| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is yigI [C]
Identifier: 114797200
GI number: 114797200
Start: 3142703
End: 3143341
Strand: Direct
Name: yigI [C]
Synonym: HNE_2984
Alternate gene names: 114797200
Gene position: 3142703-3143341 (Clockwise)
Preceding gene: 114798367
Following gene: 114799716
Centisome position: 84.82
GC content: 59.62
Gene sequence:
>639_bases ATGTCTTGGGCTTTGCCGCTGCGTCAAATGCCATTTTGGGCGTCTCCTCTTCCGCTAGGGCGGGTCACGTTTGCCGTTTC TTTGGAATTGCTGCGATGTTATCCGGCTGGGATAAGGCGTCAAATCCGGACGCGGGGTAAGCCTCTCATGAATGATAACA GAAATGACCCTGATCGCATCGCCGCCGTGATGCGCGAGCATGTCGAGATGATGAACAGCTCTGTGCCGTGGGGCAATGAG GTGGGCTTTGAGGTCACCAAGATCGAACGCGGGCATGTGTGGGGGCGCCAGCCCTGGGCGGAGAATCTGGTGGGCGACCC GGACACCGGCGTGATCCATGGCGGGGTGATCACGACGTTTCTGGATAACCTCTCGGGCATGGCGTGTACCTCGGCGATGA CGAAGCTGCGCTTTGTGGCGACGATTGACCTGCGGATTGATTATATGCGCCCGGCAGAAAAAGGCCTGGAGATCATCGGG GAAGCCGAATGCTACCGGGTGACCAAGAGCGTGTGCTTTACGCGCGCCTGGGCCTATCACGGGACGCGGGACACGCTGAT CGCCACCTCGGCGGGCACATTTGCCATCAACAAGCCGCGCTTTGGCTCGCAAAGCCCGCAGGGGAAGACGGAAGTATGA
Upstream 100 bases:
>100_bases CCGCCGATATTGTCGGACTTCTCGAAACAGTCATACGGCAGGCTGGCGTCTTTCAGCCGTTTTGCCATGGTGAAACCGGA ACAACCGGCGCCGATGATGC
Downstream 100 bases:
>100_bases ACCCGAAGCTGACAAATCCGCGCGCGGATGAAGTGGACGCCATCCTGAAGCGGGTGCCGTTTGCGCAGACGCTGGGCATG CGCTGCGAAGTGCTGGGCGA
Product: thioesterase family protein
Products: NA
Alternate protein names: Thioesterase Family Protein; Phenylacetic Acid Degradation-Related Protein; Phenylacetic Acid Degradation-Like Protein; Thioesterase Superfamily; Thioesterase Family Protein Domain Protein; Conserved Domain Protein; Protein Possibly Involved In Aromatic Compounds Catabolism
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MSWALPLRQMPFWASPLPLGRVTFAVSLELLRCYPAGIRRQIRTRGKPLMNDNRNDPDRIAAVMREHVEMMNSSVPWGNE VGFEVTKIERGHVWGRQPWAENLVGDPDTGVIHGGVITTFLDNLSGMACTSAMTKLRFVATIDLRIDYMRPAEKGLEIIG EAECYRVTKSVCFTRAWAYHGTRDTLIATSAGTFAINKPRFGSQSPQGKTEV
Sequences:
>Translated_212_residues MSWALPLRQMPFWASPLPLGRVTFAVSLELLRCYPAGIRRQIRTRGKPLMNDNRNDPDRIAAVMREHVEMMNSSVPWGNE VGFEVTKIERGHVWGRQPWAENLVGDPDTGVIHGGVITTFLDNLSGMACTSAMTKLRFVATIDLRIDYMRPAEKGLEIIG EAECYRVTKSVCFTRAWAYHGTRDTLIATSAGTFAINKPRFGSQSPQGKTEV >Mature_211_residues SWALPLRQMPFWASPLPLGRVTFAVSLELLRCYPAGIRRQIRTRGKPLMNDNRNDPDRIAAVMREHVEMMNSSVPWGNEV GFEVTKIERGHVWGRQPWAENLVGDPDTGVIHGGVITTFLDNLSGMACTSAMTKLRFVATIDLRIDYMRPAEKGLEIIGE AECYRVTKSVCFTRAWAYHGTRDTLIATSAGTFAINKPRFGSQSPQGKTEV
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23727; Mature: 23595
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWALPLRQMPFWASPLPLGRVTFAVSLELLRCYPAGIRRQIRTRGKPLMNDNRNDPDRI CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHH AAVMREHVEMMNSSVPWGNEVGFEVTKIERGHVWGRQPWAENLVGDPDTGVIHGGVITTF HHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCCCEEECHHHHHH LDNLSGMACTSAMTKLRFVATIDLRIDYMRPAEKGLEIIGEAECYRVTKSVCFTRAWAYH HHHCCCHHHHHHHHHHEEEEEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCC GTRDTLIATSAGTFAINKPRFGSQSPQGKTEV CCCCEEEEECCCCEEECCCCCCCCCCCCCCCC >Mature Secondary Structure SWALPLRQMPFWASPLPLGRVTFAVSLELLRCYPAGIRRQIRTRGKPLMNDNRNDPDRI CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHH AAVMREHVEMMNSSVPWGNEVGFEVTKIERGHVWGRQPWAENLVGDPDTGVIHGGVITTF HHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCCCEEECHHHHHH LDNLSGMACTSAMTKLRFVATIDLRIDYMRPAEKGLEIIGEAECYRVTKSVCFTRAWAYH HHHCCCHHHHHHHHHHEEEEEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCC GTRDTLIATSAGTFAINKPRFGSQSPQGKTEV CCCCEEEEECCCCEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA