| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797218
Identifier: 114797218
GI number: 114797218
Start: 1187273
End: 1188742
Strand: Direct
Name: 114797218
Synonym: HNE_1179
Alternate gene names: NA
Gene position: 1187273-1188742 (Clockwise)
Preceding gene: 114799978
Following gene: 114799216
Centisome position: 32.04
GC content: 62.24
Gene sequence:
>1470_bases GTGAATTATGCGGCTGTGGGAGCCCGGTCGAGGTGGCGGCGGAACGACCAAGCTCCACGGAGTAGGAAGGTCGGACCTCA AAGAGCAAAGCGCACTAACCTCGGAGGGATAGAGAAAGTGGGATTCAAAACCGGGTATCTGGCAGCCGCGCTGGCGTGCG CTTTTAGCGCGCTGTTCCTGAGCGCGGGGCCTGCGGCAGCAGAGATGACGGACGAAGCGGCCAGGGCGGCAATCGAGGCG GGGCAGTCGGCGATGCAGCGCCAGGATTGGACCAGCGCGTTTGGCCAGTTCGAGCGTGCATCCGCCAATGAGGACCTCGC GCCGGTCGCGCGCTTCTATACAGGTCTCACCCGGGAACAGATGGGAGATCAGGCTGCGGCCGTCGAGGATTACAAAGCCG TGCTGGAGATGAACAGTTACGCGCTGGGCGACCTGCGCAGCGTCACCTATGACCGGCTGACCGAAATCGGCCTGGACCAG CTGGAGAAGTCCGACCCCGTGGCGGCAATCGTCGCGCTTGAGGCCGCCGCCATCTCGGGAAGTTTTGATACGCTCTATTA TTGGGGGGCGGCGGCTGTCCGCGTGCAGGATTGGACATCCCTTCAGCGCGCGGGTGAGCGCCTGCTCCAGCTTCAGCGGC ATAGTGGCGAAGGCTGGCAGTTCACGTTGCACGCGCTGGAACAAATGGCCAGGGCCGGGGGCGCGGATGCATCGGATCTC CAGGACCGGATTTTGCGGACCCGCGATCAGATAATGGCCCAGCCCATTCTGCTGAACGAGTTGTCAGTGGGTGAGGAAGA CGGCGCCCACGTCGTGACAGCGACGATGGTGGGCAATGCGGCGCCCGCTGGGAGCTGGTGCATCATAGATTTCTCTCTCA ACATGGCGCAACGCAACTGGCGCGCGGGCGTCATGGTTACGGCGCCCGCGTCCGGACAGGCCGTGCAAATCAAAGCCCGG CCCGCGACCAATGACAACTCCAGCGCGCCGCCGCCGGTGTCGGAGCGTATCTACAATGTGAGGTACAAGGAGGTTTACTG CGAGTTGCCAGACGCGGCGGCCGCAACGCCGCCGGAGGCAAAGAAGGTAAAGCTGGACGGTTGCCCTGACACTGAACGAG AGGCGCGCCAACTGCTTGCCAATCGCCCGGAAATAGGCCGGCTCAGCGACGGCAGAGACGCAGAATACGCTTATCCGGCA GGCGGCCTCACCCTGTTCGGTTCGCCGGTAAGCCGTCTTACCGTCAAAGACGACCTTTACCGGTTTGGCCTGAGCGGCGC CTTTGCCGGTCACGAGAAAAAATTTGCGCAGCGCTATCGTACAGATTGCGCCGAAGACGGGATCAGCGACTATTGCCAGA AATCCCATGAGCGCAAGAATGGCTACATATCGTTTGCGACCCTGGCAGATTCCGATTGGCCAGAGGGCATGCGCCCGCGG CAGACCTATCTGAGCTGTCTCTACAAATGA
Upstream 100 bases:
>100_bases GCGGGGCCATCAAGGCGCTGGCGCTGGGGCGCGGGAAGGCGCGGGTTGTGCGGGAGGAGTGAGGGGGTGGTCACCGGGTT GTTGAATCGCAGATGGGATT
Downstream 100 bases:
>100_bases GGGTGTTGCCCTCAAAGCCAGACACAGTGTCTCGGTCTTATCGGTGATGCTGCATCAGAATGAGCTTCGAGAGATTCGGT GGCCGGCCCGAAAGAGTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MNYAAVGARSRWRRNDQAPRSRKVGPQRAKRTNLGGIEKVGFKTGYLAAALACAFSALFLSAGPAAAEMTDEAARAAIEA GQSAMQRQDWTSAFGQFERASANEDLAPVARFYTGLTREQMGDQAAAVEDYKAVLEMNSYALGDLRSVTYDRLTEIGLDQ LEKSDPVAAIVALEAAAISGSFDTLYYWGAAAVRVQDWTSLQRAGERLLQLQRHSGEGWQFTLHALEQMARAGGADASDL QDRILRTRDQIMAQPILLNELSVGEEDGAHVVTATMVGNAAPAGSWCIIDFSLNMAQRNWRAGVMVTAPASGQAVQIKAR PATNDNSSAPPPVSERIYNVRYKEVYCELPDAAAATPPEAKKVKLDGCPDTEREARQLLANRPEIGRLSDGRDAEYAYPA GGLTLFGSPVSRLTVKDDLYRFGLSGAFAGHEKKFAQRYRTDCAEDGISDYCQKSHERKNGYISFATLADSDWPEGMRPR QTYLSCLYK
Sequences:
>Translated_489_residues MNYAAVGARSRWRRNDQAPRSRKVGPQRAKRTNLGGIEKVGFKTGYLAAALACAFSALFLSAGPAAAEMTDEAARAAIEA GQSAMQRQDWTSAFGQFERASANEDLAPVARFYTGLTREQMGDQAAAVEDYKAVLEMNSYALGDLRSVTYDRLTEIGLDQ LEKSDPVAAIVALEAAAISGSFDTLYYWGAAAVRVQDWTSLQRAGERLLQLQRHSGEGWQFTLHALEQMARAGGADASDL QDRILRTRDQIMAQPILLNELSVGEEDGAHVVTATMVGNAAPAGSWCIIDFSLNMAQRNWRAGVMVTAPASGQAVQIKAR PATNDNSSAPPPVSERIYNVRYKEVYCELPDAAAATPPEAKKVKLDGCPDTEREARQLLANRPEIGRLSDGRDAEYAYPA GGLTLFGSPVSRLTVKDDLYRFGLSGAFAGHEKKFAQRYRTDCAEDGISDYCQKSHERKNGYISFATLADSDWPEGMRPR QTYLSCLYK >Mature_489_residues MNYAAVGARSRWRRNDQAPRSRKVGPQRAKRTNLGGIEKVGFKTGYLAAALACAFSALFLSAGPAAAEMTDEAARAAIEA GQSAMQRQDWTSAFGQFERASANEDLAPVARFYTGLTREQMGDQAAAVEDYKAVLEMNSYALGDLRSVTYDRLTEIGLDQ LEKSDPVAAIVALEAAAISGSFDTLYYWGAAAVRVQDWTSLQRAGERLLQLQRHSGEGWQFTLHALEQMARAGGADASDL QDRILRTRDQIMAQPILLNELSVGEEDGAHVVTATMVGNAAPAGSWCIIDFSLNMAQRNWRAGVMVTAPASGQAVQIKAR PATNDNSSAPPPVSERIYNVRYKEVYCELPDAAAATPPEAKKVKLDGCPDTEREARQLLANRPEIGRLSDGRDAEYAYPA GGLTLFGSPVSRLTVKDDLYRFGLSGAFAGHEKKFAQRYRTDCAEDGISDYCQKSHERKNGYISFATLADSDWPEGMRPR QTYLSCLYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53425; Mature: 53425
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYAAVGARSRWRRNDQAPRSRKVGPQRAKRTNLGGIEKVGFKTGYLAAALACAFSALFL CCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHH SAGPAAAEMTDEAARAAIEAGQSAMQRQDWTSAFGQFERASANEDLAPVARFYTGLTREQ HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH MGDQAAAVEDYKAVLEMNSYALGDLRSVTYDRLTEIGLDQLEKSDPVAAIVALEAAAISG HCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHCCCCCEEHHHHHHHHHCC SFDTLYYWGAAAVRVQDWTSLQRAGERLLQLQRHSGEGWQFTLHALEQMARAGGADASDL CCCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCHHHH QDRILRTRDQIMAQPILLNELSVGEEDGAHVVTATMVGNAAPAGSWCIIDFSLNMAQRNW HHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEECHHHCCC RAGVMVTAPASGQAVQIKARPATNDNSSAPPPVSERIYNVRYKEVYCELPDAAAATPPEA CCCEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCEEHHHEEECCCCCCCCCCCC KKVKLDGCPDTEREARQLLANRPEIGRLSDGRDAEYAYPAGGLTLFGSPVSRLTVKDDLY CEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCEEEECCCHHHEEHHHHHH RFGLSGAFAGHEKKFAQRYRTDCAEDGISDYCQKSHERKNGYISFATLADSDWPEGMRPR HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHH QTYLSCLYK HHHHHHHCC >Mature Secondary Structure MNYAAVGARSRWRRNDQAPRSRKVGPQRAKRTNLGGIEKVGFKTGYLAAALACAFSALFL CCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHH SAGPAAAEMTDEAARAAIEAGQSAMQRQDWTSAFGQFERASANEDLAPVARFYTGLTREQ HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH MGDQAAAVEDYKAVLEMNSYALGDLRSVTYDRLTEIGLDQLEKSDPVAAIVALEAAAISG HCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHCCCCCEEHHHHHHHHHCC SFDTLYYWGAAAVRVQDWTSLQRAGERLLQLQRHSGEGWQFTLHALEQMARAGGADASDL CCCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCHHHH QDRILRTRDQIMAQPILLNELSVGEEDGAHVVTATMVGNAAPAGSWCIIDFSLNMAQRNW HHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEECHHHCCC RAGVMVTAPASGQAVQIKARPATNDNSSAPPPVSERIYNVRYKEVYCELPDAAAATPPEA CCCEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCEEHHHEEECCCCCCCCCCCC KKVKLDGCPDTEREARQLLANRPEIGRLSDGRDAEYAYPAGGLTLFGSPVSRLTVKDDLY CEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCEEEECCCHHHEEHHHHHH RFGLSGAFAGHEKKFAQRYRTDCAEDGISDYCQKSHERKNGYISFATLADSDWPEGMRPR HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHH QTYLSCLYK HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA