| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798348
Identifier: 114798348
GI number: 114798348
Start: 271099
End: 273480
Strand: Reverse
Name: 114798348
Synonym: HNE_0284
Alternate gene names: NA
Gene position: 273480-271099 (Counterclockwise)
Preceding gene: 114797220
Following gene: 114799499
Centisome position: 7.38
GC content: 53.69
Gene sequence:
>2382_bases TTGCTCCTCAGCACTATGCAGGAATGGTCGCGGCAACCTCATGAAAGCAATCATCTCGCCTCCCCCGTGCCGGGCATTTC TATGACCTACAATTTCATAAATCTGGCATGGGCCGATTTCGAGGATCTTGCGCGAGACCTTCTTGGAGCGGAATTTGGAA TGCGATTTGAGTCATTCGGACCCGGCCCCGACGGTGGTATGGACGGCCGGCATGCCAAGGGCTTGAGCAAGACAGTACTC CAAGCCAAGCATTACGAAGGATCACCGGCGAGTGCACTTACCGCCGCAATGAAGCGTGAGCGGGGTTCGATCGAACGACT GGCACCATCAAGATACTTACTGGCCACTTCTCGATCACTCTCGCCTAAGAACAAGGCGCAACTGGCGACCATCTTAGGTC CCTTACTTCACGCACAAGATGACATCTTCTCGGCAGAGGATATCAATGGTCTCCTCCGCAAATTCCCAGAGGTCGAGAAA GCCCATATCAAGCTTTGGCTGTCCAGTGCCGCCGTCCTTGAACGGGTAACCCGTGCAGCGGCTCACGCATTCACAGCGAT GAACAATGCTGAGATTGCCGCGAAAGTACGCGTCTACGCCCCGAACGCCAGCTTCAAAGCCGCTCGCGATACGTTGGAAG GACAGCATGTCCTAATCATATCGGGGCCGCCAGGCGTAGGCAAAACGACGCTCGCCGAGATGTTGTCCTATGCATATGCG GGCGAAGACTGGGAACTTGTGCCGATCAGAAGCCTTGTGGATGGGTTTGAAGCAATCGTCGATGCAAAGAAGCAGATCTT TTACTTTGACGATTTCCTTGGGACCATCGCCCTCGACAGAAATGCACTAGCTTCAAAAGATTCTGATTTGGCGCGCTTCA TGAAGCGCATACGGCATTCGCCAAACGCTCGTTTCATCCTAACGACCCGGGCGTATATCTTTGAAGAGGCGCGGCGGGTA TCTGAGCATCTTGCCGATGAGAGGCTCAATATCAGCAAATACATTTTGGATATTGGCGTTTACACGAGGCGCATCAGGGC ACGCATCCTCTACAACCACCTTCTAGTGGCGGACACGCCGGCGGCACACATCAGGGCTCTCGTTGGGAGCGGCAAGATCG CGAAGATTGTGGATCATGCGAACTATAACCCTCGCGTTATAGAATGGATGACCGATGGGGTGCACTTGGCATCGATCCAG CCCGAGGGCTACGCCGACGCTTTTCTTGCTGCCTTGGCGAACCCATCGCAGCTTTGGGACACCGCCTTCCGAACGCACAT ACCGGAGAAGTGCAGGCACCTCTTGTTCGCAATATTCTTCGGGTCTCAGTACGGAGAGGAAATCGCTGATTTGCGCGTTG CCTATCAGGCGCTCCACCCGCATCTTTGCGCACACTTCGGGCATGCTCACGACGCCAAAGACTTCGAAGAGTCGCTGCGG ATTCTGGAGGGAAGCTTCATAAAAATTGAGAGCGGAACCGTTTCATTTGTGAATCCATCGGTTAGAGACTATCTGGCCGC GTATCTGAACGATATAGTGATGCTTAGGGAGTTCGCCTTACCTTCAAGACAAGGCAAGTGGGCCCGCTTGGTTTGGGAGC ATGGCGTCAGTCTTTCCGCCGAGAAGGCAGAACTCGCAAACTTTGCGAGCGCGTTTCACTGCGTGGCATCGGCCCTCCTT CACATTCCGACTTGGAAAAAATCAACGCGCTATCCGCATTCGTTTAGCGCAGCCGACCTTTCCAACTGCGATCGTATCGA ACTGCTACTGAAGTGGTGGGAAGCATCAGAATTGGGGGATTTCGCGGACTTAGCGCTAGCTCTTGCCCGCAATCCCGTTG ATGGCTTCAGCTCACACCGCGACGGCCGTGATTTGGTCGAACTCATCCAAAATCTACGCTGTTTCTACGACGGATTTCCG TATCTGGATGATCTGCTGACCGCACTGGAGCAAGGAGTCATTTCGATCCTGCAATCCGGGATGGAGCTTGATGACTTGGA GATTATCGCTCGTTGCGTAACCGATGCGACTTACGAGTTCAGTGGTGATGTAATAGCAGTAGCGAAAGCGGCGATACTGA GGGAATTCGATGAAAACGAACGGGCGACGTCTGAAACGGATTCGGAATACACTCTGGCGGATCGTGTAAAGACGCTGGAA AACCTGGCTGCGATTGGCGGGGTGTCACAAGCAATGCTCACGTCAGCCGTGAAAACGGTCAACAATCGGATAGCCGCGAT TGTCGATGAAACTGAAACAGCTGAAGAGCCGACGTTTACGGGCACGGCAATGGCTACTGCCGACAAGTTCGATGATCAAC AGTTGGCAGATCTGTTTTTGCCGCTGCTCAATCTGCCCGCAAAGCATCCTCCCACCGATTGA
Upstream 100 bases:
>100_bases GCGAATGACAACTCTCACTTCACTGGCCAGGGCTTCGAGCCGGGACTCGTTCAGGAGAGTCAGAAGAACGTCACTTACCT TTTGGAAATGATCAAAACGC
Downstream 100 bases:
>100_bases AAATAAAAGTTGCCGAAAATTGCTTTCGGCCGGCATACTTCTGTAGTGCCTATTTGGGCATCCCAGCTGAAATTGACGAA GACTTGTTGGAACAGCTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 793; Mature: 793
Protein sequence:
>793_residues MLLSTMQEWSRQPHESNHLASPVPGISMTYNFINLAWADFEDLARDLLGAEFGMRFESFGPGPDGGMDGRHAKGLSKTVL QAKHYEGSPASALTAAMKRERGSIERLAPSRYLLATSRSLSPKNKAQLATILGPLLHAQDDIFSAEDINGLLRKFPEVEK AHIKLWLSSAAVLERVTRAAAHAFTAMNNAEIAAKVRVYAPNASFKAARDTLEGQHVLIISGPPGVGKTTLAEMLSYAYA GEDWELVPIRSLVDGFEAIVDAKKQIFYFDDFLGTIALDRNALASKDSDLARFMKRIRHSPNARFILTTRAYIFEEARRV SEHLADERLNISKYILDIGVYTRRIRARILYNHLLVADTPAAHIRALVGSGKIAKIVDHANYNPRVIEWMTDGVHLASIQ PEGYADAFLAALANPSQLWDTAFRTHIPEKCRHLLFAIFFGSQYGEEIADLRVAYQALHPHLCAHFGHAHDAKDFEESLR ILEGSFIKIESGTVSFVNPSVRDYLAAYLNDIVMLREFALPSRQGKWARLVWEHGVSLSAEKAELANFASAFHCVASALL HIPTWKKSTRYPHSFSAADLSNCDRIELLLKWWEASELGDFADLALALARNPVDGFSSHRDGRDLVELIQNLRCFYDGFP YLDDLLTALEQGVISILQSGMELDDLEIIARCVTDATYEFSGDVIAVAKAAILREFDENERATSETDSEYTLADRVKTLE NLAAIGGVSQAMLTSAVKTVNNRIAAIVDETETAEEPTFTGTAMATADKFDDQQLADLFLPLLNLPAKHPPTD
Sequences:
>Translated_793_residues MLLSTMQEWSRQPHESNHLASPVPGISMTYNFINLAWADFEDLARDLLGAEFGMRFESFGPGPDGGMDGRHAKGLSKTVL QAKHYEGSPASALTAAMKRERGSIERLAPSRYLLATSRSLSPKNKAQLATILGPLLHAQDDIFSAEDINGLLRKFPEVEK AHIKLWLSSAAVLERVTRAAAHAFTAMNNAEIAAKVRVYAPNASFKAARDTLEGQHVLIISGPPGVGKTTLAEMLSYAYA GEDWELVPIRSLVDGFEAIVDAKKQIFYFDDFLGTIALDRNALASKDSDLARFMKRIRHSPNARFILTTRAYIFEEARRV SEHLADERLNISKYILDIGVYTRRIRARILYNHLLVADTPAAHIRALVGSGKIAKIVDHANYNPRVIEWMTDGVHLASIQ PEGYADAFLAALANPSQLWDTAFRTHIPEKCRHLLFAIFFGSQYGEEIADLRVAYQALHPHLCAHFGHAHDAKDFEESLR ILEGSFIKIESGTVSFVNPSVRDYLAAYLNDIVMLREFALPSRQGKWARLVWEHGVSLSAEKAELANFASAFHCVASALL HIPTWKKSTRYPHSFSAADLSNCDRIELLLKWWEASELGDFADLALALARNPVDGFSSHRDGRDLVELIQNLRCFYDGFP YLDDLLTALEQGVISILQSGMELDDLEIIARCVTDATYEFSGDVIAVAKAAILREFDENERATSETDSEYTLADRVKTLE NLAAIGGVSQAMLTSAVKTVNNRIAAIVDETETAEEPTFTGTAMATADKFDDQQLADLFLPLLNLPAKHPPTD >Mature_793_residues MLLSTMQEWSRQPHESNHLASPVPGISMTYNFINLAWADFEDLARDLLGAEFGMRFESFGPGPDGGMDGRHAKGLSKTVL QAKHYEGSPASALTAAMKRERGSIERLAPSRYLLATSRSLSPKNKAQLATILGPLLHAQDDIFSAEDINGLLRKFPEVEK AHIKLWLSSAAVLERVTRAAAHAFTAMNNAEIAAKVRVYAPNASFKAARDTLEGQHVLIISGPPGVGKTTLAEMLSYAYA GEDWELVPIRSLVDGFEAIVDAKKQIFYFDDFLGTIALDRNALASKDSDLARFMKRIRHSPNARFILTTRAYIFEEARRV SEHLADERLNISKYILDIGVYTRRIRARILYNHLLVADTPAAHIRALVGSGKIAKIVDHANYNPRVIEWMTDGVHLASIQ PEGYADAFLAALANPSQLWDTAFRTHIPEKCRHLLFAIFFGSQYGEEIADLRVAYQALHPHLCAHFGHAHDAKDFEESLR ILEGSFIKIESGTVSFVNPSVRDYLAAYLNDIVMLREFALPSRQGKWARLVWEHGVSLSAEKAELANFASAFHCVASALL HIPTWKKSTRYPHSFSAADLSNCDRIELLLKWWEASELGDFADLALALARNPVDGFSSHRDGRDLVELIQNLRCFYDGFP YLDDLLTALEQGVISILQSGMELDDLEIIARCVTDATYEFSGDVIAVAKAAILREFDENERATSETDSEYTLADRVKTLE NLAAIGGVSQAMLTSAVKTVNNRIAAIVDETETAEEPTFTGTAMATADKFDDQQLADLFLPLLNLPAKHPPTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87932; Mature: 87932
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSTMQEWSRQPHESNHLASPVPGISMTYNFINLAWADFEDLARDLLGAEFGMRFESFG CCCCCHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHCCCHHCCC PGPDGGMDGRHAKGLSKTVLQAKHYEGSPASALTAAMKRERGSIERLAPSRYLLATSRSL CCCCCCCCCCHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHCCCCEEEEECCCC SPKNKAQLATILGPLLHAQDDIFSAEDINGLLRKFPEVEKAHIKLWLSSAAVLERVTRAA CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AHAFTAMNNAEIAAKVRVYAPNASFKAARDTLEGQHVLIISGPPGVGKTTLAEMLSYAYA HHHHHHCCCCEEEEEEEEECCCCCHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHC GEDWELVPIRSLVDGFEAIVDAKKQIFYFDDFLGTIALDRNALASKDSDLARFMKRIRHS CCCCEEEEHHHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCC PNARFILTTRAYIFEEARRVSEHLADERLNISKYILDIGVYTRRIRARILYNHLLVADTP CCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCC AAHIRALVGSGKIAKIVDHANYNPRVIEWMTDGVHLASIQPEGYADAFLAALANPSQLWD HHHHHHHHCCCCCEEHHHCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHCCHHHHHH TAFRTHIPEKCRHLLFAIFFGSQYGEEIADLRVAYQALHPHLCAHFGHAHDAKDFEESLR HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH ILEGSFIKIESGTVSFVNPSVRDYLAAYLNDIVMLREFALPSRQGKWARLVWEHGVSLSA HHCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCC EKAELANFASAFHCVASALLHIPTWKKSTRYPHSFSAADLSNCDRIELLLKWWEASELGD HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCH FADLALALARNPVDGFSSHRDGRDLVELIQNLRCFYDGFPYLDDLLTALEQGVISILQSG HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC MELDDLEIIARCVTDATYEFSGDVIAVAKAAILREFDENERATSETDSEYTLADRVKTLE CCCHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH NLAAIGGVSQAMLTSAVKTVNNRIAAIVDETETAEEPTFTGTAMATADKFDDQQLADLFL HHHHHCCHHHHHHHHHHHHHHCHHEEEEECCCCCCCCCCCCCHHHHHHCCCHHHHHHHHH PLLNLPAKHPPTD HHHCCCCCCCCCC >Mature Secondary Structure MLLSTMQEWSRQPHESNHLASPVPGISMTYNFINLAWADFEDLARDLLGAEFGMRFESFG CCCCCHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHCCCHHCCC PGPDGGMDGRHAKGLSKTVLQAKHYEGSPASALTAAMKRERGSIERLAPSRYLLATSRSL CCCCCCCCCCHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHCCCCEEEEECCCC SPKNKAQLATILGPLLHAQDDIFSAEDINGLLRKFPEVEKAHIKLWLSSAAVLERVTRAA CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AHAFTAMNNAEIAAKVRVYAPNASFKAARDTLEGQHVLIISGPPGVGKTTLAEMLSYAYA HHHHHHCCCCEEEEEEEEECCCCCHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHC GEDWELVPIRSLVDGFEAIVDAKKQIFYFDDFLGTIALDRNALASKDSDLARFMKRIRHS CCCCEEEEHHHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCC PNARFILTTRAYIFEEARRVSEHLADERLNISKYILDIGVYTRRIRARILYNHLLVADTP CCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCC AAHIRALVGSGKIAKIVDHANYNPRVIEWMTDGVHLASIQPEGYADAFLAALANPSQLWD HHHHHHHHCCCCCEEHHHCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHCCHHHHHH TAFRTHIPEKCRHLLFAIFFGSQYGEEIADLRVAYQALHPHLCAHFGHAHDAKDFEESLR HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH ILEGSFIKIESGTVSFVNPSVRDYLAAYLNDIVMLREFALPSRQGKWARLVWEHGVSLSA HHCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCC EKAELANFASAFHCVASALLHIPTWKKSTRYPHSFSAADLSNCDRIELLLKWWEASELGD HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCH FADLALALARNPVDGFSSHRDGRDLVELIQNLRCFYDGFPYLDDLLTALEQGVISILQSG HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC MELDDLEIIARCVTDATYEFSGDVIAVAKAAILREFDENERATSETDSEYTLADRVKTLE CCCHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH NLAAIGGVSQAMLTSAVKTVNNRIAAIVDETETAEEPTFTGTAMATADKFDDQQLADLFL HHHHHCCHHHHHHHHHHHHHHCHHEEEEECCCCCCCCCCCCCHHHHHHCCCHHHHHHHHH PLLNLPAKHPPTD HHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]