGAAAARKVRVFNADYVQLNIGQLDGNLKPILVVGEENKALSEALKQ
EEEEECCCCCCCCHHHHHHHEEEEEECCEEEEEEEECCCCCCEEEEECCCCHHHHHHHHH
NERELATRKDLIAEAESRIAQHETARGKLFTSVAATISEATSGTLQRSYRKNNAEAAFKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEE
LGVSKEPTETELTAHRATLRQEAMDRIEAELTKTMMFSGNDHSFDQAARAIESAASSLCG
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
RTVISDAIARLQDSPEIAKWVEQGHALHKALGSQTCQFCEQDLPADRWRKLEAHFNNEDQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHH
ALKSEIERTIDEIDQLKKFLQSTSLPDKFALYGDFRHQYDEAKETLTTEVMAASAALDQI
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAKLAEKLGARTASIPFDIRLDFGGLANAFSAVSALLDNHNKKTELFTGAKDAAKKAIEA
HHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHH
YYLIGIKAQVAIFDAKIVDEMALITQNKDGDEGAGMAALATLEAAINEKKMQISSAHKAG
HHEEEEEEEEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCH
EDLTKLLQTFLGRNELTFESSDLGYRVKRNGKDAKRLSEGERTAIAFIYFIVQLKDQDFD
HHHHHHHHHHHCCCCEEEECCCCCEEEECCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCC
LAEGVVVIDDPVSSLDSSSVYQAFAFLKSAVRDAKQVFLLTHNFSFLRLVINWLQHDPAA
HHCCEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHCCCCC
KKKNKMYMLVCRNGATGRHSTMGPLDQALIDHPTEYHFLFKTLTNFNGDGTIADCYHIPN
CCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEHHHHCCH
VTRKVLETFLDFFAPGKNSLYSKLSQVDFDENKKTAIYKYANDNSHFTGQGFEPGLVQES
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHH
QKNVTYLLEMIKTLAPQHYAGMVAATS
HHHHHHHHHHHHHHCCHHHHCEEEECC
>Mature Secondary Structure
MLLKVNRIRNLGVFSDFSWDAGLPAFERFNVVYGENGTGKTTLSRLFDCLKTGLHEDYPA
CEEEECCCCCCCCCCCCCCCCCCCHHHHCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC
LEFKISSETGDFTHGAAAARKVRVFNADYVQLNIGQLDGNLKPILVVGEENKALSEALKQ
EEEEECCCCCCCCHHHHHHHEEEEEECCEEEEEEEECCCCCCEEEEECCCCHHHHHHHHH
NERELATRKDLIAEAESRIAQHETARGKLFTSVAATISEATSGTLQRSYRKNNAEAAFKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEE
LGVSKEPTETELTAHRATLRQEAMDRIEAELTKTMMFSGNDHSFDQAARAIESAASSLCG
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
RTVISDAIARLQDSPEIAKWVEQGHALHKALGSQTCQFCEQDLPADRWRKLEAHFNNEDQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHH
ALKSEIERTIDEIDQLKKFLQSTSLPDKFALYGDFRHQYDEAKETLTTEVMAASAALDQI
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAKLAEKLGARTASIPFDIRLDFGGLANAFSAVSALLDNHNKKTELFTGAKDAAKKAIEA
HHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHH
YYLIGIKAQVAIFDAKIVDEMALITQNKDGDEGAGMAALATLEAAINEKKMQISSAHKAG
HHEEEEEEEEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCH
EDLTKLLQTFLGRNELTFESSDLGYRVKRNGKDAKRLSEGERTAIAFIYFIVQLKDQDFD
HHHHHHHHHHHCCCCEEEECCCCCEEEECCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCC
LAEGVVVIDDPVSSLDSSSVYQAFAFLKSAVRDAKQVFLLTHNFSFLRLVINWLQHDPAA
HHCCEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHCCCCC
KKKNKMYMLVCRNGATGRHSTMGPLDQALIDHPTEYHFLFKTLTNFNGDGTIADCYHIPN
CCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEHHHHCCH
VTRKVLETFLDFFAPGKNSLYSKLSQVDFDENKKTAIYKYANDNSHFTGQGFEPGLVQES
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHH
QKNVTYLLEMIKTLAPQHYAGMVAATS
HHHHHHHHHHHHHHCCHHHHCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA