| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is hisA
Identifier: 114797166
GI number: 114797166
Start: 56214
End: 56939
Strand: Reverse
Name: hisA
Synonym: HNE_0070
Alternate gene names: 114797166
Gene position: 56939-56214 (Counterclockwise)
Preceding gene: 114798251
Following gene: 114797557
Centisome position: 1.54
GC content: 67.77
Gene sequence:
>726_bases ATGACCTTCACCCTCTATCCCGCCATTGACCTGAAAGACGGCGCCTGCGTGCGCCTCCTGCGCGGGGAGATGGACGCGGC CACCGTGTTCAACACGGACCCCGCCGACCAGGCCCGCGCCTTTCATGCGATGGGCTTCACCCATCTGCATGTGGTGGACC TCAACGGGGCGTTCGCCGGCGCGCCGGTCAACCGCGCGGCCGTCGAAGGCATCCTGAAGGCCACCCCTGCCCCGGTACAG CTGGGCGGTGGCATCCGCACGCGGGCGCAGATTGATGCCTGGCTGGAAGCGGGCATCAGCCGCGTCATCCTCGGCACCAT TGCCCTGCGCGACCCCGAACTGGTGAAAACAGCTGCCCGCGCGCTGCCCGGCCGCATCGTGGTGGGGATCGACGCGAAGG ATGGCATGGTGGCCGTGGAAGGCTGGGCCGAGACCAGCGACATGAAGGCGACCGAGCTTGCCAAGGCGTTTGAAGGCTGC GGCGTGGCCGCCATCGTCGCCACCGACATTGGCCGCGACGGACTGAAAACCGGCGTCAATGTTCCGTTCACGGCAGAGCT CGCCCACGCCGTCTCCATCCCCGTCATCGCCTCCGGCGGCGTGCGCGACGTGAACGACATCCGTGCCCTGAAGGCTTCGG GCGCACCGATTGCGGGGTCTATCCTGGGGCGGGCGCTGTATGATGGGGATATTGTGGCGAGCGAGGCGATTGAGGCGGCG GGTTAG
Upstream 100 bases:
>100_bases CCGCCATCGCGCGCGACAACCTCATCGGCACGCAATTCCATCCCGAAAAGAGCCAGCGCCTCGGCCTGACGCTGCTCGCC AACTTCCTGAAATGGCACCC
Downstream 100 bases:
>100_bases GCTAAGGAACCTAACCCGCCGGTGGCTCATGTCGTGTGACACGCCAGCGAGCAGTAATAACACCCGTTGGACTGCCAATA TGATTCTTTAGCCTTTCGCA
Product: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MTFTLYPAIDLKDGACVRLLRGEMDAATVFNTDPADQARAFHAMGFTHLHVVDLNGAFAGAPVNRAAVEGILKATPAPVQ LGGGIRTRAQIDAWLEAGISRVILGTIALRDPELVKTAARALPGRIVVGIDAKDGMVAVEGWAETSDMKATELAKAFEGC GVAAIVATDIGRDGLKTGVNVPFTAELAHAVSIPVIASGGVRDVNDIRALKASGAPIAGSILGRALYDGDIVASEAIEAA G
Sequences:
>Translated_241_residues MTFTLYPAIDLKDGACVRLLRGEMDAATVFNTDPADQARAFHAMGFTHLHVVDLNGAFAGAPVNRAAVEGILKATPAPVQ LGGGIRTRAQIDAWLEAGISRVILGTIALRDPELVKTAARALPGRIVVGIDAKDGMVAVEGWAETSDMKATELAKAFEGC GVAAIVATDIGRDGLKTGVNVPFTAELAHAVSIPVIASGGVRDVNDIRALKASGAPIAGSILGRALYDGDIVASEAIEAA G >Mature_240_residues TFTLYPAIDLKDGACVRLLRGEMDAATVFNTDPADQARAFHAMGFTHLHVVDLNGAFAGAPVNRAAVEGILKATPAPVQL GGGIRTRAQIDAWLEAGISRVILGTIALRDPELVKTAARALPGRIVVGIDAKDGMVAVEGWAETSDMKATELAKAFEGCG VAAIVATDIGRDGLKTGVNVPFTAELAHAVSIPVIASGGVRDVNDIRALKASGAPIAGSILGRALYDGDIVASEAIEAAG
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=240, Percent_Identity=35, Blast_Score=131, Evalue=3e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_HYPNA (Q0C639)
Other databases:
- EMBL: CP000158 - RefSeq: YP_758804.1 - ProteinModelPortal: Q0C639 - SMR: Q0C639 - STRING: Q0C639 - GeneID: 4287625 - GenomeReviews: CP000158_GR - KEGG: hne:HNE_0070 - NMPDR: fig|228405.5.peg.69 - TIGR: HNE_0070 - eggNOG: COG0106 - HOGENOM: HBG541613 - OMA: SIIYTDI - PhylomeDB: Q0C639 - ProtClustDB: CLSK2531615 - BioCyc: HNEP81032:HNE_0070-MONOMER - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00007
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 24734; Mature: 24602
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: ACT_SITE 10-10 ACT_SITE 131-131
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFTLYPAIDLKDGACVRLLRGEMDAATVFNTDPADQARAFHAMGFTHLHVVDLNGAFAG CEEEEEEEEECCCCCEEHHHHCCCCEEEEECCCCHHHHHHHHHCCCEEEEEEECCCCCCC APVNRAAVEGILKATPAPVQLGGGIRTRAQIDAWLEAGISRVILGTIALRDPELVKTAAR CCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHH ALPGRIVVGIDAKDGMVAVEGWAETSDMKATELAKAFEGCGVAAIVATDIGRDGLKTGVN HCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHCCCC VPFTAELAHAVSIPVIASGGVRDVNDIRALKASGAPIAGSILGRALYDGDIVASEAIEAA CCCHHHHHHHEECCEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHCC G C >Mature Secondary Structure TFTLYPAIDLKDGACVRLLRGEMDAATVFNTDPADQARAFHAMGFTHLHVVDLNGAFAG EEEEEEEEECCCCCEEHHHHCCCCEEEEECCCCHHHHHHHHHCCCEEEEEEECCCCCCC APVNRAAVEGILKATPAPVQLGGGIRTRAQIDAWLEAGISRVILGTIALRDPELVKTAAR CCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHH ALPGRIVVGIDAKDGMVAVEGWAETSDMKATELAKAFEGCGVAAIVATDIGRDGLKTGVN HCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHCCCC VPFTAELAHAVSIPVIASGGVRDVNDIRALKASGAPIAGSILGRALYDGDIVASEAIEAA CCCHHHHHHHEECCEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHCC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA