| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797193
Identifier: 114797193
GI number: 114797193
Start: 1852759
End: 1853835
Strand: Reverse
Name: 114797193
Synonym: HNE_1807
Alternate gene names: NA
Gene position: 1853835-1852759 (Counterclockwise)
Preceding gene: 114798446
Following gene: 114799632
Centisome position: 50.04
GC content: 59.24
Gene sequence:
>1077_bases ATGACCGCACCCCTTGAAACTGTTCCGCAACTTATCGCTCGTGCCCGCCAGGCCCTTCAGGCCGGTGGCAACCCTCAGAT GGCTGTGGACGCCATCAATGAGGCGCTGAAGCAGGCGCCGAGAGATATTGGCCTGATCCTTTATCTGGGTGATGCGCACC ATGCCGCCGGCCAAAAAAGCGACGCAGGGCATGCTTACGGGATAGGTCTGAAGCTTGCCGCACAGATCAATCCCGTCTCG ATCCCGGATGGCATTCGTCAGGCATTGCAGCGGGCCGAAGCCCGGCGCGCTGAGTATTCAGCCGCGTATGAGAGCTTTCT ACGCGCCCGCCTGCCCGGCAGTGAGAAGGAGACACGCTTCGATCAGGCGCTCGAAATTCTTCTCGGGCGCCGGCAGATAT ATGTTCAGCAACCGACGAAGTTCTATTTTCCCGGCCTGCCCCAGATACAGTTCTACGATACAGCCTTGTTTGACTGGGCG TCTGAGCTTGAGGCCAAGGCAGATCAGATCCGGGAGGAGCTGATCTCTGTGATGACGGAAACGGGGACGTTTTCGCCTTA TCTGTCGGAGGAAGACACCGCCCGTCCGCATGTCCGGTCGCACACGTTGCAGGGCAGCCTGGATTGGGCTGCCTATTACA TCTGGAAGGATGGAGCGCGTGTCGAAGACAATGCGCGCCGATGCCCGGTGACCGCAGCGGCCTTTGAGAACGTGCCGCTG GATTTCCTGACCGGTCAGGCGCCATCGGTTCTGTTTTCGAGATTGAAGCCGGGTGCTCATATTCCGCCTCACCACGGGCT GGTGAACACACGGCTCATCGGGCACCTGCCCCTGCTTGTACCCGGTCCGGCCTGGCTACGGGTTGGAAATCAGGTGCATC ACTGGCAGGAGGGCCAGCTGGTGATCTTCGACGATTCCATAGAGCACGAGGCGAAGAATGAAGCTGACGAGACACGCGTG GTGCTGCTGTTCGACTTCTGGAAACCGGAAATCACGTTGAAGGAGCGCGAGCAGATTGCTGCGCTTACCGCCGCCATTTC TGACTACTCAGGAGATGCAATAGCGCGTGCGGACTGA
Upstream 100 bases:
>100_bases TTGCTGTGTCATGGCCTCTATTAGCGGGGGTTTTCCTGTCGCGAAAGGCCGTCAAACGCGGCATTTGCCTATTTGGGCAG GAAGGCTTTAGCTAAGCGGC
Downstream 100 bases:
>100_bases TCGCTAGGCGCTTCGCCGCAGGACAGCGAAGAAAAAGCCGTCCGTGCTGGCCCTGAGAGGTGTCAGCCGGACGCTGCCTG TCGGGCCACGATACTTCCGC
Product: beta-hydroxylase
Products: NA
Alternate protein names: Beta-Hydroxylase; Asparaginyl Beta-Hydroxylase; Beta-Hydroxylase Aspartyl/Asparaginyl Family; Aspartyl/Asparaginyl Beta-Hydroxylase Family Protein; Peptide-Aspartate Beta-Dioxygenase; Peptide Aspartate B-Dioxygenase; Aspartyl/Asparaginyl-Beta-Hydroxylase; Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Family; Beta-Hydroxylase Aspartyl/Asparaginyl Family Protein
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MTAPLETVPQLIARARQALQAGGNPQMAVDAINEALKQAPRDIGLILYLGDAHHAAGQKSDAGHAYGIGLKLAAQINPVS IPDGIRQALQRAEARRAEYSAAYESFLRARLPGSEKETRFDQALEILLGRRQIYVQQPTKFYFPGLPQIQFYDTALFDWA SELEAKADQIREELISVMTETGTFSPYLSEEDTARPHVRSHTLQGSLDWAAYYIWKDGARVEDNARRCPVTAAAFENVPL DFLTGQAPSVLFSRLKPGAHIPPHHGLVNTRLIGHLPLLVPGPAWLRVGNQVHHWQEGQLVIFDDSIEHEAKNEADETRV VLLFDFWKPEITLKEREQIAALTAAISDYSGDAIARAD
Sequences:
>Translated_358_residues MTAPLETVPQLIARARQALQAGGNPQMAVDAINEALKQAPRDIGLILYLGDAHHAAGQKSDAGHAYGIGLKLAAQINPVS IPDGIRQALQRAEARRAEYSAAYESFLRARLPGSEKETRFDQALEILLGRRQIYVQQPTKFYFPGLPQIQFYDTALFDWA SELEAKADQIREELISVMTETGTFSPYLSEEDTARPHVRSHTLQGSLDWAAYYIWKDGARVEDNARRCPVTAAAFENVPL DFLTGQAPSVLFSRLKPGAHIPPHHGLVNTRLIGHLPLLVPGPAWLRVGNQVHHWQEGQLVIFDDSIEHEAKNEADETRV VLLFDFWKPEITLKEREQIAALTAAISDYSGDAIARAD >Mature_357_residues TAPLETVPQLIARARQALQAGGNPQMAVDAINEALKQAPRDIGLILYLGDAHHAAGQKSDAGHAYGIGLKLAAQINPVSI PDGIRQALQRAEARRAEYSAAYESFLRARLPGSEKETRFDQALEILLGRRQIYVQQPTKFYFPGLPQIQFYDTALFDWAS ELEAKADQIREELISVMTETGTFSPYLSEEDTARPHVRSHTLQGSLDWAAYYIWKDGARVEDNARRCPVTAAAFENVPLD FLTGQAPSVLFSRLKPGAHIPPHHGLVNTRLIGHLPLLVPGPAWLRVGNQVHHWQEGQLVIFDDSIEHEAKNEADETRVV LLFDFWKPEITLKEREQIAALTAAISDYSGDAIARAD
Specific function: Unknown
COG id: COG3555
COG function: function code O; Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI14589866, Length=192, Percent_Identity=30.2083333333333, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI258613943, Length=192, Percent_Identity=30.2083333333333, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI194328779, Length=213, Percent_Identity=26.2910798122066, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17568771, Length=193, Percent_Identity=26.9430051813472, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193210573, Length=193, Percent_Identity=26.9430051813472, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193210571, Length=193, Percent_Identity=26.9430051813472, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24654024, Length=175, Percent_Identity=34.8571428571429, Blast_Score=107, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39754; Mature: 39623
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPLETVPQLIARARQALQAGGNPQMAVDAINEALKQAPRDIGLILYLGDAHHAAGQKS CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHCCCCCC DAGHAYGIGLKLAAQINPVSIPDGIRQALQRAEARRAEYSAAYESFLRARLPGSEKETRF CCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH DQALEILLGRRQIYVQQPTKFYFPGLPQIQFYDTALFDWASELEAKADQIREELISVMTE HHHHHHHHCCCEEEEECCCEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGTFSPYLSEEDTARPHVRSHTLQGSLDWAAYYIWKDGARVEDNARRCPVTAAAFENVPL CCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEHHHHCCCCH DFLTGQAPSVLFSRLKPGAHIPPHHGLVNTRLIGHLPLLVPGPAWLRVGNQVHHWQEGQL HHHCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCEEECCHHHHHCCCHHCCCCCCEE VIFDDSIEHEAKNEADETRVVLLFDFWKPEITLKEREQIAALTAAISDYSGDAIARAD EEEECCCCHHHCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCCEEECCC >Mature Secondary Structure TAPLETVPQLIARARQALQAGGNPQMAVDAINEALKQAPRDIGLILYLGDAHHAAGQKS CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHCCCCCC DAGHAYGIGLKLAAQINPVSIPDGIRQALQRAEARRAEYSAAYESFLRARLPGSEKETRF CCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH DQALEILLGRRQIYVQQPTKFYFPGLPQIQFYDTALFDWASELEAKADQIREELISVMTE HHHHHHHHCCCEEEEECCCEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGTFSPYLSEEDTARPHVRSHTLQGSLDWAAYYIWKDGARVEDNARRCPVTAAAFENVPL CCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEHHHHCCCCH DFLTGQAPSVLFSRLKPGAHIPPHHGLVNTRLIGHLPLLVPGPAWLRVGNQVHHWQEGQL HHHCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCEEECCHHHHHCCCHHCCCCCCEE VIFDDSIEHEAKNEADETRVVLLFDFWKPEITLKEREQIAALTAAISDYSGDAIARAD EEEECCCCHHHCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA