Click here to switch to the map view.

The map label for this gene is rsmI [H]

Identifier: 114797084

GI number: 114797084

Start: 771833

End: 772708

Strand: Direct

Name: rsmI [H]

Synonym: HNE_0763

Alternate gene names: 114797084

Gene position: 771833-772708 (Clockwise)

Preceding gene: 114799760

Following gene: 114797099

Centisome position: 20.83

GC content: 66.89

Gene sequence:

>876_bases
ATGAGCGCCGCTGGCGGCGGGCAACAGCCCGTTGCCGTTTCTCCGGGCCTGTATGTTGTTTCCACCCCGATCGGCAACCT
CCGAGACATCACCCTTCGCGCGCTGGACATCCTGTCCGCTGCCGATGAGGTGCTGGCCGAAGACACCCGCGTGGCGGGAA
AGCTTATGTCCGCCTACGGGATTAAAGCCCGCCTCAGCCCTTACCATGACCATAATGGGGCCGAACGGAGACCGCAGATC
CTTTCCCGCCTCGCCGATGGCGGCCGCATTGCCCTGATTTCTGACGCCGGCACGCCGCTGATCTCCGATCCGGGCTGGAA
ACTGGTGCATGACGCCCTCGAAGCGGGCCACAAGGTCTATCCTGTGCCCGGCGCCTCGGCGCTCCTTGCCGGGCTCGTTG
CGTCCGGCCTGCCCAGCGACCGGTTCATGTTCGCCGGCTTCCTGCCGCCCAAATCCGGCGCCCGCAAAGCCGCGCTTGAA
ACGCTCAAACATGTTCCCGGCACGCTCGTCTTCTATGAAAGCGGCCCGCGCCTGGCCGAAAGCCTCGCCGATCTCGCCGC
CGTCCTCGGAGGCGGCCGCACCGCCGCCGTCGCCCGCGAGCTGACCAAGCTGTTTGAAGAAACCCGCCGCGGCACGCTCA
CCAGCCTCGCCGAACATTATCAAACCGCCGGTCCCCCGCGCGGCGAAATCGTCATCCTCACCGGCCCGCCCGAAGAAAAG
ACCTCCACGCCCGGTGATCTCGACGCTGCCTTGCGCGACGCGCTCCTCACCATGCCCACCAAGGACGCCGCCACCAGCGT
CGCCGAAGCCCTCGGCCTGCCGCGCCGCGACGTCTATCAGCGCGCCCTCCAGCTCAAATCGGAAAATGCCGGCTAA

Upstream 100 bases:

>100_bases
AGCACAAGGCTTGGCGCCCGCAGTTTCCTGAGTAAGGGTGGCAACAATGTCATCTTCCGATCCTTCCGACGCCAGTTCGA
ATCCAGCCAAGGGCGACTCT

Downstream 100 bases:

>100_bases
GCGCCAGATTGCCGAGGCAAGGGGGCGCCAGGCCGAGCGCCGCGCCGCGCTCTGGCTGCGCCTCAAGGGCTGTTCCGTTC
TCGCCGCGCGCGTAAAACTT

Product: tetrapyrrole methylase family protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MSAAGGGQQPVAVSPGLYVVSTPIGNLRDITLRALDILSAADEVLAEDTRVAGKLMSAYGIKARLSPYHDHNGAERRPQI
LSRLADGGRIALISDAGTPLISDPGWKLVHDALEAGHKVYPVPGASALLAGLVASGLPSDRFMFAGFLPPKSGARKAALE
TLKHVPGTLVFYESGPRLAESLADLAAVLGGGRTAAVARELTKLFEETRRGTLTSLAEHYQTAGPPRGEIVILTGPPEEK
TSTPGDLDAALRDALLTMPTKDAATSVAEALGLPRRDVYQRALQLKSENAG

Sequences:

>Translated_291_residues
MSAAGGGQQPVAVSPGLYVVSTPIGNLRDITLRALDILSAADEVLAEDTRVAGKLMSAYGIKARLSPYHDHNGAERRPQI
LSRLADGGRIALISDAGTPLISDPGWKLVHDALEAGHKVYPVPGASALLAGLVASGLPSDRFMFAGFLPPKSGARKAALE
TLKHVPGTLVFYESGPRLAESLADLAAVLGGGRTAAVARELTKLFEETRRGTLTSLAEHYQTAGPPRGEIVILTGPPEEK
TSTPGDLDAALRDALLTMPTKDAATSVAEALGLPRRDVYQRALQLKSENAG
>Mature_290_residues
SAAGGGQQPVAVSPGLYVVSTPIGNLRDITLRALDILSAADEVLAEDTRVAGKLMSAYGIKARLSPYHDHNGAERRPQIL
SRLADGGRIALISDAGTPLISDPGWKLVHDALEAGHKVYPVPGASALLAGLVASGLPSDRFMFAGFLPPKSGARKAALET
LKHVPGTLVFYESGPRLAESLADLAAVLGGGRTAAVARELTKLFEETRRGTLTSLAEHYQTAGPPRGEIVILTGPPEEKT
STPGDLDAALRDALLTMPTKDAATSVAEALGLPRRDVYQRALQLKSENAG

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=273, Percent_Identity=46.8864468864469, Blast_Score=211, Evalue=5e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 30423; Mature: 30292

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAGGGQQPVAVSPGLYVVSTPIGNLRDITLRALDILSAADEVLAEDTRVAGKLMSAYG
CCCCCCCCCCEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IKARLSPYHDHNGAERRPQILSRLADGGRIALISDAGTPLISDPGWKLVHDALEAGHKVY
CHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEE
PVPGASALLAGLVASGLPSDRFMFAGFLPPKSGARKAALETLKHVPGTLVFYESGPRLAE
CCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHH
SLADLAAVLGGGRTAAVARELTKLFEETRRGTLTSLAEHYQTAGPPRGEIVILTGPPEEK
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCCC
TSTPGDLDAALRDALLTMPTKDAATSVAEALGLPRRDVYQRALQLKSENAG
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SAAGGGQQPVAVSPGLYVVSTPIGNLRDITLRALDILSAADEVLAEDTRVAGKLMSAYG
CCCCCCCCCEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IKARLSPYHDHNGAERRPQILSRLADGGRIALISDAGTPLISDPGWKLVHDALEAGHKVY
CHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEE
PVPGASALLAGLVASGLPSDRFMFAGFLPPKSGARKAALETLKHVPGTLVFYESGPRLAE
CCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHH
SLADLAAVLGGGRTAAVARELTKLFEETRRGTLTSLAEHYQTAGPPRGEIVILTGPPEEK
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCCC
TSTPGDLDAALRDALLTMPTKDAATSVAEALGLPRRDVYQRALQLKSENAG
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]