Click here to switch to the map view.

The map label for this gene is yraN [C]

Identifier: 114797099

GI number: 114797099

Start: 772698

End: 773066

Strand: Direct

Name: yraN [C]

Synonym: HNE_0764

Alternate gene names: 114797099

Gene position: 772698-773066 (Clockwise)

Preceding gene: 114797084

Following gene: 114797969

Centisome position: 20.86

GC content: 68.56

Gene sequence:

>369_bases
ATGCCGGCTAAGCGCCAGATTGCCGAGGCAAGGGGGCGCCAGGCCGAGCGCCGCGCCGCGCTCTGGCTGCGCCTCAAGGG
CTGTTCCGTTCTCGCCGCGCGCGTAAAACTTCCGGGCGGCGAGATCGACCTGATCGCCCGCAAGGGCCGCCTCATTGCGT
TTGTCGAGGTGAAAGCCCGCGCCCGGCGCGATGATGCCCTCGGCGCGGTCAGTGTCCAATCCTGGCACCGCATCGCCCGC
GCCGCCGAAGTCTGGATGGGCCATCGCCCGAAATTTGCCGGGTATGGCTGGCGCTACGACCTCATCGCCCTGGCTCCGGG
CAGCCTGCCTTATCATCTCAAAGATGCCTGGCGGCCCGGCCTGGCGTAA

Upstream 100 bases:

>100_bases
CTCACCATGCCCACCAAGGACGCCGCCACCAGCGTCGCCGAAGCCCTCGGCCTGCCGCGCCGCGACGTCTATCAGCGCGC
CCTCCAGCTCAAATCGGAAA

Downstream 100 bases:

>100_bases
AAAGAGTTGATCAAATTCCGCGCTTGTCTAGGACTGGCGCTCTGGCGCAATTCCACGGGGACGGGATTTTCGCGATCTGG
TTTGAAACTTGCTTTGACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MPAKRQIAEARGRQAERRAALWLRLKGCSVLAARVKLPGGEIDLIARKGRLIAFVEVKARARRDDALGAVSVQSWHRIAR
AAEVWMGHRPKFAGYGWRYDLIALAPGSLPYHLKDAWRPGLA

Sequences:

>Translated_122_residues
MPAKRQIAEARGRQAERRAALWLRLKGCSVLAARVKLPGGEIDLIARKGRLIAFVEVKARARRDDALGAVSVQSWHRIAR
AAEVWMGHRPKFAGYGWRYDLIALAPGSLPYHLKDAWRPGLA
>Mature_121_residues
PAKRQIAEARGRQAERRAALWLRLKGCSVLAARVKLPGGEIDLIARKGRLIAFVEVKARARRDDALGAVSVQSWHRIARA
AEVWMGHRPKFAGYGWRYDLIALAPGSLPYHLKDAWRPGLA

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

Organism=Escherichia coli, GI1789538, Length=107, Percent_Identity=35.5140186915888, Blast_Score=60, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y764_HYPNA (Q0C451)

Other databases:

- EMBL:   CP000158
- RefSeq:   YP_759492.1
- ProteinModelPortal:   Q0C451
- STRING:   Q0C451
- GeneID:   4287966
- GenomeReviews:   CP000158_GR
- KEGG:   hne:HNE_0764
- NMPDR:   fig|228405.5.peg.747
- TIGR:   HNE_0764
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   DIWLARQ
- PhylomeDB:   Q0C451
- ProtClustDB:   CLSK2531594
- BioCyc:   HNEP81032:HNE_0764-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 13634; Mature: 13503

Theoretical pI: Translated: 11.78; Mature: 11.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAKRQIAEARGRQAERRAALWLRLKGCSVLAARVKLPGGEIDLIARKGRLIAFVEVKAR
CCCHHHHHHHHCCHHHHHHEEEEEECCCEEEEEEEECCCCCEEEEEECCCEEEEEEEECC
ARRDDALGAVSVQSWHRIARAAEVWMGHRPKFAGYGWRYDLIALAPGSLPYHLKDAWRPG
CCCCCCCCEECHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCHHCCCCC
LA
CC
>Mature Secondary Structure 
PAKRQIAEARGRQAERRAALWLRLKGCSVLAARVKLPGGEIDLIARKGRLIAFVEVKAR
CCHHHHHHHHCCHHHHHHEEEEEECCCEEEEEEEECCCCCEEEEEECCCEEEEEEEECC
ARRDDALGAVSVQSWHRIARAAEVWMGHRPKFAGYGWRYDLIALAPGSLPYHLKDAWRPG
CCCCCCCCEECHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCHHCCCCC
LA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA